CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = P172S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13172P172SP5496SnonsynCctTct56735673116750-16752

Details of the mutation P172S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13172P172SCctTct56735673All0.001085
ORF1ab/nsp13172P172SCctTct15751575B.1.1.70.00141
ORF1ab/nsp13172P172SCctTct898898AY.40.001398
ORF1ab/nsp13172P172SCctTct278278B.1.617.20.001047
ORF1ab/nsp13172P172SCctTct261261B.1.20.002298
ORF1ab/nsp13172P172SCctTct216216AY.1030.001341
ORF1ab/nsp13172P172SCctTct211211AY.1200.007845
ORF1ab/nsp13172P172SCctTct176176AY.46.40.028952
ORF1ab/nsp13172P172SCctTct170170AY.260.004813
ORF1ab/nsp13172P172SCctTct139139AY.250.000836
ORF1ab/nsp13172P172SCctTct131131AY.430.00058
ORF1ab/nsp13172P172SCctTct9595AY.440.000578
ORF1ab/nsp13172P172SCctTct9494AY.1020.002492
ORF1ab/nsp13172P172SCctTct8181B.1.5260.001904
ORF1ab/nsp13172P172SCctTct7171AY.390.001755
ORF1ab/nsp13172P172SCctTct6868B.10.000623
ORF1ab/nsp13172P172SCctTct5555B.1.4290.001294
ORF1ab/nsp13172P172SCctTct5454AY.140.004753
ORF1ab/nsp13172P172SCctTct5353B.1.10.000961
ORF1ab/nsp13172P172SCctTct4848AY.1210.006495
ORF1ab/nsp13172P172SCctTct4848P.10.000756
ORF1ab/nsp13172P172SCctTct4444B.1.617.10.005674
ORF1ab/nsp13172P172SCctTct3333B.1.160.160.030669
ORF1ab/nsp13172P172SCctTct3030AY.1190.001059
ORF1ab/nsp13172P172SCctTct3030AY.270.001942
ORF1ab/nsp13172P172SCctTct3030AY.290.000473
ORF1ab/nsp13172P172SCctTct2828AY.30.000278
ORF1ab/nsp13172P172SCctTct2727B.1.1770.000356
ORF1ab/nsp13172P172SCctTct2525K.21
ORF1ab/nsp13172P172SCctTct2424B.1.3510.000713
ORF1ab/nsp13172P172SCctTct2323AY.4.20.000499
ORF1ab/nsp13172P172SCctTct2323Q.80.003793
ORF1ab/nsp13172P172SCctTct2222AY.39.10.000871
ORF1ab/nsp13172P172SCctTct2020AY.50.000413
ORF1ab/nsp13172P172SCctTct1919AY.450.002312
ORF1ab/nsp13172P172SCctTct1919B.1.36.210.041037
ORF1ab/nsp13172P172SCctTct1818AY.200.0007
ORF1ab/nsp13172P172SCctTct1717B.1.6370.001242
ORF1ab/nsp13172P172SCctTct1515B.1.36.160.021368
ORF1ab/nsp13172P172SCctTct1414AY.1000.000644
ORF1ab/nsp13172P172SCctTct1414B.1.1.5190.000556
ORF1ab/nsp13172P172SCctTct1212B.1.6210.001062
ORF1ab/nsp13172P172SCctTct1111B.1.3110.00302
ORF1ab/nsp13172P172SCctTct1111P.1.70.003512
ORF1ab/nsp13172P172SCctTct1010AY.4.50.001075
ORF1ab/nsp13172P172SCctTct99AY.240.003879
ORF1ab/nsp13172P172SCctTct99AY.460.000937
ORF1ab/nsp13172P172SCctTct99AY.980.000711
ORF1ab/nsp13172P172SCctTct99B.1.1.2160.008014
ORF1ab/nsp13172P172SCctTct99B.1.4270.000454
ORF1ab/nsp13172P172SCctTct99B.1.5960.000784
ORF1ab/nsp13172P172SCctTct99Q.70.01
ORF1ab/nsp13172P172SCctTct88AY.1130.001139
ORF1ab/nsp13172P172SCctTct88B.1.1600.00025
ORF1ab/nsp13172P172SCctTct88B.1.2430.000557
ORF1ab/nsp13172P172SCctTct88B.1.360.001167
ORF1ab/nsp13172P172SCctTct77A.2.50.003493
ORF1ab/nsp13172P172SCctTct77AY.330.000467
ORF1ab/nsp13172P172SCctTct77B.1.1.330.002946
ORF1ab/nsp13172P172SCctTct77R.10.00063
ORF1ab/nsp13172P172SCctTct66AY.1100.000676
ORF1ab/nsp13172P172SCctTct66AY.1180.000376
ORF1ab/nsp13172P172SCctTct66B.1.1.1410.012072
ORF1ab/nsp13172P172SCctTct66B.1.2210.000426
ORF1ab/nsp13172P172SCctTct66B.1.3960.004234
ORF1ab/nsp13172P172SCctTct66B.1.5250.000679
ORF1ab/nsp13172P172SCctTct66P.1.140.000287
ORF1ab/nsp13172P172SCctTct55AY.1170.000423
ORF1ab/nsp13172P172SCctTct55AY.540.000477
ORF1ab/nsp13172P172SCctTct55AY.750.00028
ORF1ab/nsp13172P172SCctTct55AY.9.20.000184
ORF1ab/nsp13172P172SCctTct55B0.000639
ORF1ab/nsp13172P172SCctTct55B.1.1.2260.02907
ORF1ab/nsp13172P172SCctTct55B.1.177.210.000382
ORF1ab/nsp13172P172SCctTct55B.1.2400.001078
ORF1ab/nsp13172P172SCctTct55B.1.2580.000333
ORF1ab/nsp13172P172SCctTct55B.1.5950.001305
ORF1ab/nsp13172P172SCctTct55B.1.6020.03268
ORF1ab/nsp13172P172SCctTct44AY.3.10.000341
ORF1ab/nsp13172P172SCctTct44AY.46.60.000289
ORF1ab/nsp13172P172SCctTct44AY.620.001743
ORF1ab/nsp13172P172SCctTct44AY.9.10.000335
ORF1ab/nsp13172P172SCctTct44AY.98.10.000194
ORF1ab/nsp13172P172SCctTct44B.1.1.5280.019231
ORF1ab/nsp13172P172SCctTct44P.1.150.000929
ORF1ab/nsp13172P172SCctTct33A.2.5.20.004717
ORF1ab/nsp13172P172SCctTct33AY.360.000445
ORF1ab/nsp13172P172SCctTct33AY.410.000882
ORF1ab/nsp13172P172SCctTct33AY.480.001395
ORF1ab/nsp13172P172SCctTct33AY.5.30.001012
ORF1ab/nsp13172P172SCctTct33AY.60.000123
ORF1ab/nsp13172P172SCctTct33AY.610.000314
ORF1ab/nsp13172P172SCctTct33AY.90.000203
ORF1ab/nsp13172P172SCctTct33B.1.1.1890.004539
ORF1ab/nsp13172P172SCctTct33B.1.1.2770.002276
ORF1ab/nsp13172P172SCctTct33B.1.1.3680.009259
ORF1ab/nsp13172P172SCctTct33B.1.2180.015464
ORF1ab/nsp13172P172SCctTct33B.1.258.140.002941
ORF1ab/nsp13172P172SCctTct33B.1.4000.001287
ORF1ab/nsp13172P172SCctTct33B.1.5820.001472
ORF1ab/nsp13172P172SCctTct33B.1.5870.005693
ORF1ab/nsp13172P172SCctTct22AY.20.000712
ORF1ab/nsp13172P172SCctTct22AY.230.000139
ORF1ab/nsp13172P172SCctTct22AY.490.00639
ORF1ab/nsp13172P172SCctTct22AY.530.000575
ORF1ab/nsp13172P172SCctTct22AY.640.00119
ORF1ab/nsp13172P172SCctTct22AY.790.002421
ORF1ab/nsp13172P172SCctTct22AY.830.003448
ORF1ab/nsp13172P172SCctTct22AY.850.000854
ORF1ab/nsp13172P172SCctTct22AY.99.20.000184
ORF1ab/nsp13172P172SCctTct22B.1.1.1010.02
ORF1ab/nsp13172P172SCctTct22B.1.1.2790.002242
ORF1ab/nsp13172P172SCctTct22B.1.1.3260.003521
ORF1ab/nsp13172P172SCctTct22B.1.1.3480.001592
ORF1ab/nsp13172P172SCctTct22B.1.177.860.000367
ORF1ab/nsp13172P172SCctTct22B.1.258.170.000208
ORF1ab/nsp13172P172SCctTct22B.1.36.290.001035
ORF1ab/nsp13172P172SCctTct22B.1.36.80.002
ORF1ab/nsp13172P172SCctTct22B.1.3610.002577
ORF1ab/nsp13172P172SCctTct22B.1.5750.000607
ORF1ab/nsp13172P172SCctTct22C.36.30.001134
ORF1ab/nsp13172P172SCctTct22C.370.000232
ORF1ab/nsp13172P172SCctTct22P.1.10.000635
ORF1ab/nsp13172P172SCctTct22P.1.120.000968
ORF1ab/nsp13172P172SCctTct22P.1.170.000324
ORF1ab/nsp13172P172SCctTct22P.20.000373
ORF1ab/nsp13172P172SCctTct22Q.10.000253
ORF1ab/nsp13172P172SCctTct11A.10.000282
ORF1ab/nsp13172P172SCctTct11A.190.009434
ORF1ab/nsp13172P172SCctTct11AE.10.011364
ORF1ab/nsp13172P172SCctTct11AY.1060.000335
ORF1ab/nsp13172P172SCctTct11AY.1110.000183
ORF1ab/nsp13172P172SCctTct11AY.1140.000231
ORF1ab/nsp13172P172SCctTct11AY.1160.000287
ORF1ab/nsp13172P172SCctTct11AY.116.10.000311
ORF1ab/nsp13172P172SCctTct11AY.160.00038
ORF1ab/nsp13172P172SCctTct11AY.29.10.000221
ORF1ab/nsp13172P172SCctTct11AY.320.000532
ORF1ab/nsp13172P172SCctTct11AY.340.000097
ORF1ab/nsp13172P172SCctTct11AY.380.000499
ORF1ab/nsp13172P172SCctTct11AY.400.000964
ORF1ab/nsp13172P172SCctTct11AY.420.00004
ORF1ab/nsp13172P172SCctTct11AY.46.10.001027
ORF1ab/nsp13172P172SCctTct11AY.470.000031
ORF1ab/nsp13172P172SCctTct11AY.5.40.000277
ORF1ab/nsp13172P172SCctTct11AY.500.000799
ORF1ab/nsp13172P172SCctTct11AY.700.000209
ORF1ab/nsp13172P172SCctTct11B.1.1.10.000327
ORF1ab/nsp13172P172SCctTct11B.1.1.1760.000439
ORF1ab/nsp13172P172SCctTct11B.1.1.2140.000055
ORF1ab/nsp13172P172SCctTct11B.1.1.2310.003096
ORF1ab/nsp13172P172SCctTct11B.1.1.250.000569
ORF1ab/nsp13172P172SCctTct11B.1.1.2630.001558
ORF1ab/nsp13172P172SCctTct11B.1.1.2750.011236
ORF1ab/nsp13172P172SCctTct11B.1.1.280.000311
ORF1ab/nsp13172P172SCctTct11B.1.1.2820.011628
ORF1ab/nsp13172P172SCctTct11B.1.1.2840.000107
ORF1ab/nsp13172P172SCctTct11B.1.1.2970.002237
ORF1ab/nsp13172P172SCctTct11B.1.1.3060.000438
ORF1ab/nsp13172P172SCctTct11B.1.1.3160.000925
ORF1ab/nsp13172P172SCctTct11B.1.1.3170.000412
ORF1ab/nsp13172P172SCctTct11B.1.1.3330.001076
ORF1ab/nsp13172P172SCctTct11B.1.1.3720.000689
ORF1ab/nsp13172P172SCctTct11B.1.1.4090.002833
ORF1ab/nsp13172P172SCctTct11B.1.1.510.001718
ORF1ab/nsp13172P172SCctTct11B.1.1.5250.005464
ORF1ab/nsp13172P172SCctTct11B.1.1.890.006061
ORF1ab/nsp13172P172SCctTct11B.1.1080.005814
ORF1ab/nsp13172P172SCctTct11B.1.110.30.000718
ORF1ab/nsp13172P172SCctTct11B.1.160.120.00641
ORF1ab/nsp13172P172SCctTct11B.1.160.250.011111
ORF1ab/nsp13172P172SCctTct11B.1.177.120.000152
ORF1ab/nsp13172P172SCctTct11B.1.177.170.000821
ORF1ab/nsp13172P172SCctTct11B.1.177.450.000381
ORF1ab/nsp13172P172SCctTct11B.1.177.500.004695
ORF1ab/nsp13172P172SCctTct11B.1.177.570.000281
ORF1ab/nsp13172P172SCctTct11B.1.177.580.001332
ORF1ab/nsp13172P172SCctTct11B.1.177.600.000218
ORF1ab/nsp13172P172SCctTct11B.1.177.870.000728
ORF1ab/nsp13172P172SCctTct11B.1.1890.004292
ORF1ab/nsp13172P172SCctTct11B.1.1990.004132
ORF1ab/nsp13172P172SCctTct11B.1.2320.000537
ORF1ab/nsp13172P172SCctTct11B.1.2700.005618
ORF1ab/nsp13172P172SCctTct11B.1.2790.000514
ORF1ab/nsp13172P172SCctTct11B.1.30.002618
ORF1ab/nsp13172P172SCctTct11B.1.3330.010526
ORF1ab/nsp13172P172SCctTct11B.1.3360.002439
ORF1ab/nsp13172P172SCctTct11B.1.351.20.000303
ORF1ab/nsp13172P172SCctTct11B.1.36.10.00114
ORF1ab/nsp13172P172SCctTct11B.1.36.360.000602
ORF1ab/nsp13172P172SCctTct11B.1.36.90.003215
ORF1ab/nsp13172P172SCctTct11B.1.3670.000792
ORF1ab/nsp13172P172SCctTct11B.1.3690.000285
ORF1ab/nsp13172P172SCctTct11B.1.429.10.012048
ORF1ab/nsp13172P172SCctTct11B.1.4330.003195
ORF1ab/nsp13172P172SCctTct11B.1.438.10.000107
ORF1ab/nsp13172P172SCctTct11B.1.4680.005714
ORF1ab/nsp13172P172SCctTct11B.1.5300.007143
ORF1ab/nsp13172P172SCctTct11B.1.5510.00129
ORF1ab/nsp13172P172SCctTct11B.1.5710.009709
ORF1ab/nsp13172P172SCctTct11B.1.5770.000687
ORF1ab/nsp13172P172SCctTct11B.1.6120.002653
ORF1ab/nsp13172P172SCctTct11B.1.619.10.000641
ORF1ab/nsp13172P172SCctTct11B.1.621.10.000506
ORF1ab/nsp13172P172SCctTct11B.1.6280.000352
ORF1ab/nsp13172P172SCctTct11B.1.6290.013333
ORF1ab/nsp13172P172SCctTct11B.260.014706
ORF1ab/nsp13172P172SCctTct11C.310.017857
ORF1ab/nsp13172P172SCctTct11N.50.001767
ORF1ab/nsp13172P172SCctTct11P.1.17.10.000875
ORF1ab/nsp13172P172SCctTct11Q.30.000145