CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp13 | 227 | L227L | L5551L | syn | Ctg | Ttg | 20263 | 16182 | 0.798598 | 16915-16917 |
ORF1ab/nsp13 | 227 | L227L | L5551L | syn | ctG | ctT | 20263 | 3225 | 0.159157 | 16915-16917 |
ORF1ab/nsp13 | 227 | L227L | L5551L | syn | ctG | ctA | 20263 | 810 | 0.0399743 | 16915-16917 |
ORF1ab/nsp13 | 227 | L227L | L5551L | syn | ctG | ctC | 20263 | 44 | 0.00217145 | 16915-16917 |
ORF1ab/nsp13 | 227 | L227L | L5551L | syn | CtG | TtA | 20263 | 2 | 0.0000987021 | 16915-16917 |
Details of the mutation L227L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 16182 | 20263 | All | 0.003095 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 3225 | 20263 | All | 0.000617 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 810 | 20263 | All | 0.000155 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctC | 44 | 20263 | All | 0.000008 |
ORF1ab/nsp13 | 227 | L227L | CtG | TtA | 2 | 20263 | All | 0 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 4919 | 5114 | B.1.617.2 | 0.018522 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 189 | 5114 | B.1.617.2 | 0.000712 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctC | 5 | 5114 | B.1.617.2 | 0.000019 |
ORF1ab/nsp13 | 227 | L227L | CtG | TtA | 1 | 5114 | B.1.617.2 | 0.000004 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 3937 | 4425 | B.1.1.7 | 0.003524 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 458 | 4425 | B.1.1.7 | 0.00041 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 29 | 4425 | B.1.1.7 | 0.000026 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctC | 1 | 4425 | B.1.1.7 | 0.000001 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 4173 | 4173 | AY.35 | 0.972501 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 814 | 816 | B.1.561 | 0.323144 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctC | 2 | 816 | B.1.561 | 0.000794 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 620 | 620 | B.1.1.523 | 0.96875 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 248 | 533 | AY.4 | 0.000386 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 247 | 533 | AY.4 | 0.000384 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 23 | 533 | AY.4 | 0.000036 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctC | 15 | 533 | AY.4 | 0.000023 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 364 | 364 | B.1.471 | 0.994536 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 277 | 363 | AY.43 | 0.001227 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 82 | 363 | AY.43 | 0.000363 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 3 | 363 | AY.43 | 0.000013 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctC | 1 | 363 | AY.43 | 0.000004 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 248 | 249 | AY.16.1 | 0.116541 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 249 | AY.16.1 | 0.00047 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 201 | 240 | AY.44 | 0.001223 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 37 | 240 | AY.44 | 0.000225 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctC | 2 | 240 | AY.44 | 0.000012 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 220 | 220 | B.1.1.348 | 0.175159 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 122 | 191 | B.1 | 0.001117 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 68 | 191 | B.1 | 0.000623 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 1 | 191 | B.1 | 0.000009 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 172 | 177 | AY.48 | 0.08 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 5 | 177 | AY.48 | 0.002326 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 91 | 133 | AY.3 | 0.000905 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 42 | 133 | AY.3 | 0.000418 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 121 | 122 | AY.13 | 0.019478 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 122 | AY.13 | 0.000161 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 97 | 120 | B.1.2 | 0.000854 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 22 | 120 | B.1.2 | 0.000194 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctC | 1 | 120 | B.1.2 | 0.000009 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 93 | 119 | AY.25 | 0.000559 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 26 | 119 | AY.25 | 0.000156 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 57 | 113 | AY.103 | 0.000354 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 33 | 113 | AY.103 | 0.000205 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 23 | 113 | AY.103 | 0.000143 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 63 | 101 | B.1.258 | 0.004192 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 38 | 101 | B.1.258 | 0.002529 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 88 | 99 | AY.4.2 | 0.001909 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 9 | 99 | AY.4.2 | 0.000195 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 2 | 99 | AY.4.2 | 0.000043 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 44 | 83 | B.1.177 | 0.000579 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 37 | 83 | B.1.177 | 0.000487 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctC | 2 | 83 | B.1.177 | 0.000026 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 73 | 73 | AY.108 | 0.080485 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 60 | 68 | AY.23 | 0.004185 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 8 | 68 | AY.23 | 0.000558 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 41 | 63 | P.1 | 0.000646 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 19 | 63 | P.1 | 0.000299 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 3 | 63 | P.1 | 0.000047 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 49 | 56 | B.1.427 | 0.002474 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 7 | 56 | B.1.427 | 0.000353 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 46 | 55 | B.1.429 | 0.001082 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 9 | 55 | B.1.429 | 0.000212 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 20 | 49 | B.1.1 | 0.000363 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 15 | 49 | B.1.1 | 0.000272 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 14 | 49 | B.1.1 | 0.000254 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 28 | 47 | AY.39.1 | 0.001109 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 19 | 47 | AY.39.1 | 0.000753 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 18 | 41 | B.1.351 | 0.000535 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 13 | 41 | B.1.351 | 0.000386 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 10 | 41 | B.1.351 | 0.000297 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 36 | 37 | AY.19 | 0.041049 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 37 | AY.19 | 0.00114 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 36 | 37 | B.1.128 | 0.022872 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 37 | B.1.128 | 0.000635 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 23 | 33 | AY.5 | 0.000475 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 10 | 33 | AY.5 | 0.000206 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 19 | 32 | AY.39 | 0.00047 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 13 | 32 | AY.39 | 0.000321 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 32 | 32 | B.1.1.222 | 0.006528 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 32 | 32 | N.8 | 1 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 17 | 30 | AY.102 | 0.000451 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 12 | 30 | AY.102 | 0.000318 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctC | 1 | 30 | AY.102 | 0.000027 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 29 | 29 | AY.32 | 0.015442 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 26 | 27 | AY.68 | 0.007117 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 27 | AY.68 | 0.000274 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 13 | 27 | B.1.160 | 0.000405 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 11 | 27 | B.1.160 | 0.000343 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 3 | 27 | B.1.160 | 0.000094 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 21 | 27 | B.1.526 | 0.000494 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 4 | 27 | B.1.526 | 0.000094 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 2 | 27 | B.1.526 | 0.000047 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 24 | 25 | AY.27 | 0.001553 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 25 | AY.27 | 0.000065 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 20 | 24 | B.1.617.1 | 0.002579 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 4 | 24 | B.1.617.1 | 0.000516 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 12 | 23 | AY.100 | 0.000552 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 8 | 23 | AY.100 | 0.000368 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 2 | 23 | AY.100 | 0.000092 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctC | 1 | 23 | AY.100 | 0.000046 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 20 | 23 | AY.5.4 | 0.005534 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 3 | 23 | AY.5.4 | 0.00083 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 14 | 23 | B.1.1.519 | 0.000556 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 9 | 23 | B.1.1.519 | 0.000357 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 21 | 21 | B.1.1.192 | 0.048499 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 11 | 20 | AY.118 | 0.000689 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 9 | 20 | AY.118 | 0.000564 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 17 | 20 | AY.36 | 0.00252 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 3 | 20 | AY.36 | 0.000445 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 18 | 19 | AY.116 | 0.005162 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 19 | AY.116 | 0.000287 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 11 | 19 | AY.20 | 0.000428 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 8 | 19 | AY.20 | 0.000311 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 19 | 19 | AY.52 | 0.015472 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 16 | 19 | R.1 | 0.00144 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 3 | 19 | R.1 | 0.00027 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 17 | 18 | B.1.221 | 0.001208 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 18 | B.1.221 | 0.000071 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 17 | 17 | B.1.177.72 | 0.057627 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 12 | 16 | AY.47 | 0.000373 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 4 | 16 | AY.47 | 0.000124 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 11 | 16 | B.1.243 | 0.000765 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 5 | 16 | B.1.243 | 0.000348 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 10 | 16 | B.1.517 | 0.00427 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 6 | 16 | B.1.517 | 0.002562 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 15 | 15 | AY.4.1 | 0.011062 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 11 | 15 | AY.45 | 0.001339 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 4 | 15 | AY.45 | 0.000487 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 14 | 15 | AY.98.1 | 0.000678 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 15 | AY.98.1 | 0.000048 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 7 | 14 | AY.33 | 0.000467 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 5 | 14 | AY.33 | 0.000334 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 14 | AY.33 | 0.000134 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 13 | 14 | AY.62 | 0.005664 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 14 | AY.62 | 0.000436 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 8 | 13 | AY.26 | 0.000226 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 5 | 13 | AY.26 | 0.000142 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 7 | 13 | AY.29 | 0.00011 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 6 | 13 | AY.29 | 0.000095 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 9 | 13 | B.1.621.1 | 0.004552 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 4 | 13 | B.1.621.1 | 0.002023 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 9 | 12 | AY.75 | 0.000504 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 3 | 12 | AY.75 | 0.000168 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 7 | 11 | AY.117 | 0.000592 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 4 | 11 | AY.117 | 0.000338 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 9 | 11 | AY.98 | 0.000711 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 11 | AY.98 | 0.000158 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 7 | 11 | AY.99.2 | 0.000645 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 4 | 11 | AY.99.2 | 0.000369 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 11 | 11 | P.1.6 | 0.021401 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 10 | 10 | AY.106 | 0.003349 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 9 | 10 | AY.121 | 0.001218 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 10 | AY.121 | 0.000135 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 8 | 10 | AY.46 | 0.000833 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 10 | AY.46 | 0.000208 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 9 | 10 | AY.54 | 0.000858 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 10 | AY.54 | 0.000095 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 10 | 10 | B.1.218 | 0.051546 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 8 | 10 | D.2 | 0.0006 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctC | 1 | 10 | D.2 | 0.000075 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 10 | D.2 | 0.000075 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 7 | 9 | AY.42 | 0.000282 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 9 | AY.42 | 0.00008 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 5 | 9 | B | 0.000639 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 3 | 9 | B | 0.000383 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 1 | 9 | B | 0.000128 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 5 | 9 | B.1.1.214 | 0.000277 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 4 | 9 | B.1.1.214 | 0.000222 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 7 | 9 | B.1.36 | 0.001021 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 9 | B.1.36 | 0.000292 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 8 | 9 | B.1.596 | 0.000697 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 9 | B.1.596 | 0.000087 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 8 | 8 | AY.24 | 0.003448 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 8 | 8 | AY.55 | 0.007339 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 8 | 8 | B.1.621 | 0.000708 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 4 | 7 | AY.119 | 0.000141 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 7 | AY.119 | 0.000071 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 1 | 7 | AY.119 | 0.000035 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 4 | 7 | AY.6 | 0.000165 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 3 | 7 | AY.6 | 0.000123 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 4 | 7 | AY.61 | 0.000419 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 7 | AY.61 | 0.00021 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 1 | 7 | AY.61 | 0.000105 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 7 | 7 | AY.77 | 0.007892 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 6 | 7 | B.1.131 | 0.052632 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 7 | B.1.131 | 0.008772 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 3 | 6 | AY.12 | 0.000948 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 3 | 6 | AY.12 | 0.000948 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 4 | 6 | AY.34 | 0.000388 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 6 | AY.34 | 0.000194 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 5 | 6 | AY.5.3 | 0.001687 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 6 | AY.5.3 | 0.000337 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 6 | 6 | AY.7.2 | 0.003356 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctC | 4 | 6 | AY.9.2 | 0.000147 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 6 | AY.9.2 | 0.000073 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 6 | 6 | B.1.1.1 | 0.00196 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 6 | 6 | B.1.1.305 | 0.023166 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 5 | 6 | B.1.258.17 | 0.00052 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 6 | B.1.258.17 | 0.000104 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 4 | 6 | B.1.577 | 0.002749 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 6 | B.1.577 | 0.001375 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 4 | 6 | P.1.15 | 0.000929 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 6 | P.1.15 | 0.000465 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 6 | 6 | W.2 | 0.028986 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 4 | 5 | AY.3.1 | 0.000341 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 5 | AY.3.1 | 0.000085 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 4 | 5 | AY.89 | 0.019608 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 5 | AY.89 | 0.004902 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 4 | 5 | AY.92 | 0.001149 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 5 | AY.92 | 0.000287 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 5 | 5 | B.1.1.135 | 0.023474 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 5 | 5 | B.1.234 | 0.00066 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 5 | 5 | B.1.36.29 | 0.002587 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 5 | 5 | B.1.375 | 0.004098 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 3 | 5 | B.1.595 | 0.000783 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 5 | B.1.595 | 0.000522 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 3 | 5 | C.37 | 0.000348 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 5 | C.37 | 0.000232 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 5 | 5 | P.1.7 | 0.001596 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 2 | 4 | 0.111111 | |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 4 | 0.055556 | |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 4 | 0.055556 | |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 4 | AY.116.1 | 0.000623 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 4 | AY.116.1 | 0.000623 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 4 | 4 | AY.120 | 0.000149 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 4 | 4 | AY.30 | 0.001583 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 3 | 4 | AY.37 | 0.000948 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 4 | AY.37 | 0.000316 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 4 | 4 | AY.58 | 0.00363 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 4 | AY.84 | 0.000437 |
ORF1ab/nsp13 | 227 | L227L | CtG | TtA | 1 | 4 | AY.84 | 0.000437 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 4 | AY.84 | 0.000437 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 1 | 4 | AY.84 | 0.000437 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 2 | 4 | AY.85 | 0.000854 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 4 | AY.85 | 0.000427 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 4 | AY.85 | 0.000427 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 4 | 4 | AY.87 | 0.003331 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 4 | 4 | AY.88 | 0.003537 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 3 | 4 | AY.91 | 0.002191 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 4 | AY.91 | 0.00073 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctC | 3 | 4 | AY.94 | 0.001328 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 4 | AY.94 | 0.000443 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 4 | B.1.1.28 | 0.000622 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 1 | 4 | B.1.1.28 | 0.000311 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 4 | B.1.1.28 | 0.000311 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 4 | 4 | B.1.1.318 | 0.001207 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 4 | 4 | B.1.1.398 | 0.012903 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 4 | 4 | B.1.1.416 | 0.00362 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 4 | 4 | B.1.177.4 | 0.000844 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 4 | B.1.214.3 | 0.014286 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 4 | B.1.214.3 | 0.014286 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 3 | 4 | B.1.36.17 | 0.001482 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 4 | B.1.36.17 | 0.000494 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 4 | 4 | B.1.466.2 | 0.001565 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 4 | B.1.525 | 0.000226 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 4 | B.1.525 | 0.000113 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 1 | 4 | B.1.525 | 0.000113 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 4 | 4 | B.1.637 | 0.000292 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 3 | 4 | C.36 | 0.002732 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 1 | 4 | C.36 | 0.000911 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 3 | 4 | P.1.14 | 0.000143 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 4 | P.1.14 | 0.000048 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 3 | 3 | A.2.5.2 | 0.004717 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 3 | 3 | A.29 | 0.015957 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 3 | AY.113 | 0.000285 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 1 | 3 | AY.113 | 0.000142 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 3 | AY.14 | 0.000176 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctC | 1 | 3 | AY.14 | 0.000088 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 3 | 3 | AY.65 | 0.001599 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 3 | AY.70 | 0.000417 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 3 | AY.70 | 0.000209 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 3 | AY.9 | 0.000135 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctC | 1 | 3 | AY.9 | 0.000068 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 3 | B.1.1.306 | 0.000877 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 3 | B.1.1.306 | 0.000438 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 3 | 3 | B.1.1.317 | 0.001235 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 3 | 3 | B.1.1.417 | 0.008108 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 3 | B.1.177.12 | 0.000303 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 3 | B.1.177.12 | 0.000152 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 3 | B.1.177.73 | 0.001133 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctC | 1 | 3 | B.1.177.73 | 0.000566 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 3 | B.1.582 | 0.000981 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 3 | B.1.582 | 0.000491 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 3 | 3 | B.1.609 | 0.001438 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 3 | N.4 | 0.008511 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 3 | N.4 | 0.004255 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 2 | A.1 | 0.000282 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 2 | A.1 | 0.000282 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 2 | A.2.5 | 0.000998 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 2 | AY.101 | 0.000981 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 2 | AY.29.1 | 0.000441 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 2 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 2 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 2 | AY.4.3 | 0.000842 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 2 | AY.4.3 | 0.000842 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 2 | AY.40 | 0.000964 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 2 | AY.40 | 0.000964 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 2 | AY.41 | 0.000588 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 2 | AY.46.6 | 0.000144 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 2 | AY.50 | 0.001599 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 2 | AY.53 | 0.000288 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 2 | AY.53 | 0.000288 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 2 | AY.63 | 0.000387 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 2 | AY.63 | 0.000387 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 2 | AY.64 | 0.00119 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 2 | AY.69 | 0.000373 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 1 | 2 | AY.75.1 | 0.00018 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 2 | AY.75.1 | 0.00018 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 2 | AY.9.1 | 0.000084 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 2 | AY.9.1 | 0.000084 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 2 | AY.93 | 0.000546 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 2 | B.1.1.232 | 0.00363 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 2 | B.1.1.258 | 0.003257 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 2 | B.1.1.258 | 0.003257 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 2 | B.1.1.29 | 0.020619 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 2 | B.1.1.63 | 0.000772 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 2 | B.1.111 | 0.001175 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 1 | 2 | B.1.111 | 0.001175 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 2 | B.1.177.51 | 0.009132 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 2 | B.1.232 | 0.000537 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 2 | B.1.232 | 0.000537 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 2 | B.1.241 | 0.001623 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 2 | B.1.273 | 0.025974 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 2 | B.1.366 | 0.009756 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 2 | B.1.370 | 0.016 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 2 | B.1.400 | 0.000858 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 2 | B.1.438.1 | 0.000215 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 2 | B.1.588 | 0.00182 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 2 | B.3 | 0.000831 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 2 | B.3 | 0.000831 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 2 | B.40 | 0.000729 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 2 | C.14 | 0.008658 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 2 | 2 | P.1.1 | 0.000635 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 2 | 2 | P.1.17 | 0.000324 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 2 | P.3 | 0.001595 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 2 | P.3 | 0.001595 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | A.2.4 | 0.003367 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | A.5 | 0.001923 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | AL.1 | 0.012987 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | AN.1 | 0.02 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | AY.28 | 0.00189 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | AY.46.3 | 0.000934 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | AY.49 | 0.003195 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | AY.56 | 0.001605 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | AY.72 | 0.001361 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | AY.82 | 0.001357 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | AZ.2 | 0.000821 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.1.133 | 0.008475 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 1 | 1 | B.1.1.161 | 0.003534 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.1.312 | 0.001912 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.1.349 | 0.010309 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.1.351 | 0.002793 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.1.421 | 0.030303 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.1.432 | 0.001266 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctA | 1 | 1 | B.1.1.525 | 0.005464 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.1.58 | 0.005376 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.1.62 | 0.027027 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.146 | 0.004237 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.160.20 | 0.008929 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.160.25 | 0.011111 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.160.30 | 0.002976 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.160.7 | 0.002079 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.177.15 | 0.000631 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.177.32 | 0.00135 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.177.42 | 0.000894 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctC | 1 | 1 | B.1.177.5 | 0.001242 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.177.65 | 0.000665 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.177.82 | 0.000477 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.177.87 | 0.000728 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.177.9 | 0.001332 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.22 | 0.001318 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.258.14 | 0.00098 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.289 | 0.00266 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.3 | 0.002618 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctC | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.389 | 0.001002 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.421 | 0.007463 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.460 | 0.017857 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.474 | 0.001901 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.492 | 0.007042 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.521 | 0.004975 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.610 | 0.003546 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | B.1.9.4 | 0.006135 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | N.10 | 0.029412 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | P.6 | 0.003145 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp13 | 227 | L227L | Ctg | Ttg | 1 | 1 | Q.4 | 0.000455 |
ORF1ab/nsp13 | 227 | L227L | ctG | ctT | 1 | 1 | Q.8 | 0.000165 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|