CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = Q88del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1388Q88del1Q5412del1delCAA-NN760.85714316498-16500
ORF1ab/nsp1388Q88del1Q5412del1delcAAc-T710.14285716498-16500

Details of the mutation Q88del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1388Q88del1CAA-NN67All0.000001
ORF1ab/nsp1388Q88del1cAAc-T17All0
ORF1ab/nsp1388Q88del1CAA-NN55B.1.1.70.000004
ORF1ab/nsp1388Q88del1cAAc-T11AY.250.000006
ORF1ab/nsp1388Q88del1CAA-NN11AY.90.000068