CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = Q88H

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1388Q88HQ5412HnonsyncaAcaC42717426520.99847816498-16500
ORF1ab/nsp1388Q88HQ5412HnonsyncaAcaT42717650.0015216416498-16500

Details of the mutation Q88H within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1388Q88HcaAcaC4265242717All0.008158
ORF1ab/nsp1388Q88HcaAcaT6542717All0.000012
ORF1ab/nsp1388Q88HcaAcaC4184641897B.1.5260.98357
ORF1ab/nsp1388Q88HcaAcaT5141897B.1.5260.001199
ORF1ab/nsp1388Q88HcaAcaC308311B.1.1.70.000276
ORF1ab/nsp1388Q88HcaAcaT3311B.1.1.70.000003
ORF1ab/nsp1388Q88HcaAcaC288290B.10.002638
ORF1ab/nsp1388Q88HcaAcaT2290B.10.000018
ORF1ab/nsp1388Q88HcaAcaC3940B.1.10.000707
ORF1ab/nsp1388Q88HcaAcaT140B.1.10.000018
ORF1ab/nsp1388Q88HcaAcaC2828B.1.6230.015021
ORF1ab/nsp1388Q88HcaAcaC2424AY.200.000933
ORF1ab/nsp1388Q88HcaAcaC2424B.1.177.730.01359
ORF1ab/nsp1388Q88HcaAcaC1919B.1.20.000167
ORF1ab/nsp1388Q88HcaAcaC99B.1.1.3120.017208
ORF1ab/nsp1388Q88HcaAcaC66B.1.6250.014118
ORF1ab/nsp1388Q88HcaAcaC55P.10.000079
ORF1ab/nsp1388Q88HcaAcaC44B.1.1.2200.007435
ORF1ab/nsp1388Q88HcaAcaC44B.1.5750.001214
ORF1ab/nsp1388Q88HcaAcaC33B.1.1.5070.026087
ORF1ab/nsp1388Q88HcaAcaC33B.1.5670.01
ORF1ab/nsp1388Q88HcaAcaC33B.1.5960.000261
ORF1ab/nsp1388Q88HcaAcaT22AY.250.000012
ORF1ab/nsp1388Q88HcaAcaC22AY.40.000003
ORF1ab/nsp1388Q88HcaAcaC22B0.000256
ORF1ab/nsp1388Q88HcaAcaT22B.1.1.2220.000408
ORF1ab/nsp1388Q88HcaAcaC22B.1.177.70.00033
ORF1ab/nsp1388Q88HcaAcaC22B.1.2430.000139
ORF1ab/nsp1388Q88HcaAcaC22B.1.4270.000101
ORF1ab/nsp1388Q88HcaAcaC22B.1.4290.000047
ORF1ab/nsp1388Q88HcaAcaC22B.1.5610.000794
ORF1ab/nsp1388Q88HcaAcaC22B.1.5800.00813
ORF1ab/nsp1388Q88HcaAcaC12B.1.617.20.000004
ORF1ab/nsp1388Q88HcaAcaT12B.1.617.20.000004
ORF1ab/nsp1388Q88HcaAcaC22P.1.120.000968
ORF1ab/nsp1388Q88HcaAcaC11AT.10.005128
ORF1ab/nsp1388Q88HcaAcaC11AY.1020.000027
ORF1ab/nsp1388Q88HcaAcaC11AY.430.000004
ORF1ab/nsp1388Q88HcaAcaT11AY.440.000006
ORF1ab/nsp1388Q88HcaAcaC11B.1.1.3720.000689
ORF1ab/nsp1388Q88HcaAcaC11B.1.1.5190.00004
ORF1ab/nsp1388Q88HcaAcaC11B.1.1600.000031
ORF1ab/nsp1388Q88HcaAcaC11B.1.1700.00431
ORF1ab/nsp1388Q88HcaAcaT11B.1.177.440.000519
ORF1ab/nsp1388Q88HcaAcaC11B.1.2140.003663
ORF1ab/nsp1388Q88HcaAcaC11B.1.243.10.022222
ORF1ab/nsp1388Q88HcaAcaC11B.1.2760.016949
ORF1ab/nsp1388Q88HcaAcaC11B.1.3510.00003
ORF1ab/nsp1388Q88HcaAcaC11B.1.5300.007143
ORF1ab/nsp1388Q88HcaAcaC11B.1.5440.006024
ORF1ab/nsp1388Q88HcaAcaC11B.1.5850.027778
ORF1ab/nsp1388Q88HcaAcaT11B.1.617.10.000129
ORF1ab/nsp1388Q88HcaAcaC11B.1.6370.000073
ORF1ab/nsp1388Q88HcaAcaC11C.1.20.004255
ORF1ab/nsp1388Q88HcaAcaC11C.36.3.10.002717
ORF1ab/nsp1388Q88HcaAcaC11C.370.000116
ORF1ab/nsp1388Q88HcaAcaC11P.1.10.000318
ORF1ab/nsp1388Q88HcaAcaC11P.1.170.000162