CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = P335P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13335P335PP5659PsynccTccC6193740.604217239-17241
ORF1ab/nsp13335P335PP5659PsynccTccA6192320.37479817239-17241
ORF1ab/nsp13335P335PP5659PsynccTccG619130.021001617239-17241

Details of the mutation P335P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13335P335PccTccC374619All0.000072
ORF1ab/nsp13335P335PccTccA232619All0.000044
ORF1ab/nsp13335P335PccTccG13619All0.000002
ORF1ab/nsp13335P335PccTccC163163B.1.5730.993902
ORF1ab/nsp13335P335PccTccC7575B.1.1.3510.209497
ORF1ab/nsp13335P335PccTccC3568B.1.1.70.000031
ORF1ab/nsp13335P335PccTccA3268B.1.1.70.000029
ORF1ab/nsp13335P335PccTccG168B.1.1.70.000001
ORF1ab/nsp13335P335PccTccA4040B.1.258.70.076482
ORF1ab/nsp13335P335PccTccA2836AY.440.00017
ORF1ab/nsp13335P335PccTccC836AY.440.000049
ORF1ab/nsp13335P335PccTccA1924B.1.20.000167
ORF1ab/nsp13335P335PccTccC524B.1.20.000044
ORF1ab/nsp13335P335PccTccC1323AY.430.000058
ORF1ab/nsp13335P335PccTccA1023AY.430.000044
ORF1ab/nsp13335P335PccTccC1015AY.40.000016
ORF1ab/nsp13335P335PccTccA515AY.40.000008
ORF1ab/nsp13335P335PccTccA911AY.290.000142
ORF1ab/nsp13335P335PccTccC211AY.290.000032
ORF1ab/nsp13335P335PccTccC1010AY.34.10.005099
ORF1ab/nsp13335P335PccTccC1010AY.46.60.000722
ORF1ab/nsp13335P335PccTccA79B.1.617.20.000026
ORF1ab/nsp13335P335PccTccC29B.1.617.20.000008
ORF1ab/nsp13335P335PccTccA78AY.250.000042
ORF1ab/nsp13335P335PccTccC18AY.250.000006
ORF1ab/nsp13335P335PccTccA88P.10.000126
ORF1ab/nsp13335P335PccTccA77AY.390.000173
ORF1ab/nsp13335P335PccTccA77Q.40.003183
ORF1ab/nsp13335P335PccTccG66AY.120.10.001926
ORF1ab/nsp13335P335PccTccC35AY.1030.000019
ORF1ab/nsp13335P335PccTccA25AY.1030.000012
ORF1ab/nsp13335P335PccTccC55B.1.10.000091
ORF1ab/nsp13335P335PccTccC55B.1.1600.000156
ORF1ab/nsp13335P335PccTccA55B.1.5770.003436
ORF1ab/nsp13335P335PccTccA34AY.30.00003
ORF1ab/nsp13335P335PccTccC14AY.30.00001
ORF1ab/nsp13335P335PccTccC44B.10.000037
ORF1ab/nsp13335P335PccTccG44B.1.4360.004115
ORF1ab/nsp13335P335PccTccA33AY.39.10.000119
ORF1ab/nsp13335P335PccTccA23AY.4.20.000043
ORF1ab/nsp13335P335PccTccC13AY.4.20.000022
ORF1ab/nsp13335P335PccTccA33AY.730.001996
ORF1ab/nsp13335P335PccTccA33B.1.1.370.000579
ORF1ab/nsp13335P335PccTccC23B.1.5250.000226
ORF1ab/nsp13335P335PccTccA13B.1.5250.000113
ORF1ab/nsp13335P335PccTccA33B.1.5600.013889
ORF1ab/nsp13335P335PccTccA22AY.1020.000053
ORF1ab/nsp13335P335PccTccC22B.1.1.3180.000604
ORF1ab/nsp13335P335PccTccA12B.1.177.540.000606
ORF1ab/nsp13335P335PccTccG12B.1.177.540.000606
ORF1ab/nsp13335P335PccTccA22B.1.2580.000133
ORF1ab/nsp13335P335PccTccA22C.370.000232
ORF1ab/nsp13335P335PccTccA22P.1.120.000968
ORF1ab/nsp13335P335PccTccA11AE.80.000489
ORF1ab/nsp13335P335PccTccC11AY.1070.000466
ORF1ab/nsp13335P335PccTccA11AY.1130.000142
ORF1ab/nsp13335P335PccTccC11AY.1180.000063
ORF1ab/nsp13335P335PccTccC11AY.1190.000035
ORF1ab/nsp13335P335PccTccC11AY.200.000039
ORF1ab/nsp13335P335PccTccC11AY.260.000028
ORF1ab/nsp13335P335PccTccA11AY.300.000396
ORF1ab/nsp13335P335PccTccA11AY.330.000067
ORF1ab/nsp13335P335PccTccC11AY.340.000097
ORF1ab/nsp13335P335PccTccA11AY.450.000122
ORF1ab/nsp13335P335PccTccA11AY.50.000021
ORF1ab/nsp13335P335PccTccA11AY.60.000041
ORF1ab/nsp13335P335PccTccC11AY.770.001127
ORF1ab/nsp13335P335PccTccC11B.1.1.2970.002237
ORF1ab/nsp13335P335PccTccC11B.1.1.3170.000412
ORF1ab/nsp13335P335PccTccA11B.1.1.3320.03125
ORF1ab/nsp13335P335PccTccC11B.1.1.3350.012987
ORF1ab/nsp13335P335PccTccC11B.1.177.570.000281
ORF1ab/nsp13335P335PccTccA11B.1.258.30.001675
ORF1ab/nsp13335P335PccTccC11B.1.2790.000514
ORF1ab/nsp13335P335PccTccA11B.1.3510.00003
ORF1ab/nsp13335P335PccTccA11B.1.36.290.000517
ORF1ab/nsp13335P335PccTccC11B.1.3950.007042
ORF1ab/nsp13335P335PccTccA11B.1.4210.007463
ORF1ab/nsp13335P335PccTccC11B.1.5200.021739
ORF1ab/nsp13335P335PccTccC11B.1.5260.000024
ORF1ab/nsp13335P335PccTccA11B.1.617.10.000129
ORF1ab/nsp13335P335PccTccC11B.1.6210.000089
ORF1ab/nsp13335P335PccTccA11B.1.621.10.000506
ORF1ab/nsp13335P335PccTccA11B.1.6370.000073
ORF1ab/nsp13335P335PccTccA11B.400.000364
ORF1ab/nsp13335P335PccTccA11B.560.028571
ORF1ab/nsp13335P335PccTccC11P.1.170.000162
ORF1ab/nsp13335P335PccTccG11P.1.70.000319
ORF1ab/nsp13335P335PccTccA11P.30.001595
ORF1ab/nsp13335P335PccTccA11Q.80.000165