CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = P53del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1353P53delP5377deldelCCA---6060116393-16395

Details of the mutation P53del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1353P53delCCA---6060All0.000011
ORF1ab/nsp1353P53delCCA---3232B.1.1.70.000029
ORF1ab/nsp1353P53delCCA---33AY.430.000013
ORF1ab/nsp1353P53delCCA---33B.1.617.20.000011
ORF1ab/nsp1353P53delCCA---220.111111
ORF1ab/nsp1353P53delCCA---22AY.4.50.000215
ORF1ab/nsp1353P53delCCA---22B.1.10.000036
ORF1ab/nsp1353P53delCCA---11AY.1110.000183
ORF1ab/nsp1353P53delCCA---11AY.1130.000142
ORF1ab/nsp1353P53delCCA---11AY.30.00001
ORF1ab/nsp1353P53delCCA---11AY.330.000067
ORF1ab/nsp1353P53delCCA---11AY.40.000002
ORF1ab/nsp1353P53delCCA---11AY.990.001049
ORF1ab/nsp1353P53delCCA---11B.1.1.700.000341
ORF1ab/nsp1353P53delCCA---11B.1.1600.000031
ORF1ab/nsp1353P53delCCA---11B.1.1770.000013
ORF1ab/nsp1353P53delCCA---11B.1.177.40.000211
ORF1ab/nsp1353P53delCCA---11B.1.177.620.001192
ORF1ab/nsp1353P53delCCA---11B.1.177.680.015152
ORF1ab/nsp1353P53delCCA---11B.1.177.70.000165
ORF1ab/nsp1353P53delCCA---11B.1.177.730.000566
ORF1ab/nsp1353P53delCCA---11B.1.177.830.001481
ORF1ab/nsp1353P53delCCA---11B.1.416.10.001563