CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = G439R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13439G439RG5763RnonsynGgaAga12173121680.99958917551-17553
ORF1ab/nsp13439G439RG5763RnonsynGgaCga1217350.00041074517551-17553

Details of the mutation G439R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13439G439RGgaAga1216812173All0.002327
ORF1ab/nsp13439G439RGgaCga512173All0.000001
ORF1ab/nsp13439G439RGgaAga1108711087R.10.99793
ORF1ab/nsp13439G439RGgaAga275275B.1.10.004989
ORF1ab/nsp13439G439RGgaAga258258B.1.2580.017169
ORF1ab/nsp13439G439RGgaAga101101B.1.1.2200.187732
ORF1ab/nsp13439G439RGgaAga8181B.10.000742
ORF1ab/nsp13439G439RGgaAga5354AY.1030.000329
ORF1ab/nsp13439G439RGgaCga154AY.1030.000006
ORF1ab/nsp13439G439RGgaAga5152B.1.1.70.000046
ORF1ab/nsp13439G439RGgaCga152B.1.1.70.000001
ORF1ab/nsp13439G439RGgaAga3434B.1.1.5250.185792
ORF1ab/nsp13439G439RGgaAga2728B.1.1600.000842
ORF1ab/nsp13439G439RGgaCga128B.1.1600.000031
ORF1ab/nsp13439G439RGgaAga1818B.1.617.20.000068
ORF1ab/nsp13439G439RGgaAga1717B.1.1.3170.006999
ORF1ab/nsp13439G439RGgaAga1313B.1.4160.016497
ORF1ab/nsp13439G439RGgaAga1212B.1.1.100.013378
ORF1ab/nsp13439G439RGgaAga1111AY.40.000017
ORF1ab/nsp13439G439RGgaAga1010B.1.20.000088
ORF1ab/nsp13439G439RGgaAga77AY.30.00007
ORF1ab/nsp13439G439RGgaAga77B.1.9.50.039773
ORF1ab/nsp13439G439RGgaAga66AY.440.000037
ORF1ab/nsp13439G439RGgaAga55AY.430.000022
ORF1ab/nsp13439G439RGgaAga55B.1.1.2220.00102
ORF1ab/nsp13439G439RGgaAga44AY.250.000024
ORF1ab/nsp13439G439RGgaAga44B.1.1770.000053
ORF1ab/nsp13439G439RGgaAga44B.1.177.320.005398
ORF1ab/nsp13439G439RGgaAga33AY.420.000121
ORF1ab/nsp13439G439RGgaAga33B.1.1.390.001529
ORF1ab/nsp13439G439RGgaAga33B.1.1.5210.016043
ORF1ab/nsp13439G439RGgaAga33B.1.6210.000266
ORF1ab/nsp13439G439RGgaAga22AY.1020.000053
ORF1ab/nsp13439G439RGgaAga22AY.390.000049
ORF1ab/nsp13439G439RGgaAga22AY.610.00021
ORF1ab/nsp13439G439RGgaAga22B.1.1.2140.000111
ORF1ab/nsp13439G439RGgaAga22B.1.1.2910.001485
ORF1ab/nsp13439G439RGgaAga22B.1.1.510.003436
ORF1ab/nsp13439G439RGgaAga22B.1.1.830.00542
ORF1ab/nsp13439G439RGgaAga22B.1.4290.000047
ORF1ab/nsp13439G439RGgaAga22B.1.6310.006734
ORF1ab/nsp13439G439RGgaAga22P.10.000032
ORF1ab/nsp13439G439RGgaAga11A0.000387
ORF1ab/nsp13439G439RGgaAga11A.23.10.000704
ORF1ab/nsp13439G439RGgaAga11A.280.002646
ORF1ab/nsp13439G439RGgaAga11AY.1200.000037
ORF1ab/nsp13439G439RGgaAga11AY.160.00038
ORF1ab/nsp13439G439RGgaAga11AY.180.010101
ORF1ab/nsp13439G439RGgaAga11AY.230.00007
ORF1ab/nsp13439G439RGgaAga11AY.380.000499
ORF1ab/nsp13439G439RGgaAga11AY.490.003195
ORF1ab/nsp13439G439RGgaAga11AY.540.000095
ORF1ab/nsp13439G439RGgaAga11AY.60.000041
ORF1ab/nsp13439G439RGgaAga11AY.980.000079
ORF1ab/nsp13439G439RGgaAga11B.1.1.1250.010204
ORF1ab/nsp13439G439RGgaAga11B.1.1.1960.005714
ORF1ab/nsp13439G439RGgaAga11B.1.1.1980.001468
ORF1ab/nsp13439G439RGgaAga11B.1.1.2360.006897
ORF1ab/nsp13439G439RGgaAga11B.1.1.2630.001558
ORF1ab/nsp13439G439RGgaAga11B.1.1.3050.003861
ORF1ab/nsp13439G439RGgaAga11B.1.1.3260.001761
ORF1ab/nsp13439G439RGgaAga11B.1.1.330.000421
ORF1ab/nsp13439G439RGgaAga11B.1.1.370.000193
ORF1ab/nsp13439G439RGgaAga11B.1.1.4640.001473
ORF1ab/nsp13439G439RGgaAga11B.1.1.5190.00004
ORF1ab/nsp13439G439RGgaAga11B.1.1.5220.017241
ORF1ab/nsp13439G439RGgaAga11B.1.1.80.003584
ORF1ab/nsp13439G439RGgaAga11B.1.1610.017241
ORF1ab/nsp13439G439RGgaAga11B.1.177.440.000519
ORF1ab/nsp13439G439RGgaAga11B.1.177.750.001041
ORF1ab/nsp13439G439RGgaAga11B.1.177.840.006667
ORF1ab/nsp13439G439RGgaAga11B.1.214.20.0006
ORF1ab/nsp13439G439RGgaAga11B.1.2430.00007
ORF1ab/nsp13439G439RGgaAga11B.1.258.210.007752
ORF1ab/nsp13439G439RGgaAga11B.1.2650.001271
ORF1ab/nsp13439G439RGgaAga11B.1.2770.02381
ORF1ab/nsp13439G439RGgaAga11B.1.4270.00005
ORF1ab/nsp13439G439RGgaAga11B.1.4660.023256
ORF1ab/nsp13439G439RGgaAga11B.1.4680.005714
ORF1ab/nsp13439G439RGgaAga11B.1.5330.009615
ORF1ab/nsp13439G439RGgaAga11B.1.5810.009434
ORF1ab/nsp13439G439RGgaCga11B.1.5980.016949
ORF1ab/nsp13439G439RGgaAga11B.1.617.10.000129
ORF1ab/nsp13439G439RGgaAga11B.1.6280.000352
ORF1ab/nsp13439G439RGgaAga11B.1.930.000934
ORF1ab/nsp13439G439RGgaAga11B.400.000364
ORF1ab/nsp13439G439RGgaCga11D.20.000075
ORF1ab/nsp13439G439RGgaAga11P.1.120.000484
ORF1ab/nsp13439G439RGgaAga11P.1.140.000048
ORF1ab/nsp13439G439RGgaAga11Q.10.000126