CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = H164del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13164H164delH5488deldelCAT---7979116726-16728

Details of the mutation H164del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13164H164delCAT---7979All0.000015
ORF1ab/nsp13164H164delCAT---4949B.1.1.70.000044
ORF1ab/nsp13164H164delCAT---880.444444
ORF1ab/nsp13164H164delCAT---33B.1.1770.00004
ORF1ab/nsp13164H164delCAT---22AD.20.000438
ORF1ab/nsp13164H164delCAT---11AY.1200.000037
ORF1ab/nsp13164H164delCAT---11AY.240.000431
ORF1ab/nsp13164H164delCAT---11AY.250.000006
ORF1ab/nsp13164H164delCAT---11AY.4.50.000107
ORF1ab/nsp13164H164delCAT---11AY.430.000004
ORF1ab/nsp13164H164delCAT---11AY.46.20.000635
ORF1ab/nsp13164H164delCAT---11AY.99.10.001553
ORF1ab/nsp13164H164delCAT---11AZ.20.000821
ORF1ab/nsp13164H164delCAT---11B.1.1.3150.008475
ORF1ab/nsp13164H164delCAT---11B.1.177.170.000821
ORF1ab/nsp13164H164delCAT---11B.1.177.730.000566
ORF1ab/nsp13164H164delCAT---11B.1.177.830.001481
ORF1ab/nsp13164H164delCAT---11B.1.2420.018868
ORF1ab/nsp13164H164delCAT---11B.1.2580.000067
ORF1ab/nsp13164H164delCAT---11B.1.617.20.000004
ORF1ab/nsp13164H164delCAT---11B.1.621.10.000506
ORF1ab/nsp13164H164delCAT---11Q.80.000165