CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = P77S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1377P77SP5401SnonsynCcaTca30290.96666716465-16467
ORF1ab/nsp1377P77SP5401SnonsynCCAAGT3010.033333316465-16467

Details of the mutation P77S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1377P77SCcaTca2930All0.000006
ORF1ab/nsp1377P77SCCAAGT130All0
ORF1ab/nsp1377P77SCcaTca66B.1.1770.000079
ORF1ab/nsp1377P77SCcaTca33B.10.000027
ORF1ab/nsp1377P77SCcaTca33B.1.1.70.000003
ORF1ab/nsp1377P77SCcaTca33B.1.6210.000266
ORF1ab/nsp1377P77SCcaTca12B.1.10.000018
ORF1ab/nsp1377P77SCCAAGT12B.1.10.000018
ORF1ab/nsp1377P77SCcaTca22B.1.20.000018
ORF1ab/nsp1377P77SCcaTca22B.1.3990.003868
ORF1ab/nsp1377P77SCcaTca11A.20.000662
ORF1ab/nsp1377P77SCcaTca11A.50.001923
ORF1ab/nsp1377P77SCcaTca11B.1.1.10.000327
ORF1ab/nsp1377P77SCcaTca11B.1.1.2140.000055
ORF1ab/nsp1377P77SCcaTca11B.1.1.2440.015385
ORF1ab/nsp1377P77SCcaTca11B.1.258.170.000104
ORF1ab/nsp1377P77SCcaTca11B.1.3240.001605
ORF1ab/nsp1377P77SCcaTca11B.1.4990.00105
ORF1ab/nsp1377P77SCcaTca11B.1.5960.000087