CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = E420del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13420E420del1E5744del1delGaa-aa630.517494-17496
ORF1ab/nsp13420E420del1E5744del1delgAag-a620.33333317494-17496
ORF1ab/nsp13420E420del1E5744del1delgaAga-610.16666717494-17496

Details of the mutation E420del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13420E420del1Gaa-aa36All0.000001
ORF1ab/nsp13420E420del1gAag-a26All0
ORF1ab/nsp13420E420del1gaAga-16All0
ORF1ab/nsp13420E420del1gAag-a11AY.260.000028
ORF1ab/nsp13420E420del1gAag-a11B0.000128
ORF1ab/nsp13420E420del1Gaa-aa11B.10.000009
ORF1ab/nsp13420E420del1gaAga-11B.1.20.000009
ORF1ab/nsp13420E420del1Gaa-aa11B.1.2640.012346
ORF1ab/nsp13420E420del1Gaa-aa11D.20.000075