CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = R303T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13303R303TR5627TnonsynCGCACT74320.43243217143-17145
ORF1ab/nsp13303R303TR5627TnonsynCGCACA74200.2702717143-17145
ORF1ab/nsp13303R303TR5627TnonsynCGcACc74190.25675717143-17145
ORF1ab/nsp13303R303TR5627TnonsynCGCACG7430.040540517143-17145

Details of the mutation R303T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13303R303TCGCACT3274All0.000006
ORF1ab/nsp13303R303TCGCACA2074All0.000004
ORF1ab/nsp13303R303TCGcACc1974All0.000004
ORF1ab/nsp13303R303TCGCACG374All0.000001
ORF1ab/nsp13303R303TCGCACT3172B.1.1.70.000028
ORF1ab/nsp13303R303TCGCACA2072B.1.1.70.000018
ORF1ab/nsp13303R303TCGcACc1872B.1.1.70.000016
ORF1ab/nsp13303R303TCGCACG372B.1.1.70.000003
ORF1ab/nsp13303R303TCGcACc12P.10.000016
ORF1ab/nsp13303R303TCGCACT12P.10.000016