CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = R303S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13303R303SR5627SnonsynCGCTCT57150.26315817143-17145
ORF1ab/nsp13303R303SR5627SnonsynCgcAgc57140.24561417143-17145
ORF1ab/nsp13303R303SR5627SnonsynCGcTCc57120.21052617143-17145
ORF1ab/nsp13303R303SR5627SnonsynCGCTCA57100.17543917143-17145
ORF1ab/nsp13303R303SR5627SnonsynCgCAgT5740.070175417143-17145
ORF1ab/nsp13303R303SR5627SnonsynCGCTCG5720.035087717143-17145

Details of the mutation R303S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13303R303SCGCTCT1557All0.000003
ORF1ab/nsp13303R303SCgcAgc1457All0.000003
ORF1ab/nsp13303R303SCGcTCc1257All0.000002
ORF1ab/nsp13303R303SCGCTCA1057All0.000002
ORF1ab/nsp13303R303SCgCAgT457All0.000001
ORF1ab/nsp13303R303SCGCTCG257All0
ORF1ab/nsp13303R303SCGCTCT1548B.1.1.70.000013
ORF1ab/nsp13303R303SCGcTCc1248B.1.1.70.000011
ORF1ab/nsp13303R303SCGCTCA1048B.1.1.70.000009
ORF1ab/nsp13303R303SCgcAgc548B.1.1.70.000004
ORF1ab/nsp13303R303SCgCAgT448B.1.1.70.000004
ORF1ab/nsp13303R303SCGCTCG248B.1.1.70.000002
ORF1ab/nsp13303R303SCgcAgc22B.10.000018
ORF1ab/nsp13303R303SCgcAgc22B.1.5250.000226
ORF1ab/nsp13303R303SCgcAgc11AY.380.000499
ORF1ab/nsp13303R303SCgcAgc11AY.40.000002
ORF1ab/nsp13303R303SCgcAgc11B.1.1770.000013
ORF1ab/nsp13303R303SCgcAgc11B.1.5960.000087
ORF1ab/nsp13303R303SCgcAgc11B.1.617.20.000004