CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = L176F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13176L176FL5500FnonsynCttTtt231923150.99827516762-16764
ORF1ab/nsp13176L176FL5500FnonsynCtTTtC231940.0017248816762-16764

Details of the mutation L176F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13176L176FCttTtt23152319All0.000443
ORF1ab/nsp13176L176FCtTTtC42319All0.000001
ORF1ab/nsp13176L176FCttTtt713713B.1.3460.934469
ORF1ab/nsp13176L176FCttTtt185185B.1.617.20.000697
ORF1ab/nsp13176L176FCttTtt183183B.1.6230.098176
ORF1ab/nsp13176L176FCttTtt179179B.10.00164
ORF1ab/nsp13176L176FCttTtt8585B.1.1.70.000076
ORF1ab/nsp13176L176FCttTtt8383AY.430.000368
ORF1ab/nsp13176L176FCttTtt7373B.1.4521
ORF1ab/nsp13176L176FCttTtt6262B.1.5690.898551
ORF1ab/nsp13176L176FCttTtt5959AY.1020.001564
ORF1ab/nsp13176L176FCttTtt5353AY.40.000082
ORF1ab/nsp13176L176FCttTtt5252AY.30.000517
ORF1ab/nsp13176L176FCttTtt5151B.550.150442
ORF1ab/nsp13176L176FCttTtt4444B.1.20.000387
ORF1ab/nsp13176L176FCttTtt3030AY.250.00018
ORF1ab/nsp13176L176FCttTtt2828AY.4.20.000607
ORF1ab/nsp13176L176FCttTtt2828B.1.6370.002046
ORF1ab/nsp13176L176FCttTtt2525B.1.1.4830.961538
ORF1ab/nsp13176L176FCttTtt2323B.1.10.000417
ORF1ab/nsp13176L176FCttTtt2222B.1.2080.88
ORF1ab/nsp13176L176FCttTtt1919P.10.000299
ORF1ab/nsp13176L176FCttTtt1718AY.440.000103
ORF1ab/nsp13176L176FCtTTtC118AY.440.000006
ORF1ab/nsp13176L176FCttTtt1818P.1.140.00086
ORF1ab/nsp13176L176FCttTtt1616B.1.438.10.001716
ORF1ab/nsp13176L176FCttTtt1515D.41
ORF1ab/nsp13176L176FCttTtt1313AY.290.000205
ORF1ab/nsp13176L176FCttTtt1111AY.1030.000068
ORF1ab/nsp13176L176FCttTtt1111B.1.5950.002871
ORF1ab/nsp13176L176FCttTtt88AY.1190.000282
ORF1ab/nsp13176L176FCttTtt88AY.260.000226
ORF1ab/nsp13176L176FCttTtt88AY.4.10.0059
ORF1ab/nsp13176L176FCttTtt88B.1.2430.000557
ORF1ab/nsp13176L176FCttTtt66B.1.6210.000531
ORF1ab/nsp13176L176FCttTtt55AY.10.001979
ORF1ab/nsp13176L176FCttTtt55AY.390.000124
ORF1ab/nsp13176L176FCttTtt55B.1.3510.000149
ORF1ab/nsp13176L176FCttTtt55B.1.5610.001985
ORF1ab/nsp13176L176FCttTtt55B.1.617.10.000645
ORF1ab/nsp13176L176FCttTtt44AY.39.10.000158
ORF1ab/nsp13176L176FCttTtt44AY.90.00027
ORF1ab/nsp13176L176FCttTtt44AY.9.10.000335
ORF1ab/nsp13176L176FCttTtt44B.1.1.5190.000159
ORF1ab/nsp13176L176FCttTtt44B.1.1810.078431
ORF1ab/nsp13176L176FCttTtt44B.1.621.10.002023
ORF1ab/nsp13176L176FCttTtt330.166667
ORF1ab/nsp13176L176FCttTtt33AY.120.000948
ORF1ab/nsp13176L176FCttTtt33AY.200.000117
ORF1ab/nsp13176L176FCttTtt33AY.470.000093
ORF1ab/nsp13176L176FCttTtt33AY.50.000062
ORF1ab/nsp13176L176FCttTtt33AY.610.000314
ORF1ab/nsp13176L176FCttTtt33AY.700.000626
ORF1ab/nsp13176L176FCttTtt33AY.99.20.000276
ORF1ab/nsp13176L176FCttTtt33B.1.1.10.00098
ORF1ab/nsp13176L176FCttTtt33B.1.1770.00004
ORF1ab/nsp13176L176FCttTtt33B.1.2210.000213
ORF1ab/nsp13176L176FCttTtt33B.1.3240.004815
ORF1ab/nsp13176L176FCttTtt33B.1.360.000438
ORF1ab/nsp13176L176FCttTtt33B.1.4270.000151
ORF1ab/nsp13176L176FCtTTtC23B.1.466.20.000782
ORF1ab/nsp13176L176FCttTtt13B.1.466.20.000391
ORF1ab/nsp13176L176FCttTtt33B.1.5180.035294
ORF1ab/nsp13176L176FCttTtt33B.1.5640.001278
ORF1ab/nsp13176L176FCttTtt33B.1.6130.081081
ORF1ab/nsp13176L176FCttTtt22AY.120.2.10.000997
ORF1ab/nsp13176L176FCttTtt22AY.5.40.000553
ORF1ab/nsp13176L176FCttTtt22AY.70.000392
ORF1ab/nsp13176L176FCttTtt22AY.750.000112
ORF1ab/nsp13176L176FCttTtt22AY.900.001369
ORF1ab/nsp13176L176FCttTtt22B.1.1.3060.000877
ORF1ab/nsp13176L176FCttTtt22B.1.1.480.005747
ORF1ab/nsp13176L176FCttTtt22B.1.1600.000062
ORF1ab/nsp13176L176FCttTtt22B.1.177.830.002963
ORF1ab/nsp13176L176FCttTtt22B.1.36.290.001035
ORF1ab/nsp13176L176FCttTtt22B.1.4990.002101
ORF1ab/nsp13176L176FCttTtt22B.1.5260.000047
ORF1ab/nsp13176L176FCttTtt22B.1.5960.000174
ORF1ab/nsp13176L176FCttTtt22D.20.00015
ORF1ab/nsp13176L176FCttTtt11AD.20.000219
ORF1ab/nsp13176L176FCttTtt11AY.1000.000046
ORF1ab/nsp13176L176FCttTtt11AY.1180.000063
ORF1ab/nsp13176L176FCttTtt11AY.1210.000135
ORF1ab/nsp13176L176FCttTtt11AY.140.000088
ORF1ab/nsp13176L176FCttTtt11AY.230.00007
ORF1ab/nsp13176L176FCttTtt11AY.340.000097
ORF1ab/nsp13176L176FCttTtt11AY.4.40.000409
ORF1ab/nsp13176L176FCttTtt11AY.420.00004
ORF1ab/nsp13176L176FCttTtt11AY.460.000104
ORF1ab/nsp13176L176FCttTtt11AY.46.20.000635
ORF1ab/nsp13176L176FCttTtt11AY.510.000909
ORF1ab/nsp13176L176FCtTTtC11AY.75.10.00018
ORF1ab/nsp13176L176FCttTtt11AY.920.000287
ORF1ab/nsp13176L176FCttTtt11AY.940.000443
ORF1ab/nsp13176L176FCttTtt11AY.960.002075
ORF1ab/nsp13176L176FCttTtt11B0.000128
ORF1ab/nsp13176L176FCttTtt11B.1.1.2140.000055
ORF1ab/nsp13176L176FCttTtt11B.1.1.2200.001859
ORF1ab/nsp13176L176FCttTtt11B.1.1.2690.001353
ORF1ab/nsp13176L176FCttTtt11B.1.1.3010.001179
ORF1ab/nsp13176L176FCttTtt11B.1.1.3260.001761
ORF1ab/nsp13176L176FCttTtt11B.1.1.4060.006494
ORF1ab/nsp13176L176FCttTtt11B.1.1.4260.035714
ORF1ab/nsp13176L176FCttTtt11B.1.177.160.000664
ORF1ab/nsp13176L176FCttTtt11B.1.177.620.001192
ORF1ab/nsp13176L176FCttTtt11B.1.177.810.000189
ORF1ab/nsp13176L176FCttTtt11B.1.2100.002132
ORF1ab/nsp13176L176FCttTtt11B.1.2340.000132
ORF1ab/nsp13176L176FCttTtt11B.1.2410.000812
ORF1ab/nsp13176L176FCttTtt11B.1.3110.000275
ORF1ab/nsp13176L176FCttTtt11B.1.3210.034483
ORF1ab/nsp13176L176FCttTtt11B.1.36.160.001425
ORF1ab/nsp13176L176FCttTtt11B.1.36.380.001642
ORF1ab/nsp13176L176FCttTtt11B.1.3950.007042
ORF1ab/nsp13176L176FCttTtt11B.1.4280.00102
ORF1ab/nsp13176L176FCttTtt11B.1.4290.000024
ORF1ab/nsp13176L176FCttTtt11B.1.4410.009615
ORF1ab/nsp13176L176FCttTtt11B.1.4480.002625
ORF1ab/nsp13176L176FCttTtt11B.1.5250.000113
ORF1ab/nsp13176L176FCttTtt11B.1.5680.001111
ORF1ab/nsp13176L176FCttTtt11B.1.5800.004065
ORF1ab/nsp13176L176FCttTtt11B.40.002208
ORF1ab/nsp13176L176FCttTtt11B.400.000364
ORF1ab/nsp13176L176FCttTtt11B.60.00091
ORF1ab/nsp13176L176FCttTtt11P.1.170.000162
ORF1ab/nsp13176L176FCttTtt11P.1.70.000319
ORF1ab/nsp13176L176FCttTtt11Q.10.000126
ORF1ab/nsp13176L176FCttTtt11Q.30.000145
ORF1ab/nsp13176L176FCttTtt11Q.80.000165
ORF1ab/nsp13176L176FCttTtt11R.10.00009