CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = P300S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13300P300SP5624SnonsynCctTct8718660.99425917134-17136
ORF1ab/nsp13300P300SP5624SnonsynCcTTcA87130.0034443217134-17136
ORF1ab/nsp13300P300SP5624SnonsynCcTTcG87120.0022962117134-17136

Details of the mutation P300S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13300P300SCctTct866871All0.000166
ORF1ab/nsp13300P300SCcTTcA3871All0.000001
ORF1ab/nsp13300P300SCcTTcG2871All0
ORF1ab/nsp13300P300SCctTct468473B.1.1.70.000419
ORF1ab/nsp13300P300SCcTTcA3473B.1.1.70.000003
ORF1ab/nsp13300P300SCcTTcG2473B.1.1.70.000002
ORF1ab/nsp13300P300SCctTct4848B.1.6040.827586
ORF1ab/nsp13300P300SCctTct4040AY.40.000062
ORF1ab/nsp13300P300SCctTct2727B.1.617.10.003482
ORF1ab/nsp13300P300SCctTct2626AY.250.000156
ORF1ab/nsp13300P300SCctTct2424B.1.1770.000316
ORF1ab/nsp13300P300SCctTct1515B.1.10.000272
ORF1ab/nsp13300P300SCctTct1313B.10.000119
ORF1ab/nsp13300P300SCctTct1111AY.1190.000388
ORF1ab/nsp13300P300SCctTct1010AY.430.000044
ORF1ab/nsp13300P300SCctTct99B.1.20.000079
ORF1ab/nsp13300P300SCctTct99B.1.2580.000599
ORF1ab/nsp13300P300SCctTct88P.10.000126
ORF1ab/nsp13300P300SCctTct77B.1.617.20.000026
ORF1ab/nsp13300P300SCctTct66B.1.177.120.00091
ORF1ab/nsp13300P300SCctTct66B.1.3510.000178
ORF1ab/nsp13300P300SCctTct66B.1.621.10.003035
ORF1ab/nsp13300P300SCctTct55AY.30.00005
ORF1ab/nsp13300P300SCctTct55AY.440.00003
ORF1ab/nsp13300P300SCctTct55B.1.5250.000566
ORF1ab/nsp13300P300SCctTct44AY.390.000099
ORF1ab/nsp13300P300SCctTct44B.1.1.280.001245
ORF1ab/nsp13300P300SCctTct44B.1.1600.000125
ORF1ab/nsp13300P300SCctTct44B.1.9.40.02454
ORF1ab/nsp13300P300SCctTct44C.370.000464
ORF1ab/nsp13300P300SCctTct33AY.380.001498
ORF1ab/nsp13300P300SCctTct33AY.4.20.000065
ORF1ab/nsp13300P300SCctTct33AY.60.000123
ORF1ab/nsp13300P300SCctTct33AY.600.002814
ORF1ab/nsp13300P300SCctTct33AY.980.000237
ORF1ab/nsp13300P300SCctTct33AY.98.10.000145
ORF1ab/nsp13300P300SCctTct33B.1.177.770.002179
ORF1ab/nsp13300P300SCctTct33B.1.36.290.001552
ORF1ab/nsp13300P300SCctTct33B.1.4290.000071
ORF1ab/nsp13300P300SCctTct33B.1.5260.000071
ORF1ab/nsp13300P300SCctTct33D.20.000225
ORF1ab/nsp13300P300SCctTct22A0.000774
ORF1ab/nsp13300P300SCctTct22AU.20.004843
ORF1ab/nsp13300P300SCctTct22AY.1110.000366
ORF1ab/nsp13300P300SCctTct22AY.29.10.000441
ORF1ab/nsp13300P300SCctTct22AY.340.000194
ORF1ab/nsp13300P300SCctTct22AY.470.000062
ORF1ab/nsp13300P300SCctTct22AY.50.000041
ORF1ab/nsp13300P300SCctTct22B.1.2430.000139
ORF1ab/nsp13300P300SCctTct22B.1.258.170.000208
ORF1ab/nsp13300P300SCctTct22B.1.258.210.015504
ORF1ab/nsp13300P300SCctTct22B.1.4270.000101
ORF1ab/nsp13300P300SCctTct11A.210.00277
ORF1ab/nsp13300P300SCctTct11AY.1030.000006
ORF1ab/nsp13300P300SCctTct11AY.1180.000063
ORF1ab/nsp13300P300SCctTct11AY.120.000316
ORF1ab/nsp13300P300SCctTct11AY.1210.000135
ORF1ab/nsp13300P300SCctTct11AY.20.000356
ORF1ab/nsp13300P300SCctTct11AY.290.000016
ORF1ab/nsp13300P300SCctTct11AY.350.000233
ORF1ab/nsp13300P300SCctTct11AY.46.60.000072
ORF1ab/nsp13300P300SCctTct11AY.700.000209
ORF1ab/nsp13300P300SCctTct11AY.710.000475
ORF1ab/nsp13300P300SCctTct11AY.750.000056
ORF1ab/nsp13300P300SCctTct11AY.760.004831
ORF1ab/nsp13300P300SCctTct11AY.840.000437
ORF1ab/nsp13300P300SCctTct11AY.90.000068
ORF1ab/nsp13300P300SCctTct11AY.9.20.000037
ORF1ab/nsp13300P300SCctTct11AY.99.20.000092
ORF1ab/nsp13300P300SCctTct11B.1.1.1570.000913
ORF1ab/nsp13300P300SCctTct11B.1.1.2220.000204
ORF1ab/nsp13300P300SCctTct11B.1.1.2770.000759
ORF1ab/nsp13300P300SCctTct11B.1.1.2840.000107
ORF1ab/nsp13300P300SCctTct11B.1.1.3540.004386
ORF1ab/nsp13300P300SCctTct11B.1.1.4850.016667
ORF1ab/nsp13300P300SCctTct11B.1.1.700.000341
ORF1ab/nsp13300P300SCctTct11B.1.1340.005464
ORF1ab/nsp13300P300SCctTct11B.1.177.520.001757
ORF1ab/nsp13300P300SCctTct11B.1.177.570.000281
ORF1ab/nsp13300P300SCctTct11B.1.177.600.000218
ORF1ab/nsp13300P300SCctTct11B.1.2210.000071
ORF1ab/nsp13300P300SCctTct11B.1.2320.000537
ORF1ab/nsp13300P300SCctTct11B.1.2400.000216
ORF1ab/nsp13300P300SCctTct11B.1.36.210.00216
ORF1ab/nsp13300P300SCctTct11B.1.4000.000429
ORF1ab/nsp13300P300SCctTct11B.1.4280.00102
ORF1ab/nsp13300P300SCctTct11B.1.466.20.000391
ORF1ab/nsp13300P300SCctTct11B.1.5460.003704
ORF1ab/nsp13300P300SCctTct11B.1.5610.000397
ORF1ab/nsp13300P300SCctTct11B.1.6210.000089
ORF1ab/nsp13300P300SCctTct11B.1.6370.000073
ORF1ab/nsp13300P300SCctTct11C.160.00106
ORF1ab/nsp13300P300SCctTct11P.1.150.000232
ORF1ab/nsp13300P300SCctTct11P.1.70.000319
ORF1ab/nsp13300P300SCctTct11R.10.00009