CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = E341D

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13341E341DE5665DnonsyngaGgaT1245541245060.99961517257-17259
ORF1ab/nsp13341E341DE5665DnonsyngaGgaC124554480.00038537517257-17259

Details of the mutation E341D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13341E341DgaGgaT124506124554All0.023813
ORF1ab/nsp13341E341DgaGgaC48124554All0.000009
ORF1ab/nsp13341E341DgaGgaT6257862579P.10.985853
ORF1ab/nsp13341E341DgaGgaC162579P.10.000016
ORF1ab/nsp13341E341DgaGgaT2089320893P.1.140.998709
ORF1ab/nsp13341E341DgaGgaT61676167P.1.170.997574
ORF1ab/nsp13341E341DgaGgaT42834283P.1.150.995121
ORF1ab/nsp13341E341DgaGgaT37043704P.1.100.998114
ORF1ab/nsp13341E341DgaGgaT31193119P.1.70.995849
ORF1ab/nsp13341E341DgaGgaT30533053P.1.10.969822
ORF1ab/nsp13341E341DgaGgaT27762776AY.430.012299
ORF1ab/nsp13341E341DgaGgaT26242624P.1.160.981669
ORF1ab/nsp13341E341DgaGgaT20192019AY.40.003142
ORF1ab/nsp13341E341DgaGgaT19591959P.1.120.948209
ORF1ab/nsp13341E341DgaGgaT11421142P.1.17.10.999125
ORF1ab/nsp13341E341DgaGgaT11011101P.1.130.989218
ORF1ab/nsp13341E341DgaGgaT10241024P.1.41
ORF1ab/nsp13341E341DgaGgaT982982B.1.3750.804918
ORF1ab/nsp13341E341DgaGgaT864864P.1.20.998844
ORF1ab/nsp13341E341DgaGgaT514514P.1.61
ORF1ab/nsp13341E341DgaGgaT429430AY.440.002611
ORF1ab/nsp13341E341DgaGgaC1430AY.440.000006
ORF1ab/nsp13341E341DgaGgaT398412B.1.617.20.001499
ORF1ab/nsp13341E341DgaGgaC14412B.1.617.20.000053
ORF1ab/nsp13341E341DgaGgaT372372AY.250.002238
ORF1ab/nsp13341E341DgaGgaT362363AY.1030.002248
ORF1ab/nsp13341E341DgaGgaC1363AY.1030.000006
ORF1ab/nsp13341E341DgaGgaT363363B.1.1.70.000325
ORF1ab/nsp13341E341DgaGgaT294295AY.30.002924
ORF1ab/nsp13341E341DgaGgaC1295AY.30.00001
ORF1ab/nsp13341E341DgaGgaT246246B.10.002253
ORF1ab/nsp13341E341DgaGgaT209209P.1.81
ORF1ab/nsp13341E341DgaGgaT208208P.1.91
ORF1ab/nsp13341E341DgaGgaT190190B.1.1.2720.989583
ORF1ab/nsp13341E341DgaGgaT169169AY.1020.004481
ORF1ab/nsp13341E341DgaGgaT163163B.1.10.002957
ORF1ab/nsp13341E341DgaGgaT138138B.1.177.860.025316
ORF1ab/nsp13341E341DgaGgaT134134B.1.20.00118
ORF1ab/nsp13341E341DgaGgaT116116P.1.10.10.943089
ORF1ab/nsp13341E341DgaGgaT9898P.1.111
ORF1ab/nsp13341E341DgaGgaT7070B.1.36.380.114943
ORF1ab/nsp13341E341DgaGgaT6767AY.1190.002366
ORF1ab/nsp13341E341DgaGgaT6464AY.200.002487
ORF1ab/nsp13341E341DgaGgaT5464AY.390.001334
ORF1ab/nsp13341E341DgaGgaC1064AY.390.000247
ORF1ab/nsp13341E341DgaGgaT5858B.1.1.2090.517857
ORF1ab/nsp13341E341DgaGgaT5454AY.98.10.002615
ORF1ab/nsp13341E341DgaGgaT5151B.1.596.10.476636
ORF1ab/nsp13341E341DgaGgaT4545AY.470.0014
ORF1ab/nsp13341E341DgaGgaT4444B.1.177.750.045786
ORF1ab/nsp13341E341DgaGgaT4343AY.750.002409
ORF1ab/nsp13341E341DgaGgaT4242B.1.177.730.023783
ORF1ab/nsp13341E341DgaGgaT4141B.1.1770.00054
ORF1ab/nsp13341E341DgaGgaT3939B.1.360.00569
ORF1ab/nsp13341E341DgaGgaT3434AY.50.000702
ORF1ab/nsp13341E341DgaGgaT3232C.370.003714
ORF1ab/nsp13341E341DgaGgaT3131AY.1180.001942
ORF1ab/nsp13341E341DgaGgaT3131B.1.5260.000729
ORF1ab/nsp13341E341DgaGgaT2929P.1.31
ORF1ab/nsp13341E341DgaGgaT2828AY.290.000442
ORF1ab/nsp13341E341DgaGgaT2828AY.420.001126
ORF1ab/nsp13341E341DgaGgaT2727AY.39.10.00107
ORF1ab/nsp13341E341DgaGgaT2525AY.260.000708
ORF1ab/nsp13341E341DgaGgaT2424P.1.10.21
ORF1ab/nsp13341E341DgaGgaT2121B.1.5950.00548
ORF1ab/nsp13341E341DgaGgaT1818AY.1060.006028
ORF1ab/nsp13341E341DgaGgaT1818B.1.177.70.002967
ORF1ab/nsp13341E341DgaGgaT1717B.1.1.5280.081731
ORF1ab/nsp13341E341DgaGgaT1717B.1.2210.001208
ORF1ab/nsp13341E341DgaGgaT1616AY.1000.000736
ORF1ab/nsp13341E341DgaGgaT1616AY.450.001947
ORF1ab/nsp13341E341DgaGgaT1515AY.3.10.001279
ORF1ab/nsp13341E341DgaGgaT1515AY.330.001002
ORF1ab/nsp13341E341DgaGgaT1515B.1.5600.069444
ORF1ab/nsp13341E341DgaGgaT1415B.1.617.10.001806
ORF1ab/nsp13341E341DgaGgaC115B.1.617.10.000129
ORF1ab/nsp13341E341DgaGgaT1414AY.610.001467
ORF1ab/nsp13341E341DgaGgaT1414AY.9.20.000514
ORF1ab/nsp13341E341DgaGgaT1313AY.460.001353
ORF1ab/nsp13341E341DgaGgaT1313B.1.1.3170.005352
ORF1ab/nsp13341E341DgaGgaT1313P.1.51
ORF1ab/nsp13341E341DgaGgaT1212A.2.50.005988
ORF1ab/nsp13341E341DgaGgaT1212AY.4.50.00129
ORF1ab/nsp13341E341DgaGgaT1212B.1.1.5190.000477
ORF1ab/nsp13341E341DgaGgaT1212B.1.2580.000799
ORF1ab/nsp13341E341DgaGgaT1111AY.4.20.000239
ORF1ab/nsp13341E341DgaGgaT1111AY.920.00316
ORF1ab/nsp13341E341DgaGgaT1111B.1.3510.000327
ORF1ab/nsp13341E341DgaGgaT910AY.1130.001282
ORF1ab/nsp13341E341DgaGgaC110AY.1130.000142
ORF1ab/nsp13341E341DgaGgaT1010AY.1140.002311
ORF1ab/nsp13341E341DgaGgaT1010B.1.2430.000696
ORF1ab/nsp13341E341DgaGgaT99B.1.214.20.005396
ORF1ab/nsp13341E341DgaGgaT99C.37.10.02356
ORF1ab/nsp13341E341DgaGgaT88AY.46.60.000578
ORF1ab/nsp13341E341DgaGgaT78AY.620.00305
ORF1ab/nsp13341E341DgaGgaC18AY.620.000436
ORF1ab/nsp13341E341DgaGgaT88B.1.1.2530.02005
ORF1ab/nsp13341E341DgaGgaC88B.1.1.2550.024242
ORF1ab/nsp13341E341DgaGgaT88B.1.1.280.00249
ORF1ab/nsp13341E341DgaGgaT88B.1.1.3720.00551
ORF1ab/nsp13341E341DgaGgaT88B.1.2340.001056
ORF1ab/nsp13341E341DgaGgaT77AY.1210.000947
ORF1ab/nsp13341E341DgaGgaT77AY.160.002658
ORF1ab/nsp13341E341DgaGgaT77AY.20.002493
ORF1ab/nsp13341E341DgaGgaC47AY.340.000388
ORF1ab/nsp13341E341DgaGgaT37AY.340.000291
ORF1ab/nsp13341E341DgaGgaT77AY.980.000553
ORF1ab/nsp13341E341DgaGgaT77B.1.1.1610.024735
ORF1ab/nsp13341E341DgaGgaT77B.1.4290.000165
ORF1ab/nsp13341E341DgaGgaT77B.1.5820.003435
ORF1ab/nsp13341E341DgaGgaT77B.1.5960.00061
ORF1ab/nsp13341E341DgaGgaT66AY.1170.000507
ORF1ab/nsp13341E341DgaGgaT66AY.140.000528
ORF1ab/nsp13341E341DgaGgaT66AY.360.000889
ORF1ab/nsp13341E341DgaGgaT66B0.000767
ORF1ab/nsp13341E341DgaGgaT66B.1.1.630.002315
ORF1ab/nsp13341E341DgaGgaT66B.1.258.170.000624
ORF1ab/nsp13341E341DgaGgaT66B.1.6210.000531
ORF1ab/nsp13341E341DgaGgaT55AY.1200.000186
ORF1ab/nsp13341E341DgaGgaT55AY.60.000206
ORF1ab/nsp13341E341DgaGgaT55AY.640.002976
ORF1ab/nsp13341E341DgaGgaT55AY.75.10.000902
ORF1ab/nsp13341E341DgaGgaT55AY.99.20.000461
ORF1ab/nsp13341E341DgaGgaT55B.1.1.2750.05618
ORF1ab/nsp13341E341DgaGgaT55B.1.1.3180.001509
ORF1ab/nsp13341E341DgaGgaT55B.1.177.80.003762
ORF1ab/nsp13341E341DgaGgaT55B.1.258.110.001982
ORF1ab/nsp13341E341DgaGgaT55B.1.3670.003962
ORF1ab/nsp13341E341DgaGgaT55B.1.9.50.028409
ORF1ab/nsp13341E341DgaGgaT55P.20.000933
ORF1ab/nsp13341E341DgaGgaT55Q.80.000825
ORF1ab/nsp13341E341DgaGgaT44A0.001548
ORF1ab/nsp13341E341DgaGgaT44AY.1160.001147
ORF1ab/nsp13341E341DgaGgaC24AY.16.10.00094
ORF1ab/nsp13341E341DgaGgaT24AY.16.10.00094
ORF1ab/nsp13341E341DgaGgaT44AY.320.00213
ORF1ab/nsp13341E341DgaGgaT44AY.46.40.000658
ORF1ab/nsp13341E341DgaGgaT44AY.860.00332
ORF1ab/nsp13341E341DgaGgaT44B.1.1.10.001307
ORF1ab/nsp13341E341DgaGgaT34B.1.1.2220.000612
ORF1ab/nsp13341E341DgaGgaC14B.1.1.2220.000204
ORF1ab/nsp13341E341DgaGgaT44B.1.1.4320.005063
ORF1ab/nsp13341E341DgaGgaT44B.1.1600.000125
ORF1ab/nsp13341E341DgaGgaT44B.1.2320.002149
ORF1ab/nsp13341E341DgaGgaT44B.1.351.20.00121
ORF1ab/nsp13341E341DgaGgaT34B.1.36.290.001552
ORF1ab/nsp13341E341DgaGgaC14B.1.36.290.000517
ORF1ab/nsp13341E341DgaGgaT44B.1.910.008299
ORF1ab/nsp13341E341DgaGgaT44C.36.10.016598
ORF1ab/nsp13341E341DgaGgaT33AY.230.000209
ORF1ab/nsp13341E341DgaGgaT33AY.5.40.00083
ORF1ab/nsp13341E341DgaGgaT33AY.540.000286
ORF1ab/nsp13341E341DgaGgaT33AY.670.001393
ORF1ab/nsp13341E341DgaGgaT33AY.90.000203
ORF1ab/nsp13341E341DgaGgaT33AY.9.10.000251
ORF1ab/nsp13341E341DgaGgaT33B.1.1.3060.001315
ORF1ab/nsp13341E341DgaGgaT33B.1.1.3260.005282
ORF1ab/nsp13341E341DgaGgaT33B.1.1.3980.009677
ORF1ab/nsp13341E341DgaGgaT33B.1.3240.004815
ORF1ab/nsp13341E341DgaGgaT33B.1.466.20.001174
ORF1ab/nsp13341E341DgaGgaT33B.1.5750.00091
ORF1ab/nsp13341E341DgaGgaT33B.1.6180.012097
ORF1ab/nsp13341E341DgaGgaT33B.400.001093
ORF1ab/nsp13341E341DgaGgaT22A.290.010638
ORF1ab/nsp13341E341DgaGgaT22AY.1040.003968
ORF1ab/nsp13341E341DgaGgaT22AY.1050.001286
ORF1ab/nsp13341E341DgaGgaT22AY.1100.000225
ORF1ab/nsp13341E341DgaGgaT22AY.120.000632
ORF1ab/nsp13341E341DgaGgaT22AY.130.000322
ORF1ab/nsp13341E341DgaGgaT22AY.4.2.10.000298
ORF1ab/nsp13341E341DgaGgaT22AY.4.30.001684
ORF1ab/nsp13341E341DgaGgaT22AY.46.10.002053
ORF1ab/nsp13341E341DgaGgaT22AY.46.20.001271
ORF1ab/nsp13341E341DgaGgaT22AY.520.001629
ORF1ab/nsp13341E341DgaGgaT22AY.600.001876
ORF1ab/nsp13341E341DgaGgaT22AY.650.001066
ORF1ab/nsp13341E341DgaGgaT22AY.7.10.000225
ORF1ab/nsp13341E341DgaGgaT22AY.710.00095
ORF1ab/nsp13341E341DgaGgaT22AY.990.002099
ORF1ab/nsp13341E341DgaGgaT22AZ.20.001642
ORF1ab/nsp13341E341DgaGgaT22B.1.1.100.00223
ORF1ab/nsp13341E341DgaGgaT22B.1.1.2140.000111
ORF1ab/nsp13341E341DgaGgaT22B.1.1.2160.001781
ORF1ab/nsp13341E341DgaGgaT22B.1.1.250.001137
ORF1ab/nsp13341E341DgaGgaT22B.1.1.3970.004505
ORF1ab/nsp13341E341DgaGgaT22B.1.1.4090.005666
ORF1ab/nsp13341E341DgaGgaT22B.1.1.4170.005405
ORF1ab/nsp13341E341DgaGgaT22B.1.1.5070.017391
ORF1ab/nsp13341E341DgaGgaT22B.1.1.580.010753
ORF1ab/nsp13341E341DgaGgaT22B.1.1590.02439
ORF1ab/nsp13341E341DgaGgaT22B.1.177.440.001038
ORF1ab/nsp13341E341DgaGgaT22B.1.177.530.004785
ORF1ab/nsp13341E341DgaGgaT22B.1.177.570.000562
ORF1ab/nsp13341E341DgaGgaT22B.1.2230.005556
ORF1ab/nsp13341E341DgaGgaT22B.1.3110.000549
ORF1ab/nsp13341E341DgaGgaT22B.1.3490.00143
ORF1ab/nsp13341E341DgaGgaT22B.1.4270.000101
ORF1ab/nsp13341E341DgaGgaT22B.1.6120.005305
ORF1ab/nsp13341E341DgaGgaT22B.1.621.10.001012
ORF1ab/nsp13341E341DgaGgaT22B.1.6230.001073
ORF1ab/nsp13341E341DgaGgaT22B.1.6360.013423
ORF1ab/nsp13341E341DgaGgaT22C.360.001821
ORF1ab/nsp13341E341DgaGgaT22N.50.003534
ORF1ab/nsp13341E341DgaGgaT22R.10.00018
ORF1ab/nsp13341E341DgaGgaT11A.210.00277
ORF1ab/nsp13341E341DgaGgaT11A.23.10.000704
ORF1ab/nsp13341E341DgaGgaT11AD.20.000219
ORF1ab/nsp13341E341DgaGgaT11AT.10.005128
ORF1ab/nsp13341E341DgaGgaT11AY.10.000396
ORF1ab/nsp13341E341DgaGgaT11AY.1070.000466
ORF1ab/nsp13341E341DgaGgaT11AY.1080.001103
ORF1ab/nsp13341E341DgaGgaT11AY.1090.00074
ORF1ab/nsp13341E341DgaGgaT11AY.1110.000183
ORF1ab/nsp13341E341DgaGgaT11AY.116.10.000311
ORF1ab/nsp13341E341DgaGgaT11AY.240.000431
ORF1ab/nsp13341E341DgaGgaT11AY.370.000316
ORF1ab/nsp13341E341DgaGgaT11AY.380.000499
ORF1ab/nsp13341E341DgaGgaT11AY.4.40.000409
ORF1ab/nsp13341E341DgaGgaT11AY.410.000294
ORF1ab/nsp13341E341DgaGgaT11AY.490.003195
ORF1ab/nsp13341E341DgaGgaT11AY.5.30.000337
ORF1ab/nsp13341E341DgaGgaT11AY.530.000288
ORF1ab/nsp13341E341DgaGgaT11AY.550.000917
ORF1ab/nsp13341E341DgaGgaT11AY.560.001605
ORF1ab/nsp13341E341DgaGgaT11AY.590.00053
ORF1ab/nsp13341E341DgaGgaT11AY.680.000274
ORF1ab/nsp13341E341DgaGgaT11AY.690.000187
ORF1ab/nsp13341E341DgaGgaT11AY.70.000196
ORF1ab/nsp13341E341DgaGgaT11AY.700.000209
ORF1ab/nsp13341E341DgaGgaT11AY.740.000116
ORF1ab/nsp13341E341DgaGgaT11AY.850.000427
ORF1ab/nsp13341E341DgaGgaT11AY.880.000884
ORF1ab/nsp13341E341DgaGgaT11AY.910.00073
ORF1ab/nsp13341E341DgaGgaT11AY.940.000443
ORF1ab/nsp13341E341DgaGgaT11B.1.1.120.007463
ORF1ab/nsp13341E341DgaGgaT11B.1.1.1350.004695
ORF1ab/nsp13341E341DgaGgaT11B.1.1.1410.002012
ORF1ab/nsp13341E341DgaGgaT11B.1.1.1760.000439
ORF1ab/nsp13341E341DgaGgaT11B.1.1.1980.001468
ORF1ab/nsp13341E341DgaGgaT11B.1.1.2200.001859
ORF1ab/nsp13341E341DgaGgaT11B.1.1.2360.006897
ORF1ab/nsp13341E341DgaGgaT11B.1.1.370.000193
ORF1ab/nsp13341E341DgaGgaT11B.1.1.390.00051
ORF1ab/nsp13341E341DgaGgaT11B.1.1.4620.008621
ORF1ab/nsp13341E341DgaGgaT11B.1.1.500.000679
ORF1ab/nsp13341E341DgaGgaT11B.1.1.5230.001563
ORF1ab/nsp13341E341DgaGgaT11B.1.1.540.003021
ORF1ab/nsp13341E341DgaGgaT11B.1.1260.001276
ORF1ab/nsp13341E341DgaGgaT11B.1.1700.00431
ORF1ab/nsp13341E341DgaGgaT11B.1.177.40.000211
ORF1ab/nsp13341E341DgaGgaT11B.1.177.540.000606
ORF1ab/nsp13341E341DgaGgaT11B.1.177.560.000668
ORF1ab/nsp13341E341DgaGgaT11B.1.177.60.000977
ORF1ab/nsp13341E341DgaGgaC11B.1.177.600.000218
ORF1ab/nsp13341E341DgaGgaT11B.1.177.810.000189
ORF1ab/nsp13341E341DgaGgaT11B.1.177.820.000477
ORF1ab/nsp13341E341DgaGgaT11B.1.1790.003759
ORF1ab/nsp13341E341DgaGgaT11B.1.2140.003663
ORF1ab/nsp13341E341DgaGgaT11B.1.214.30.007143
ORF1ab/nsp13341E341DgaGgaT11B.1.2360.002053
ORF1ab/nsp13341E341DgaGgaT11B.1.2390.001221
ORF1ab/nsp13341E341DgaGgaT11B.1.2400.000216
ORF1ab/nsp13341E341DgaGgaT11B.1.2410.000812
ORF1ab/nsp13341E341DgaGgaT11B.1.258.140.00098
ORF1ab/nsp13341E341DgaGgaT11B.1.2790.000514
ORF1ab/nsp13341E341DgaGgaT11B.1.3320.003497
ORF1ab/nsp13341E341DgaGgaT11B.1.36.190.009259
ORF1ab/nsp13341E341DgaGgaT11B.1.3820.008929
ORF1ab/nsp13341E341DgaGgaT11B.1.400.10.015152
ORF1ab/nsp13341E341DgaGgaT11B.1.4040.001302
ORF1ab/nsp13341E341DgaGgaT11B.1.4090.000781
ORF1ab/nsp13341E341DgaGgaT11B.1.4150.014286
ORF1ab/nsp13341E341DgaGgaT11B.1.4250.002994
ORF1ab/nsp13341E341DgaGgaT11B.1.5240.001406
ORF1ab/nsp13341E341DgaGgaT11B.1.5250.000113
ORF1ab/nsp13341E341DgaGgaT11B.1.5330.009615
ORF1ab/nsp13341E341DgaGgaT11B.1.5380.008065
ORF1ab/nsp13341E341DgaGgaT11B.1.5880.00091
ORF1ab/nsp13341E341DgaGgaT11B.1.6200.000946
ORF1ab/nsp13341E341DgaGgaT11B.1.6260.005714
ORF1ab/nsp13341E341DgaGgaT11B.1.6280.000352
ORF1ab/nsp13341E341DgaGgaT11B.1.6370.000073
ORF1ab/nsp13341E341DgaGgaT11B.1.940.027027
ORF1ab/nsp13341E341DgaGgaT11B.290.003509
ORF1ab/nsp13341E341DgaGgaT11B.30.000831
ORF1ab/nsp13341E341DgaGgaT11C.350.000774
ORF1ab/nsp13341E341DgaGgaT11C.390.018868
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