CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = L63P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1363L63PL5387PnonsyncTtcCt26240.92307716423-16425
ORF1ab/nsp1363L63PL5387PnonsyncTTcCC2610.038461516423-16425
ORF1ab/nsp1363L63PL5387PnonsyncTTcCA2610.038461516423-16425

Details of the mutation L63P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1363L63PcTtcCt2426All0.000005
ORF1ab/nsp1363L63PcTTcCA126All0
ORF1ab/nsp1363L63PcTTcCC126All0
ORF1ab/nsp1363L63PcTtcCt66B.1.1.70.000005
ORF1ab/nsp1363L63PcTTcCA12AY.990.001049
ORF1ab/nsp1363L63PcTtcCt12AY.990.001049
ORF1ab/nsp1363L63PcTtcCt22B.1.10.000036
ORF1ab/nsp1363L63PcTtcCt22B.1.20.000018
ORF1ab/nsp1363L63PcTtcCt110.055556
ORF1ab/nsp1363L63PcTtcCt11AD.20.000219
ORF1ab/nsp1363L63PcTtcCt11AY.116.10.000311
ORF1ab/nsp1363L63PcTtcCt11AY.250.000006
ORF1ab/nsp1363L63PcTtcCt11AY.40.000002
ORF1ab/nsp1363L63PcTTcCC11AY.440.000006
ORF1ab/nsp1363L63PcTtcCt11B.1.1.10.000327
ORF1ab/nsp1363L63PcTtcCt11B.1.1.3650.005587
ORF1ab/nsp1363L63PcTtcCt11B.1.1.410.006329
ORF1ab/nsp1363L63PcTtcCt11B.1.5680.001111
ORF1ab/nsp1363L63PcTtcCt11B.1.617.20.000004
ORF1ab/nsp1363L63PcTtcCt11B.1.6210.000089
ORF1ab/nsp1363L63PcTtcCt11B.400.000364
ORF1ab/nsp1363L63PcTtcCt11D.20.000075