CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = P529L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13529P529LP5853LnonsyncCacTa62076207117821-17823

Details of the mutation P529L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13529P529LcCacTa62076207All0.001187
ORF1ab/nsp13529P529LcCacTa16571657AY.1200.061605
ORF1ab/nsp13529P529LcCacTa801801B.1.20.007053
ORF1ab/nsp13529P529LcCacTa625625AY.40.000973
ORF1ab/nsp13529P529LcCacTa333333C.36.30.188883
ORF1ab/nsp13529P529LcCacTa323323C.36.3.10.877717
ORF1ab/nsp13529P529LcCacTa263263AY.30.002616
ORF1ab/nsp13529P529LcCacTa259259B.1.1.70.000232
ORF1ab/nsp13529P529LcCacTa165165B.1.617.20.000621
ORF1ab/nsp13529P529LcCacTa162162AY.46.40.026649
ORF1ab/nsp13529P529LcCacTa152152AY.460.01582
ORF1ab/nsp13529P529LcCacTa148148AY.250.00089
ORF1ab/nsp13529P529LcCacTa9090AY.430.000399
ORF1ab/nsp13529P529LcCacTa7070B.10.000641
ORF1ab/nsp13529P529LcCacTa6262A.2.5.10.298077
ORF1ab/nsp13529P529LcCacTa5858AY.440.000353
ORF1ab/nsp13529P529LcCacTa5252AY.290.00082
ORF1ab/nsp13529P529LcCacTa4949AY.1110.008974
ORF1ab/nsp13529P529LcCacTa4949AY.390.001211
ORF1ab/nsp13529P529LcCacTa3333B.1.4290.000776
ORF1ab/nsp13529P529LcCacTa2929AY.1030.00018
ORF1ab/nsp13529P529LcCacTa2727B.1.10.00049
ORF1ab/nsp13529P529LcCacTa2626AY.99.20.002396
ORF1ab/nsp13529P529LcCacTa2525AY.4.20.000542
ORF1ab/nsp13529P529LcCacTa2424B.1.1.1760.010545
ORF1ab/nsp13529P529LcCacTa2424B.1.5170.010248
ORF1ab/nsp13529P529LcCacTa2424B.1.6210.002124
ORF1ab/nsp13529P529LcCacTa2323AY.1020.00061
ORF1ab/nsp13529P529LcCacTa2020AY.990.020986
ORF1ab/nsp13529P529LcCacTa1818B.1.1.5190.000715
ORF1ab/nsp13529P529LcCacTa1818P.10.000284
ORF1ab/nsp13529P529LcCacTa1717AY.420.000684
ORF1ab/nsp13529P529LcCacTa1616AY.1190.000565
ORF1ab/nsp13529P529LcCacTa1515B.1.5960.001307
ORF1ab/nsp13529P529LcCacTa1414AY.470.000435
ORF1ab/nsp13529P529LcCacTa1414B.1.5260.000329
ORF1ab/nsp13529P529LcCacTa1414R.10.00126
ORF1ab/nsp13529P529LcCacTa1313AY.850.005553
ORF1ab/nsp13529P529LcCacTa1313B.1.3690.003708
ORF1ab/nsp13529P529LcCacTa1212AY.200.000466
ORF1ab/nsp13529P529LcCacTa1212AY.980.000948
ORF1ab/nsp13529P529LcCacTa1111B.1.1.3050.042471
ORF1ab/nsp13529P529LcCacTa1111B.1.1770.000145
ORF1ab/nsp13529P529LcCacTa1111B.1.466.20.004304
ORF1ab/nsp13529P529LcCacTa1010AY.260.000283
ORF1ab/nsp13529P529LcCacTa1010AY.630.003868
ORF1ab/nsp13529P529LcCacTa1010B.1.438.10.001073
ORF1ab/nsp13529P529LcCacTa99AY.450.001095
ORF1ab/nsp13529P529LcCacTa99AY.710.004276
ORF1ab/nsp13529P529LcCacTa99AY.750.000504
ORF1ab/nsp13529P529LcCacTa99B.1.4060.054545
ORF1ab/nsp13529P529LcCacTa99D.20.000675
ORF1ab/nsp13529P529LcCacTa88A.270.013245
ORF1ab/nsp13529P529LcCacTa88AY.1000.000368
ORF1ab/nsp13529P529LcCacTa88B.1.4270.000404
ORF1ab/nsp13529P529LcCacTa77AY.4.50.000752
ORF1ab/nsp13529P529LcCacTa77AY.50.000145
ORF1ab/nsp13529P529LcCacTa77AY.9.20.000257
ORF1ab/nsp13529P529LcCacTa77AZ.20.005747
ORF1ab/nsp13529P529LcCacTa77B.1.2430.000487
ORF1ab/nsp13529P529LcCacTa77B.1.3010.04142
ORF1ab/nsp13529P529LcCacTa66AY.1070.002796
ORF1ab/nsp13529P529LcCacTa66B.1.1.2940.007595
ORF1ab/nsp13529P529LcCacTa66B.1.1.3970.013514
ORF1ab/nsp13529P529LcCacTa55AY.1180.000313
ORF1ab/nsp13529P529LcCacTa55AY.4.2.10.000745
ORF1ab/nsp13529P529LcCacTa55AY.930.001365
ORF1ab/nsp13529P529LcCacTa55B.1.1.5230.007812
ORF1ab/nsp13529P529LcCacTa55B.1.3130.032895
ORF1ab/nsp13529P529LcCacTa55B.1.3510.000149
ORF1ab/nsp13529P529LcCacTa55B.1.5950.001305
ORF1ab/nsp13529P529LcCacTa55B.1.6280.001762
ORF1ab/nsp13529P529LcCacTa44AY.1160.001147
ORF1ab/nsp13529P529LcCacTa44AY.1210.000541
ORF1ab/nsp13529P529LcCacTa44AY.3.10.000341
ORF1ab/nsp13529P529LcCacTa44AY.300.001583
ORF1ab/nsp13529P529LcCacTa44AY.330.000267
ORF1ab/nsp13529P529LcCacTa44AY.340.000388
ORF1ab/nsp13529P529LcCacTa44B.1.2210.000284
ORF1ab/nsp13529P529LcCacTa44B.1.5250.000453
ORF1ab/nsp13529P529LcCacTa44N.50.007067
ORF1ab/nsp13529P529LcCacTa44P.1.140.000191
ORF1ab/nsp13529P529LcCacTa33A.2.50.001497
ORF1ab/nsp13529P529LcCacTa33AY.5.30.001012
ORF1ab/nsp13529P529LcCacTa33B.1.1.2360.02069
ORF1ab/nsp13529P529LcCacTa33B.1.1.2770.002276
ORF1ab/nsp13529P529LcCacTa33B.1.1110.003525
ORF1ab/nsp13529P529LcCacTa33B.1.1600.000094
ORF1ab/nsp13529P529LcCacTa33B.1.36.290.001552
ORF1ab/nsp13529P529LcCacTa33B.1.6340.010274
ORF1ab/nsp13529P529LcCacTa33Q.10.000379
ORF1ab/nsp13529P529LcCacTa22A.2.5.30.020619
ORF1ab/nsp13529P529LcCacTa22AY.10.000791
ORF1ab/nsp13529P529LcCacTa22AY.1100.000225
ORF1ab/nsp13529P529LcCacTa22AY.1130.000285
ORF1ab/nsp13529P529LcCacTa22AY.1140.000462
ORF1ab/nsp13529P529LcCacTa22AY.1170.000169
ORF1ab/nsp13529P529LcCacTa22AY.130.000322
ORF1ab/nsp13529P529LcCacTa22AY.160.000759
ORF1ab/nsp13529P529LcCacTa22AY.16.10.00094
ORF1ab/nsp13529P529LcCacTa22AY.230.000139
ORF1ab/nsp13529P529LcCacTa22AY.46.50.000397
ORF1ab/nsp13529P529LcCacTa22AY.650.001066
ORF1ab/nsp13529P529LcCacTa22AY.690.000373
ORF1ab/nsp13529P529LcCacTa22AY.840.000875
ORF1ab/nsp13529P529LcCacTa22AY.910.001461
ORF1ab/nsp13529P529LcCacTa22AY.920.000575
ORF1ab/nsp13529P529LcCacTa22AY.98.10.000097
ORF1ab/nsp13529P529LcCacTa22B0.000256
ORF1ab/nsp13529P529LcCacTa22B.1.1.10.000653
ORF1ab/nsp13529P529LcCacTa22B.1.1.3180.000604
ORF1ab/nsp13529P529LcCacTa22B.1.1.3370.007194
ORF1ab/nsp13529P529LcCacTa22B.1.1.4180.045455
ORF1ab/nsp13529P529LcCacTa22B.1.1.5060.074074
ORF1ab/nsp13529P529LcCacTa22B.1.177.560.001335
ORF1ab/nsp13529P529LcCacTa22B.1.177.70.00033
ORF1ab/nsp13529P529LcCacTa22B.1.177.810.000379
ORF1ab/nsp13529P529LcCacTa22B.1.177.820.000955
ORF1ab/nsp13529P529LcCacTa22B.1.177.860.000367
ORF1ab/nsp13529P529LcCacTa22B.1.2340.000264
ORF1ab/nsp13529P529LcCacTa22B.1.2580.000133
ORF1ab/nsp13529P529LcCacTa22B.1.258.170.000208
ORF1ab/nsp13529P529LcCacTa22B.1.2980.004228
ORF1ab/nsp13529P529LcCacTa22B.1.3200.002491
ORF1ab/nsp13529P529LcCacTa22B.1.351.20.000605
ORF1ab/nsp13529P529LcCacTa22B.1.4090.001563
ORF1ab/nsp13529P529LcCacTa22B.1.4220.001625
ORF1ab/nsp13529P529LcCacTa22B.1.4700.002809
ORF1ab/nsp13529P529LcCacTa22B.1.5750.000607
ORF1ab/nsp13529P529LcCacTa22B.1.617.10.000258
ORF1ab/nsp13529P529LcCacTa22B.1.6360.013423
ORF1ab/nsp13529P529LcCacTa22B.1.6370.000146
ORF1ab/nsp13529P529LcCacTa22C.390.037736
ORF1ab/nsp13529P529LcCacTa22P.1.20.002312
ORF1ab/nsp13529P529LcCacTa22Q.80.00033
ORF1ab/nsp13529P529LcCacTa110.055556
ORF1ab/nsp13529P529LcCacTa11AD.20.000219
ORF1ab/nsp13529P529LcCacTa11AY.1010.00049
ORF1ab/nsp13529P529LcCacTa11AY.1090.00074
ORF1ab/nsp13529P529LcCacTa11AY.120.000316
ORF1ab/nsp13529P529LcCacTa11AY.120.2.10.000498
ORF1ab/nsp13529P529LcCacTa11AY.280.00189
ORF1ab/nsp13529P529LcCacTa11AY.29.10.000221
ORF1ab/nsp13529P529LcCacTa11AY.320.000532
ORF1ab/nsp13529P529LcCacTa11AY.350.000233
ORF1ab/nsp13529P529LcCacTa11AY.39.10.00004
ORF1ab/nsp13529P529LcCacTa11AY.46.20.000635
ORF1ab/nsp13529P529LcCacTa11AY.480.000465
ORF1ab/nsp13529P529LcCacTa11AY.490.003195
ORF1ab/nsp13529P529LcCacTa11AY.540.000095
ORF1ab/nsp13529P529LcCacTa11AY.550.000917
ORF1ab/nsp13529P529LcCacTa11AY.590.00053
ORF1ab/nsp13529P529LcCacTa11AY.610.000105
ORF1ab/nsp13529P529LcCacTa11AY.660.00107
ORF1ab/nsp13529P529LcCacTa11AY.70.000196
ORF1ab/nsp13529P529LcCacTa11AY.7.10.000113
ORF1ab/nsp13529P529LcCacTa11AY.700.000209
ORF1ab/nsp13529P529LcCacTa11AY.730.000665
ORF1ab/nsp13529P529LcCacTa11AY.740.000116
ORF1ab/nsp13529P529LcCacTa11AY.90.000068
ORF1ab/nsp13529P529LcCacTa11AY.900.000684
ORF1ab/nsp13529P529LcCacTa11AY.950.000761
ORF1ab/nsp13529P529LcCacTa11B.1.1.1530.001095
ORF1ab/nsp13529P529LcCacTa11B.1.1.2070.001182
ORF1ab/nsp13529P529LcCacTa11B.1.1.2140.000055
ORF1ab/nsp13529P529LcCacTa11B.1.1.2200.001859
ORF1ab/nsp13529P529LcCacTa11B.1.1.2260.005814
ORF1ab/nsp13529P529LcCacTa11B.1.1.2310.003096
ORF1ab/nsp13529P529LcCacTa11B.1.1.2430.004082
ORF1ab/nsp13529P529LcCacTa11B.1.1.2630.001558
ORF1ab/nsp13529P529LcCacTa11B.1.1.3660.015873
ORF1ab/nsp13529P529LcCacTa11B.1.1.3720.000689
ORF1ab/nsp13529P529LcCacTa11B.1.1.4020.011111
ORF1ab/nsp13529P529LcCacTa11B.1.1.4640.001473
ORF1ab/nsp13529P529LcCacTa11B.1.1.5250.005464
ORF1ab/nsp13529P529LcCacTa11B.1.160.120.00641
ORF1ab/nsp13529P529LcCacTa11B.1.177.440.000519
ORF1ab/nsp13529P529LcCacTa11B.1.2140.003663
ORF1ab/nsp13529P529LcCacTa11B.1.2390.001221
ORF1ab/nsp13529P529LcCacTa11B.1.2400.000216
ORF1ab/nsp13529P529LcCacTa11B.1.2650.001271
ORF1ab/nsp13529P529LcCacTa11B.1.3110.000275
ORF1ab/nsp13529P529LcCacTa11B.1.351.50.0006
ORF1ab/nsp13529P529LcCacTa11B.1.36.170.000494
ORF1ab/nsp13529P529LcCacTa11B.1.3610.001289
ORF1ab/nsp13529P529LcCacTa11B.1.362.20.004717
ORF1ab/nsp13529P529LcCacTa11B.1.3810.007812
ORF1ab/nsp13529P529LcCacTa11B.1.3960.000706
ORF1ab/nsp13529P529LcCacTa11B.1.3990.001934
ORF1ab/nsp13529P529LcCacTa11B.1.4080.00369
ORF1ab/nsp13529P529LcCacTa11B.1.4160.001269
ORF1ab/nsp13529P529LcCacTa11B.1.4680.005714
ORF1ab/nsp13529P529LcCacTa11B.1.4970.000315
ORF1ab/nsp13529P529LcCacTa11B.1.5400.009709
ORF1ab/nsp13529P529LcCacTa11B.1.5490.007194
ORF1ab/nsp13529P529LcCacTa11B.1.575.10.002439
ORF1ab/nsp13529P529LcCacTa11B.1.6000.005848
ORF1ab/nsp13529P529LcCacTa11B.1.6090.000479
ORF1ab/nsp13529P529LcCacTa11B.1.9.40.006135
ORF1ab/nsp13529P529LcCacTa11B.30.000831
ORF1ab/nsp13529P529LcCacTa11B.6.60.000889
ORF1ab/nsp13529P529LcCacTa11C.160.00106
ORF1ab/nsp13529P529LcCacTa11C.30.10.006711
ORF1ab/nsp13529P529LcCacTa11C.360.000911
ORF1ab/nsp13529P529LcCacTa11P.1.170.000162
ORF1ab/nsp13529P529LcCacTa11P.20.000187