CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = R212R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13212R212RR5536RsyncgAcgG11076890.62240316870-16872
ORF1ab/nsp13212R212RR5536RsynCgaAga11073290.297216870-16872
ORF1ab/nsp13212R212RR5536RsyncgAcgC1107630.056910616870-16872
ORF1ab/nsp13212R212RR5536RsyncgAcgT1107250.022583616870-16872
ORF1ab/nsp13212R212RR5536RsynCgAAgG110710.00090334216870-16872

Details of the mutation R212R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13212R212RcgAcgG6891107All0.000132
ORF1ab/nsp13212R212RCgaAga3291107All0.000063
ORF1ab/nsp13212R212RcgAcgC631107All0.000012
ORF1ab/nsp13212R212RcgAcgT251107All0.000005
ORF1ab/nsp13212R212RCgAAgG11107All0
ORF1ab/nsp13212R212RcgAcgG446446AY.150.991111
ORF1ab/nsp13212R212RcgAcgG7676AY.130.012234
ORF1ab/nsp13212R212RcgAcgG4272B.1.617.20.000158
ORF1ab/nsp13212R212RCgaAga2472B.1.617.20.00009
ORF1ab/nsp13212R212RcgAcgC572B.1.617.20.000019
ORF1ab/nsp13212R212RcgAcgT172B.1.617.20.000004
ORF1ab/nsp13212R212RcgAcgG2540B.1.1.70.000022
ORF1ab/nsp13212R212RcgAcgC940B.1.1.70.000008
ORF1ab/nsp13212R212RCgaAga640B.1.1.70.000005
ORF1ab/nsp13212R212RcgAcgG1735AY.430.000075
ORF1ab/nsp13212R212RCgaAga1235AY.430.000053
ORF1ab/nsp13212R212RcgAcgC535AY.430.000022
ORF1ab/nsp13212R212RCgAAgG135AY.430.000004
ORF1ab/nsp13212R212RCgaAga2132AY.40.000033
ORF1ab/nsp13212R212RcgAcgT632AY.40.000009
ORF1ab/nsp13212R212RcgAcgG332AY.40.000005
ORF1ab/nsp13212R212RcgAcgC232AY.40.000003
ORF1ab/nsp13212R212RCgaAga2332AY.440.00014
ORF1ab/nsp13212R212RcgAcgC732AY.440.000043
ORF1ab/nsp13212R212RcgAcgG232AY.440.000012
ORF1ab/nsp13212R212RCgaAga2727B.1.4290.000635
ORF1ab/nsp13212R212RCgaAga1722P.10.000268
ORF1ab/nsp13212R212RcgAcgG522P.10.000079
ORF1ab/nsp13212R212RCgaAga2121B.1.36.380.034483
ORF1ab/nsp13212R212RCgaAga2121P.1.100.005659
ORF1ab/nsp13212R212RcgAcgG1820B.1.5260.000423
ORF1ab/nsp13212R212RCgaAga220B.1.5260.000047
ORF1ab/nsp13212R212RCgaAga1718AY.1000.000782
ORF1ab/nsp13212R212RcgAcgC118AY.1000.000046
ORF1ab/nsp13212R212RCgaAga1618B.10.000147
ORF1ab/nsp13212R212RcgAcgG118B.10.000009
ORF1ab/nsp13212R212RcgAcgC118B.10.000009
ORF1ab/nsp13212R212RCgaAga1617AY.1030.000099
ORF1ab/nsp13212R212RcgAcgC117AY.1030.000006
ORF1ab/nsp13212R212RCgaAga1717B.1.2400.003665
ORF1ab/nsp13212R212RCgaAga1616AY.470.000498
ORF1ab/nsp13212R212RcgAcgG1515AY.1050.009646
ORF1ab/nsp13212R212RcgAcgT1013AY.250.00006
ORF1ab/nsp13212R212RCgaAga213AY.250.000012
ORF1ab/nsp13212R212RcgAcgC113AY.250.000006
ORF1ab/nsp13212R212RCgaAga512B.1.20.000044
ORF1ab/nsp13212R212RcgAcgG312B.1.20.000026
ORF1ab/nsp13212R212RcgAcgC212B.1.20.000018
ORF1ab/nsp13212R212RcgAcgT212B.1.20.000018
ORF1ab/nsp13212R212RcgAcgC1010B.1.2650.012706
ORF1ab/nsp13212R212RCgaAga78B.1.1770.000092
ORF1ab/nsp13212R212RcgAcgG18B.1.1770.000013
ORF1ab/nsp13212R212RCgaAga88B.1.6370.000585
ORF1ab/nsp13212R212RCgaAga66AY.290.000095
ORF1ab/nsp13212R212RcgAcgG66B.1.360.000875
ORF1ab/nsp13212R212RCgaAga45AY.30.00004
ORF1ab/nsp13212R212RcgAcgT15AY.30.00001
ORF1ab/nsp13212R212RCgaAga44AE.10.045455
ORF1ab/nsp13212R212RCgaAga44AY.10.001583
ORF1ab/nsp13212R212RCgaAga44AY.4.20.000087
ORF1ab/nsp13212R212RcgAcgC33AY.1020.00008
ORF1ab/nsp13212R212RCgaAga33AY.500.002398
ORF1ab/nsp13212R212RcgAcgG23AY.540.000191
ORF1ab/nsp13212R212RCgaAga13AY.540.000095
ORF1ab/nsp13212R212RcgAcgG33AY.770.003382
ORF1ab/nsp13212R212RCgaAga23B.1.10.000036
ORF1ab/nsp13212R212RcgAcgG13B.1.10.000018
ORF1ab/nsp13212R212RcgAcgC33B.1.1.260.015707
ORF1ab/nsp13212R212RcgAcgG33B.1.1.3550.046154
ORF1ab/nsp13212R212RCgaAga23B.1.2430.000139
ORF1ab/nsp13212R212RcgAcgG13B.1.2430.00007
ORF1ab/nsp13212R212RCgaAga33P.1.140.000143
ORF1ab/nsp13212R212RcgAcgG22AY.380.000999
ORF1ab/nsp13212R212RcgAcgG22AY.460.000208
ORF1ab/nsp13212R212RcgAcgC22AY.50.000041
ORF1ab/nsp13212R212RcgAcgG22AY.590.001059
ORF1ab/nsp13212R212RCgaAga12AY.60.000041
ORF1ab/nsp13212R212RcgAcgT12AY.60.000041
ORF1ab/nsp13212R212RcgAcgC12AY.750.000056
ORF1ab/nsp13212R212RCgaAga12AY.750.000056
ORF1ab/nsp13212R212RcgAcgC22B.1.2580.000133
ORF1ab/nsp13212R212RcgAcgC22B.1.3510.000059
ORF1ab/nsp13212R212RCgaAga12B.1.5960.000087
ORF1ab/nsp13212R212RcgAcgG12B.1.5960.000087
ORF1ab/nsp13212R212RcgAcgG22C.370.000232
ORF1ab/nsp13212R212RcgAcgG110.055556
ORF1ab/nsp13212R212RcgAcgC11AJ.10.045455
ORF1ab/nsp13212R212RcgAcgC11AY.1080.001103
ORF1ab/nsp13212R212RcgAcgG11AY.116.10.000311
ORF1ab/nsp13212R212RcgAcgG11AY.1180.000063
ORF1ab/nsp13212R212RcgAcgG11AY.190.00114
ORF1ab/nsp13212R212RCgaAga11AY.200.000039
ORF1ab/nsp13212R212RcgAcgG11AY.230.00007
ORF1ab/nsp13212R212RcgAcgT11AY.260.000028
ORF1ab/nsp13212R212RCgaAga11AY.330.000067
ORF1ab/nsp13212R212RCgaAga11AY.39.10.00004
ORF1ab/nsp13212R212RcgAcgT11AY.39.20.001541
ORF1ab/nsp13212R212RcgAcgC11AY.450.000122
ORF1ab/nsp13212R212RcgAcgG11AY.550.000917
ORF1ab/nsp13212R212RcgAcgG11AY.75.10.00018
ORF1ab/nsp13212R212RcgAcgG11AY.980.000079
ORF1ab/nsp13212R212RCgaAga11AY.99.20.000092
ORF1ab/nsp13212R212RCgaAga11B0.000128
ORF1ab/nsp13212R212RCgaAga11B.1.1.1760.000439
ORF1ab/nsp13212R212RCgaAga11B.1.1.2860.002899
ORF1ab/nsp13212R212RCgaAga11B.1.1.3170.000412
ORF1ab/nsp13212R212RcgAcgC11B.1.1.4340.000349
ORF1ab/nsp13212R212RcgAcgG11B.1.1.5190.00004
ORF1ab/nsp13212R212RcgAcgG11B.1.1600.000031
ORF1ab/nsp13212R212RCgaAga11B.1.177.730.000566
ORF1ab/nsp13212R212RcgAcgC11B.1.3290.000608
ORF1ab/nsp13212R212RCgaAga11B.1.4270.00005
ORF1ab/nsp13212R212RCgaAga11B.1.4700.001404
ORF1ab/nsp13212R212RcgAcgC11B.1.5240.001406
ORF1ab/nsp13212R212RcgAcgT11B.1.5510.00129
ORF1ab/nsp13212R212RCgaAga11C.270.018519
ORF1ab/nsp13212R212RcgAcgT11P.1.20.001156
ORF1ab/nsp13212R212RCgaAga11P.1.70.000319
ORF1ab/nsp13212R212RCgaAga11P.20.000187
ORF1ab/nsp13212R212RCgaAga11R.10.00009