CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = G206V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13206G206VG5530VnonsyngGtgTt27172717116852-16854

Details of the mutation G206V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13206G206VgGtgTt27172717All0.00052
ORF1ab/nsp13206G206VgGtgTt516516AY.40.000803
ORF1ab/nsp13206G206VgGtgTt513513B.1.1.70.000459
ORF1ab/nsp13206G206VgGtgTt143143B.1.1.5280.6875
ORF1ab/nsp13206G206VgGtgTt124124B.1.617.20.000467
ORF1ab/nsp13206G206VgGtgTt7373AY.430.000323
ORF1ab/nsp13206G206VgGtgTt7373B.1.1.340.960526
ORF1ab/nsp13206G206VgGtgTt6666AY.200.002565
ORF1ab/nsp13206G206VgGtgTt5757B.1.1600.001778
ORF1ab/nsp13206G206VgGtgTt5656C.350.043344
ORF1ab/nsp13206G206VgGtgTt5353AY.4.20.00115
ORF1ab/nsp13206G206VgGtgTt5151B.1.1770.000672
ORF1ab/nsp13206G206VgGtgTt5050B.10.000458
ORF1ab/nsp13206G206VgGtgTt4545B.1.20.000396
ORF1ab/nsp13206G206VgGtgTt4242AY.1030.000261
ORF1ab/nsp13206G206VgGtgTt3939B.1.10.000707
ORF1ab/nsp13206G206VgGtgTt3939B.1.1260.049745
ORF1ab/nsp13206G206VgGtgTt3838P.10.000599
ORF1ab/nsp13206G206VgGtgTt3434B.1.177.210.0026
ORF1ab/nsp13206G206VgGtgTt3333AY.390.000815
ORF1ab/nsp13206G206VgGtgTt3333B.1.177.860.006054
ORF1ab/nsp13206G206VgGtgTt3030AY.1020.000795
ORF1ab/nsp13206G206VgGtgTt2828B.1.1.3821
ORF1ab/nsp13206G206VgGtgTt2828B.1.177.810.005301
ORF1ab/nsp13206G206VgGtgTt2727AY.250.000162
ORF1ab/nsp13206G206VgGtgTt2424AY.440.000146
ORF1ab/nsp13206G206VgGtgTt2424B.1.5260.000564
ORF1ab/nsp13206G206VgGtgTt2121B.1.2400.004527
ORF1ab/nsp13206G206VgGtgTt1919AY.290.0003
ORF1ab/nsp13206G206VgGtgTt1818AY.50.000372
ORF1ab/nsp13206G206VgGtgTt1818AY.520.014658
ORF1ab/nsp13206G206VgGtgTt1818B.1.258.170.001871
ORF1ab/nsp13206G206VgGtgTt1717B.1.2580.001131
ORF1ab/nsp13206G206VgGtgTt1616B.1.3510.000476
ORF1ab/nsp13206G206VgGtgTt1515AY.260.000425
ORF1ab/nsp13206G206VgGtgTt1515AY.30.000149
ORF1ab/nsp13206G206VgGtgTt1515B.1.2430.001044
ORF1ab/nsp13206G206VgGtgTt1414B.1.1.5190.000556
ORF1ab/nsp13206G206VgGtgTt1313AY.1130.001851
ORF1ab/nsp13206G206VgGtgTt1212AY.9.20.000441
ORF1ab/nsp13206G206VgGtgTt99AY.1170.000761
ORF1ab/nsp13206G206VgGtgTt88AY.99.20.000737
ORF1ab/nsp13206G206VgGtgTt77B.1.1.2160.006233
ORF1ab/nsp13206G206VgGtgTt77B.1.4270.000353
ORF1ab/nsp13206G206VgGtgTt77B.1.6180.028226
ORF1ab/nsp13206G206VgGtgTt77P.20.001306
ORF1ab/nsp13206G206VgGtgTt66AY.1200.000223
ORF1ab/nsp13206G206VgGtgTt66AY.350.001398
ORF1ab/nsp13206G206VgGtgTt66AY.75.10.001082
ORF1ab/nsp13206G206VgGtgTt66AY.9.10.000502
ORF1ab/nsp13206G206VgGtgTt66B0.000767
ORF1ab/nsp13206G206VgGtgTt66B.1.177.430.008863
ORF1ab/nsp13206G206VgGtgTt66B.1.177.450.002287
ORF1ab/nsp13206G206VgGtgTt66B.1.4040.007812
ORF1ab/nsp13206G206VgGtgTt66B.1.4160.007614
ORF1ab/nsp13206G206VgGtgTt66B.1.5960.000523
ORF1ab/nsp13206G206VgGtgTt55AY.300.001979
ORF1ab/nsp13206G206VgGtgTt55AY.470.000156
ORF1ab/nsp13206G206VgGtgTt55AY.610.000524
ORF1ab/nsp13206G206VgGtgTt55B.1.4290.000118
ORF1ab/nsp13206G206VgGtgTt44AY.420.000161
ORF1ab/nsp13206G206VgGtgTt44AY.750.000224
ORF1ab/nsp13206G206VgGtgTt44B.1.1.2140.000222
ORF1ab/nsp13206G206VgGtgTt33AY.1090.002219
ORF1ab/nsp13206G206VgGtgTt33AY.1110.000549
ORF1ab/nsp13206G206VgGtgTt33AY.230.000209
ORF1ab/nsp13206G206VgGtgTt33AY.3.10.000256
ORF1ab/nsp13206G206VgGtgTt33AY.330.0002
ORF1ab/nsp13206G206VgGtgTt33AY.4.30.002525
ORF1ab/nsp13206G206VgGtgTt33AY.60.000123
ORF1ab/nsp13206G206VgGtgTt33B.1.1.2220.000612
ORF1ab/nsp13206G206VgGtgTt33B.1.1.280.000934
ORF1ab/nsp13206G206VgGtgTt33B.1.6370.000219
ORF1ab/nsp13206G206VgGtgTt33C.36.30.001702
ORF1ab/nsp13206G206VgGtgTt22A0.000774
ORF1ab/nsp13206G206VgGtgTt22A.110.117647
ORF1ab/nsp13206G206VgGtgTt22A.210.00554
ORF1ab/nsp13206G206VgGtgTt22AY.1190.000071
ORF1ab/nsp13206G206VgGtgTt22AY.340.000194
ORF1ab/nsp13206G206VgGtgTt22AY.600.001876
ORF1ab/nsp13206G206VgGtgTt22AY.90.000135
ORF1ab/nsp13206G206VgGtgTt22AY.98.10.000097
ORF1ab/nsp13206G206VgGtgTt22B.1.1.370.000386
ORF1ab/nsp13206G206VgGtgTt22B.1.1.4340.000697
ORF1ab/nsp13206G206VgGtgTt22B.1.1.500.001358
ORF1ab/nsp13206G206VgGtgTt22B.1.1.630.000772
ORF1ab/nsp13206G206VgGtgTt22B.1.1270.004396
ORF1ab/nsp13206G206VgGtgTt22B.1.177.330.003289
ORF1ab/nsp13206G206VgGtgTt22B.1.360.000292
ORF1ab/nsp13206G206VgGtgTt22B.1.3910.002255
ORF1ab/nsp13206G206VgGtgTt22B.1.4530.006472
ORF1ab/nsp13206G206VgGtgTt22B.1.6210.000177
ORF1ab/nsp13206G206VgGtgTt22L.30.007092
ORF1ab/nsp13206G206VgGtgTt22P.1.10.000635
ORF1ab/nsp13206G206VgGtgTt22P.1.170.000324
ORF1ab/nsp13206G206VgGtgTt22R.10.00018
ORF1ab/nsp13206G206VgGtgTt11A.2.50.000499
ORF1ab/nsp13206G206VgGtgTt11A.50.001923
ORF1ab/nsp13206G206VgGtgTt11AY.1160.000287
ORF1ab/nsp13206G206VgGtgTt11AY.120.000316
ORF1ab/nsp13206G206VgGtgTt11AY.120.2.10.000498
ORF1ab/nsp13206G206VgGtgTt11AY.1210.000135
ORF1ab/nsp13206G206VgGtgTt11AY.140.000088
ORF1ab/nsp13206G206VgGtgTt11AY.320.000532
ORF1ab/nsp13206G206VgGtgTt11AY.34.10.00051
ORF1ab/nsp13206G206VgGtgTt11AY.370.000316
ORF1ab/nsp13206G206VgGtgTt11AY.380.000499
ORF1ab/nsp13206G206VgGtgTt11AY.39.10.00004
ORF1ab/nsp13206G206VgGtgTt11AY.4.40.000409
ORF1ab/nsp13206G206VgGtgTt11AY.400.000964
ORF1ab/nsp13206G206VgGtgTt11AY.410.000294
ORF1ab/nsp13206G206VgGtgTt11AY.450.000122
ORF1ab/nsp13206G206VgGtgTt11AY.460.000104
ORF1ab/nsp13206G206VgGtgTt11AY.46.20.000635
ORF1ab/nsp13206G206VgGtgTt11AY.46.40.000165
ORF1ab/nsp13206G206VgGtgTt11AY.590.00053
ORF1ab/nsp13206G206VgGtgTt11AY.620.000436
ORF1ab/nsp13206G206VgGtgTt11AY.630.000387
ORF1ab/nsp13206G206VgGtgTt11AY.690.000187
ORF1ab/nsp13206G206VgGtgTt11AY.7.10.000113
ORF1ab/nsp13206G206VgGtgTt11AY.780.001541
ORF1ab/nsp13206G206VgGtgTt11AY.840.000437
ORF1ab/nsp13206G206VgGtgTt11AY.910.00073
ORF1ab/nsp13206G206VgGtgTt11AY.980.000079
ORF1ab/nsp13206G206VgGtgTt11AY.990.001049
ORF1ab/nsp13206G206VgGtgTt11B.1.1.10.000327
ORF1ab/nsp13206G206VgGtgTt11B.1.1.2850.006536
ORF1ab/nsp13206G206VgGtgTt11B.1.1.2890.002083
ORF1ab/nsp13206G206VgGtgTt11B.1.1.3060.000438
ORF1ab/nsp13206G206VgGtgTt11B.1.1.3260.001761
ORF1ab/nsp13206G206VgGtgTt11B.1.1.4480.002033
ORF1ab/nsp13206G206VgGtgTt11B.1.1280.000635
ORF1ab/nsp13206G206VgGtgTt11B.1.177.360.016129
ORF1ab/nsp13206G206VgGtgTt11B.1.177.500.004695
ORF1ab/nsp13206G206VgGtgTt11B.1.177.750.001041
ORF1ab/nsp13206G206VgGtgTt11B.1.177.80.000752
ORF1ab/nsp13206G206VgGtgTt11B.1.1810.019608
ORF1ab/nsp13206G206VgGtgTt11B.1.2060.000816
ORF1ab/nsp13206G206VgGtgTt11B.1.2190.009434
ORF1ab/nsp13206G206VgGtgTt11B.1.2360.002053
ORF1ab/nsp13206G206VgGtgTt11B.1.3190.003049
ORF1ab/nsp13206G206VgGtgTt11B.1.3490.000715
ORF1ab/nsp13206G206VgGtgTt11B.1.4650.003802
ORF1ab/nsp13206G206VgGtgTt11B.1.4970.000315
ORF1ab/nsp13206G206VgGtgTt11B.1.596.10.009346
ORF1ab/nsp13206G206VgGtgTt11B.1.619.10.000641
ORF1ab/nsp13206G206VgGtgTt11B.400.000364
ORF1ab/nsp13206G206VgGtgTt11P.1.140.000048
ORF1ab/nsp13206G206VgGtgTt11P.1.70.000319

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.