CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = R337R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13337R337RR5661RsyncgTcgC285726690.93419717245-17247
ORF1ab/nsp13337R337RR5661RsyncgTcgA28571010.035351817245-17247
ORF1ab/nsp13337R337RR5661RsyncgTcgG2857870.030451517245-17247

Details of the mutation R337R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13337R337RcgTcgC26692857All0.00051
ORF1ab/nsp13337R337RcgTcgA1012857All0.000019
ORF1ab/nsp13337R337RcgTcgG872857All0.000017
ORF1ab/nsp13337R337RcgTcgC15091516B0.192868
ORF1ab/nsp13337R337RcgTcgG71516B0.000895
ORF1ab/nsp13337R337RcgTcgC423423B.390.986014
ORF1ab/nsp13337R337RcgTcgC125125B.350.976562
ORF1ab/nsp13337R337RcgTcgA86120B.1.1.70.000077
ORF1ab/nsp13337R337RcgTcgC32120B.1.1.70.000029
ORF1ab/nsp13337R337RcgTcgG2120B.1.1.70.000002
ORF1ab/nsp13337R337RcgTcgC9898B.581
ORF1ab/nsp13337R337RcgTcgC7272B.340.986301
ORF1ab/nsp13337R337RcgTcgC5359AY.40.000082
ORF1ab/nsp13337R337RcgTcgG559AY.40.000008
ORF1ab/nsp13337R337RcgTcgA159AY.40.000002
ORF1ab/nsp13337R337RcgTcgC4747B.331
ORF1ab/nsp13337R337RcgTcgG4143AY.250.000247
ORF1ab/nsp13337R337RcgTcgC243AY.250.000012
ORF1ab/nsp13337R337RcgTcgC4242B.381
ORF1ab/nsp13337R337RcgTcgC4040AY.530.011501
ORF1ab/nsp13337R337RcgTcgC3737B.321
ORF1ab/nsp13337R337RcgTcgC3030B.370.857143
ORF1ab/nsp13337R337RcgTcgG2222AY.1100.002479
ORF1ab/nsp13337R337RcgTcgC1617B.1.20.000141
ORF1ab/nsp13337R337RcgTcgG117B.1.20.000009
ORF1ab/nsp13337R337RcgTcgC1516B.10.000137
ORF1ab/nsp13337R337RcgTcgA116B.10.000009
ORF1ab/nsp13337R337RcgTcgC1115B.1.617.20.000041
ORF1ab/nsp13337R337RcgTcgA315B.1.617.20.000011
ORF1ab/nsp13337R337RcgTcgG115B.1.617.20.000004
ORF1ab/nsp13337R337RcgTcgC1313P.10.000205
ORF1ab/nsp13337R337RcgTcgC1010B.360.769231
ORF1ab/nsp13337R337RcgTcgC79AY.30.00007
ORF1ab/nsp13337R337RcgTcgG29AY.30.00002
ORF1ab/nsp13337R337RcgTcgC88B.1.360.001167
ORF1ab/nsp13337R337RcgTcgC67AY.430.000027
ORF1ab/nsp13337R337RcgTcgG17AY.430.000004
ORF1ab/nsp13337R337RcgTcgC77B.1.10.000127
ORF1ab/nsp13337R337RcgTcgA46AY.1030.000025
ORF1ab/nsp13337R337RcgTcgC26AY.1030.000012
ORF1ab/nsp13337R337RcgTcgC66B.1.177.70.000989
ORF1ab/nsp13337R337RcgTcgC44B.1.1.5190.000159
ORF1ab/nsp13337R337RcgTcgC33AY.680.000821
ORF1ab/nsp13337R337RcgTcgA23B.1.4290.000047
ORF1ab/nsp13337R337RcgTcgC13B.1.4290.000024
ORF1ab/nsp13337R337RcgTcgC22AY.1210.000271
ORF1ab/nsp13337R337RcgTcgC22AY.230.000139
ORF1ab/nsp13337R337RcgTcgC22AY.290.000032
ORF1ab/nsp13337R337RcgTcgC12AY.390.000025
ORF1ab/nsp13337R337RcgTcgG12AY.390.000025
ORF1ab/nsp13337R337RcgTcgC12AY.440.000006
ORF1ab/nsp13337R337RcgTcgA12AY.440.000006
ORF1ab/nsp13337R337RcgTcgC22AY.840.000875
ORF1ab/nsp13337R337RcgTcgC22B.1.1.4480.004065
ORF1ab/nsp13337R337RcgTcgC22B.1.2210.000142
ORF1ab/nsp13337R337RcgTcgC22B.1.5260.000047
ORF1ab/nsp13337R337RcgTcgC22B.550.0059
ORF1ab/nsp13337R337RcgTcgC11A0.000387
ORF1ab/nsp13337R337RcgTcgC11A.20.000662
ORF1ab/nsp13337R337RcgTcgC11A.2.30.004739
ORF1ab/nsp13337R337RcgTcgC11A.220.066667
ORF1ab/nsp13337R337RcgTcgC11AU.10.001266
ORF1ab/nsp13337R337RcgTcgC11AY.240.000431
ORF1ab/nsp13337R337RcgTcgC11AY.260.000028
ORF1ab/nsp13337R337RcgTcgC11AY.330.000067
ORF1ab/nsp13337R337RcgTcgC11AY.4.20.000022
ORF1ab/nsp13337R337RcgTcgG11AY.4.50.000107
ORF1ab/nsp13337R337RcgTcgC11AY.420.00004
ORF1ab/nsp13337R337RcgTcgC11AY.50.000021
ORF1ab/nsp13337R337RcgTcgC11AY.700.000209
ORF1ab/nsp13337R337RcgTcgG11AY.940.000443
ORF1ab/nsp13337R337RcgTcgC11B.1.1.1360.021277
ORF1ab/nsp13337R337RcgTcgC11B.1.1.2980.000862
ORF1ab/nsp13337R337RcgTcgC11B.1.1.3720.000689
ORF1ab/nsp13337R337RcgTcgC11B.1.1.3970.002252
ORF1ab/nsp13337R337RcgTcgG11B.1.1600.000031
ORF1ab/nsp13337R337RcgTcgC11B.1.2150.009615
ORF1ab/nsp13337R337RcgTcgA11B.1.2320.000537
ORF1ab/nsp13337R337RcgTcgC11B.1.2430.00007
ORF1ab/nsp13337R337RcgTcgC11B.1.2580.000067
ORF1ab/nsp13337R337RcgTcgC11B.1.3510.00003
ORF1ab/nsp13337R337RcgTcgC11B.1.36.380.001642
ORF1ab/nsp13337R337RcgTcgC11B.1.36.80.001
ORF1ab/nsp13337R337RcgTcgG11B.1.5250.000113
ORF1ab/nsp13337R337RcgTcgC11B.1.5610.000397
ORF1ab/nsp13337R337RcgTcgC11B.1.5900.004545
ORF1ab/nsp13337R337RcgTcgC11B.1.5960.000087
ORF1ab/nsp13337R337RcgTcgC11B.1.6270.00202
ORF1ab/nsp13337R337RcgTcgA11B.1.6370.000073
ORF1ab/nsp13337R337RcgTcgC11B.1.9.50.005682
ORF1ab/nsp13337R337RcgTcgC11B.4.70.010101
ORF1ab/nsp13337R337RcgTcgC11B.400.000364
ORF1ab/nsp13337R337RcgTcgC11B.470.020408
ORF1ab/nsp13337R337RcgTcgC11C.370.000116
ORF1ab/nsp13337R337RcgTcgC11P.20.000187
ORF1ab/nsp13337R337RcgTcgA11Q.80.000165