CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = R594R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13594R594RR5918RsyncgTcgC11753117450.99931918016-18018
ORF1ab/nsp13594R594RR5918RsyncgTcgG1175380.00068067718016-18018

Details of the mutation R594R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13594R594RcgTcgC1174511753All0.002246
ORF1ab/nsp13594R594RcgTcgG811753All0.000002
ORF1ab/nsp13594R594RcgTcgC1074610746B.1.1.70.00962
ORF1ab/nsp13594R594RcgTcgC884884Q.70.982222
ORF1ab/nsp13594R594RcgTcgC1313B.1.10.000236
ORF1ab/nsp13594R594RcgTcgC1010Q.10.001263
ORF1ab/nsp13594R594RcgTcgC79B.1.617.20.000026
ORF1ab/nsp13594R594RcgTcgG29B.1.617.20.000008
ORF1ab/nsp13594R594RcgTcgC88B.1.1.1530.008762
ORF1ab/nsp13594R594RcgTcgC88B.1.2430.000557
ORF1ab/nsp13594R594RcgTcgC77B.1.177.20.031818
ORF1ab/nsp13594R594RcgTcgC66AY.250.000036
ORF1ab/nsp13594R594RcgTcgC56AY.440.00003
ORF1ab/nsp13594R594RcgTcgG16AY.440.000006
ORF1ab/nsp13594R594RcgTcgG45AY.1000.000184
ORF1ab/nsp13594R594RcgTcgC15AY.1000.000046
ORF1ab/nsp13594R594RcgTcgC55AY.40.000008
ORF1ab/nsp13594R594RcgTcgC55AY.430.000022
ORF1ab/nsp13594R594RcgTcgC44AY.330.000267
ORF1ab/nsp13594R594RcgTcgC44B.1.3110.001098
ORF1ab/nsp13594R594RcgTcgC33AY.200.000117
ORF1ab/nsp13594R594RcgTcgC33B.10.000027
ORF1ab/nsp13594R594RcgTcgC22AY.1140.000462
ORF1ab/nsp13594R594RcgTcgC22AY.46.30.001867
ORF1ab/nsp13594R594RcgTcgC22AY.470.000062
ORF1ab/nsp13594R594RcgTcgC11A.2.40.003367
ORF1ab/nsp13594R594RcgTcgC11AY.1030.000006
ORF1ab/nsp13594R594RcgTcgC11AY.1170.000085
ORF1ab/nsp13594R594RcgTcgC11AY.120.10.000321
ORF1ab/nsp13594R594RcgTcgG11AY.230.00007
ORF1ab/nsp13594R594RcgTcgC11AY.260.000028
ORF1ab/nsp13594R594RcgTcgC11AY.360.000148
ORF1ab/nsp13594R594RcgTcgC11AY.390.000025
ORF1ab/nsp13594R594RcgTcgC11AY.4.20.000022
ORF1ab/nsp13594R594RcgTcgC11AY.570.000656
ORF1ab/nsp13594R594RcgTcgC11AY.610.000105
ORF1ab/nsp13594R594RcgTcgC11B.1.1.5190.00004
ORF1ab/nsp13594R594RcgTcgC11B.1.214.20.0006
ORF1ab/nsp13594R594RcgTcgC11B.1.3510.00003
ORF1ab/nsp13594R594RcgTcgC11B.1.360.000146
ORF1ab/nsp13594R594RcgTcgC11B.1.438.10.000107
ORF1ab/nsp13594R594RcgTcgC11B.1.5260.000024
ORF1ab/nsp13594R594RcgTcgC11B.1.6200.000946
ORF1ab/nsp13594R594RcgTcgC11C.370.000116
ORF1ab/nsp13594R594RcgTcgC11P.1.100.000269
ORF1ab/nsp13594R594RcgTcgC11Q.80.000165