CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = R392L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13392R392LR5716LnonsyncGtcTt422422117410-17412

Details of the mutation R392L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13392R392LcGtcTt422422All0.000081
ORF1ab/nsp13392R392LcGtcTt9595B.1.1600.002963
ORF1ab/nsp13392R392LcGtcTt8484AY.440.000511
ORF1ab/nsp13392R392LcGtcTt5353B.1.1.70.000047
ORF1ab/nsp13392R392LcGtcTt4242AY.40.000065
ORF1ab/nsp13392R392LcGtcTt1515AY.50.00031
ORF1ab/nsp13392R392LcGtcTt1313B.1.36.180.005462
ORF1ab/nsp13392R392LcGtcTt1212B.1.617.20.000045
ORF1ab/nsp13392R392LcGtcTt1111AY.1030.000068
ORF1ab/nsp13392R392LcGtcTt99AY.430.00004
ORF1ab/nsp13392R392LcGtcTt88B.1.20.00007
ORF1ab/nsp13392R392LcGtcTt77B.1.1770.000092
ORF1ab/nsp13392R392LcGtcTt66AY.9.10.000502
ORF1ab/nsp13392R392LcGtcTt66B.1.36.290.003104
ORF1ab/nsp13392R392LcGtcTt55AY.30.00005
ORF1ab/nsp13392R392LcGtcTt44B.10.000037
ORF1ab/nsp13392R392LcGtcTt44B.1.10.000073
ORF1ab/nsp13392R392LcGtcTt44B.1.4290.000094
ORF1ab/nsp13392R392LcGtcTt44P.10.000063
ORF1ab/nsp13392R392LcGtcTt33B.1.36.170.001482
ORF1ab/nsp13392R392LcGtcTt22AY.1110.000366
ORF1ab/nsp13392R392LcGtcTt22AY.250.000012
ORF1ab/nsp13392R392LcGtcTt22AY.740.000231
ORF1ab/nsp13392R392LcGtcTt22B.1.258.170.000208
ORF1ab/nsp13392R392LcGtcTt22B.1.6210.000177
ORF1ab/nsp13392R392LcGtcTt11AY.1000.000046
ORF1ab/nsp13392R392LcGtcTt11AY.110.001339
ORF1ab/nsp13392R392LcGtcTt11AY.29.10.000221
ORF1ab/nsp13392R392LcGtcTt11AY.390.000025
ORF1ab/nsp13392R392LcGtcTt11AY.39.10.00004
ORF1ab/nsp13392R392LcGtcTt11AY.4.20.000022
ORF1ab/nsp13392R392LcGtcTt11AY.540.000095
ORF1ab/nsp13392R392LcGtcTt11AY.7.10.000113
ORF1ab/nsp13392R392LcGtcTt11AY.9.20.000037
ORF1ab/nsp13392R392LcGtcTt11B.1.1.1760.000439
ORF1ab/nsp13392R392LcGtcTt11B.1.1.2290.005747
ORF1ab/nsp13392R392LcGtcTt11B.1.1.2690.001353
ORF1ab/nsp13392R392LcGtcTt11B.1.1.3190.017544
ORF1ab/nsp13392R392LcGtcTt11B.1.1.5190.00004
ORF1ab/nsp13392R392LcGtcTt11B.1.1.630.000386
ORF1ab/nsp13392R392LcGtcTt11B.1.177.460.000918
ORF1ab/nsp13392R392LcGtcTt11B.1.177.810.000189
ORF1ab/nsp13392R392LcGtcTt11B.1.177.860.000183
ORF1ab/nsp13392R392LcGtcTt11B.1.2400.000216
ORF1ab/nsp13392R392LcGtcTt11B.1.2580.000067
ORF1ab/nsp13392R392LcGtcTt11B.1.3510.00003
ORF1ab/nsp13392R392LcGtcTt11B.1.360.000146
ORF1ab/nsp13392R392LcGtcTt11B.1.4160.001269
ORF1ab/nsp13392R392LcGtcTt11B.1.5970.00463
ORF1ab/nsp13392R392LcGtcTt11B.1.617.30.002985
ORF1ab/nsp13392R392LcGtcTt11B.1.6370.000073
ORF1ab/nsp13392R392LcGtcTt11P.1.20.001156