CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = E319D

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13319E319DE5643DnonsyngaGgaT11710116990.99906117191-17193
ORF1ab/nsp13319E319DE5643DnonsyngaGgaC11710110.00093936817191-17193

Details of the mutation E319D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13319E319DgaGgaT1169911710All0.002238
ORF1ab/nsp13319E319DgaGgaC1111710All0.000002
ORF1ab/nsp13319E319DgaGgaT80518051AY.40.012531
ORF1ab/nsp13319E319DgaGgaT754754B.1.6230.404506
ORF1ab/nsp13319E319DgaGgaT564564AY.970.959184
ORF1ab/nsp13319E319DgaGgaT214216B.1.617.20.000806
ORF1ab/nsp13319E319DgaGgaC2216B.1.617.20.000008
ORF1ab/nsp13319E319DgaGgaT204204AY.420.008207
ORF1ab/nsp13319E319DgaGgaT188188AY.430.000833
ORF1ab/nsp13319E319DgaGgaT178178B.10.00163
ORF1ab/nsp13319E319DgaGgaT170171B.1.20.001497
ORF1ab/nsp13319E319DgaGgaC1171B.1.20.000009
ORF1ab/nsp13319E319DgaGgaT101101P.10.001591
ORF1ab/nsp13319E319DgaGgaT9191B.1.1.70.000081
ORF1ab/nsp13319E319DgaGgaT8181B.1.10.001469
ORF1ab/nsp13319E319DgaGgaT6363AY.30.000627
ORF1ab/nsp13319E319DgaGgaT6162AY.250.000367
ORF1ab/nsp13319E319DgaGgaC162AY.250.000006
ORF1ab/nsp13319E319DgaGgaT5353AY.390.00131
ORF1ab/nsp13319E319DgaGgaT4952AY.440.000298
ORF1ab/nsp13319E319DgaGgaC352AY.440.000018
ORF1ab/nsp13319E319DgaGgaT5151AY.710.024228
ORF1ab/nsp13319E319DgaGgaT4242AY.290.000662
ORF1ab/nsp13319E319DgaGgaT4141B.1.4280.041837
ORF1ab/nsp13319E319DgaGgaT3737AY.1200.001376
ORF1ab/nsp13319E319DgaGgaT3333AY.1030.000205
ORF1ab/nsp13319E319DgaGgaT2832B.1.5960.00244
ORF1ab/nsp13319E319DgaGgaC432B.1.5960.000349
ORF1ab/nsp13319E319DgaGgaT2222AY.50.000454
ORF1ab/nsp13319E319DgaGgaT2121AY.1020.000557
ORF1ab/nsp13319E319DgaGgaT2020AY.99.20.001843
ORF1ab/nsp13319E319DgaGgaT1818AY.4.50.001935
ORF1ab/nsp13319E319DgaGgaT1616AY.130.002576
ORF1ab/nsp13319E319DgaGgaT1515AY.470.000467
ORF1ab/nsp13319E319DgaGgaT1515B.1.3240.024077
ORF1ab/nsp13319E319DgaGgaT1313B.1.3050.027957
ORF1ab/nsp13319E319DgaGgaT1212AY.230.000837
ORF1ab/nsp13319E319DgaGgaT1212AY.46.60.000866
ORF1ab/nsp13319E319DgaGgaT1212B.1.4290.000282
ORF1ab/nsp13319E319DgaGgaT1111AY.260.000311
ORF1ab/nsp13319E319DgaGgaT1010AY.200.000389
ORF1ab/nsp13319E319DgaGgaT1010AY.460.001041
ORF1ab/nsp13319E319DgaGgaT1010AY.7.10.001127
ORF1ab/nsp13319E319DgaGgaT1010AY.980.00079
ORF1ab/nsp13319E319DgaGgaT1010B.1.617.10.00129
ORF1ab/nsp13319E319DgaGgaT99AY.340.000873
ORF1ab/nsp13319E319DgaGgaT99B.1.5950.002349
ORF1ab/nsp13319E319DgaGgaT88AY.1170.000676
ORF1ab/nsp13319E319DgaGgaT88AY.1210.001083
ORF1ab/nsp13319E319DgaGgaT88AY.530.0023
ORF1ab/nsp13319E319DgaGgaT88AY.98.10.000387
ORF1ab/nsp13319E319DgaGgaT88B.1.5260.000188
ORF1ab/nsp13319E319DgaGgaT88B.1.5770.005498
ORF1ab/nsp13319E319DgaGgaT77AY.1160.002007
ORF1ab/nsp13319E319DgaGgaT77AY.330.000467
ORF1ab/nsp13319E319DgaGgaT77B.1.4370.145833
ORF1ab/nsp13319E319DgaGgaT66AY.4.40.002455
ORF1ab/nsp13319E319DgaGgaT66AY.410.001764
ORF1ab/nsp13319E319DgaGgaT66AY.850.002563
ORF1ab/nsp13319E319DgaGgaT66B.1.6210.000531
ORF1ab/nsp13319E319DgaGgaT55AY.1190.000177
ORF1ab/nsp13319E319DgaGgaT55AY.3.10.000426
ORF1ab/nsp13319E319DgaGgaT55AY.610.000524
ORF1ab/nsp13319E319DgaGgaT55AY.920.001436
ORF1ab/nsp13319E319DgaGgaT55B.1.1.5190.000199
ORF1ab/nsp13319E319DgaGgaT55B.1.2430.000348
ORF1ab/nsp13319E319DgaGgaT55B.1.360.00073
ORF1ab/nsp13319E319DgaGgaT55B.1.3670.003962
ORF1ab/nsp13319E319DgaGgaT55P.1.10.001588
ORF1ab/nsp13319E319DgaGgaT55Q.10.000632
ORF1ab/nsp13319E319DgaGgaT55R.10.00045
ORF1ab/nsp13319E319DgaGgaT44AY.1130.00057
ORF1ab/nsp13319E319DgaGgaT44AY.160.001519
ORF1ab/nsp13319E319DgaGgaT44AY.360.000593
ORF1ab/nsp13319E319DgaGgaT44AY.4.20.000087
ORF1ab/nsp13319E319DgaGgaT44AY.5.40.001107
ORF1ab/nsp13319E319DgaGgaT44AY.700.000834
ORF1ab/nsp13319E319DgaGgaT44AY.880.003537
ORF1ab/nsp13319E319DgaGgaT44AY.9.20.000147
ORF1ab/nsp13319E319DgaGgaT44B.1.1.2070.004728
ORF1ab/nsp13319E319DgaGgaT44B.1.1.4480.00813
ORF1ab/nsp13319E319DgaGgaT44B.1.177.820.001909
ORF1ab/nsp13319E319DgaGgaT44B.1.2060.003263
ORF1ab/nsp13319E319DgaGgaT44D.50.0199
ORF1ab/nsp13319E319DgaGgaT33AY.450.000365
ORF1ab/nsp13319E319DgaGgaT33AY.550.002752
ORF1ab/nsp13319E319DgaGgaT33AY.720.004082
ORF1ab/nsp13319E319DgaGgaT33AY.90.000203
ORF1ab/nsp13319E319DgaGgaT33B.1.1.1570.00274
ORF1ab/nsp13319E319DgaGgaT33B.1.1600.000094
ORF1ab/nsp13319E319DgaGgaT33B.1.2210.000213
ORF1ab/nsp13319E319DgaGgaT33B.1.2580.0002
ORF1ab/nsp13319E319DgaGgaT33B.1.4160.003807
ORF1ab/nsp13319E319DgaGgaT33B.1.5680.003333
ORF1ab/nsp13319E319DgaGgaT33B.1.5750.00091
ORF1ab/nsp13319E319DgaGgaT33B.1.5800.012195
ORF1ab/nsp13319E319DgaGgaT33B.1.6370.000219
ORF1ab/nsp13319E319DgaGgaT22AY.100.00106
ORF1ab/nsp13319E319DgaGgaT22AY.1000.000092
ORF1ab/nsp13319E319DgaGgaT22AY.1060.00067
ORF1ab/nsp13319E319DgaGgaT22AY.1140.000462
ORF1ab/nsp13319E319DgaGgaT22AY.16.10.00094
ORF1ab/nsp13319E319DgaGgaT22AY.280.003781
ORF1ab/nsp13319E319DgaGgaT22AY.320.001065
ORF1ab/nsp13319E319DgaGgaT22AY.4.30.001684
ORF1ab/nsp13319E319DgaGgaT22AY.480.00093
ORF1ab/nsp13319E319DgaGgaT22AY.60.000082
ORF1ab/nsp13319E319DgaGgaT22AY.750.000112
ORF1ab/nsp13319E319DgaGgaT22AY.820.002714
ORF1ab/nsp13319E319DgaGgaT22AY.840.000875
ORF1ab/nsp13319E319DgaGgaT22AY.870.001665
ORF1ab/nsp13319E319DgaGgaT22AY.930.000546
ORF1ab/nsp13319E319DgaGgaT22AY.940.000885
ORF1ab/nsp13319E319DgaGgaT22B.1.1.100.00223
ORF1ab/nsp13319E319DgaGgaT22B.1.1.2140.000111
ORF1ab/nsp13319E319DgaGgaT22B.1.1.2220.000408
ORF1ab/nsp13319E319DgaGgaT22B.1.1.250.001137
ORF1ab/nsp13319E319DgaGgaT22B.1.1.3060.000877
ORF1ab/nsp13319E319DgaGgaT22B.1.1.3560.017094
ORF1ab/nsp13319E319DgaGgaT22B.1.177.440.001038
ORF1ab/nsp13319E319DgaGgaT22B.1.177.730.001133
ORF1ab/nsp13319E319DgaGgaT22B.1.2340.000264
ORF1ab/nsp13319E319DgaGgaT22B.1.258.120.015748
ORF1ab/nsp13319E319DgaGgaT22B.1.3020.026667
ORF1ab/nsp13319E319DgaGgaT22B.1.3510.000059
ORF1ab/nsp13319E319DgaGgaT22B.1.36.170.000988
ORF1ab/nsp13319E319DgaGgaT22B.1.36.310.003503
ORF1ab/nsp13319E319DgaGgaT22B.1.3690.00057
ORF1ab/nsp13319E319DgaGgaT22B.1.3980.005952
ORF1ab/nsp13319E319DgaGgaT22B.1.5150.028986
ORF1ab/nsp13319E319DgaGgaT22B.1.5740.004301
ORF1ab/nsp13319E319DgaGgaT22B.1.5760.001813
ORF1ab/nsp13319E319DgaGgaT22B.1.5820.000981
ORF1ab/nsp13319E319DgaGgaT22B.1.6130.054054
ORF1ab/nsp13319E319DgaGgaT22C.36.30.001134
ORF1ab/nsp13319E319DgaGgaT22P.1.20.002312
ORF1ab/nsp13319E319DgaGgaT11A.2.5.20.001572
ORF1ab/nsp13319E319DgaGgaT11A.60.005128
ORF1ab/nsp13319E319DgaGgaT11AD.20.000219
ORF1ab/nsp13319E319DgaGgaT11AN.10.02
ORF1ab/nsp13319E319DgaGgaT11AY.10.000396
ORF1ab/nsp13319E319DgaGgaT11AY.1100.000113
ORF1ab/nsp13319E319DgaGgaT11AY.116.10.000311
ORF1ab/nsp13319E319DgaGgaT11AY.1180.000063
ORF1ab/nsp13319E319DgaGgaT11AY.120.000316
ORF1ab/nsp13319E319DgaGgaT11AY.120.10.000321
ORF1ab/nsp13319E319DgaGgaT11AY.120.20.001285
ORF1ab/nsp13319E319DgaGgaT11AY.23.10.000417
ORF1ab/nsp13319E319DgaGgaT11AY.240.000431
ORF1ab/nsp13319E319DgaGgaT11AY.300.000396
ORF1ab/nsp13319E319DgaGgaT11AY.34.10.00051
ORF1ab/nsp13319E319DgaGgaT11AY.39.10.00004
ORF1ab/nsp13319E319DgaGgaT11AY.400.000964
ORF1ab/nsp13319E319DgaGgaT11AY.46.10.001027
ORF1ab/nsp13319E319DgaGgaT11AY.46.40.000165
ORF1ab/nsp13319E319DgaGgaT11AY.5.30.000337
ORF1ab/nsp13319E319DgaGgaT11AY.650.000533
ORF1ab/nsp13319E319DgaGgaT11AY.690.000187
ORF1ab/nsp13319E319DgaGgaT11AY.780.001541
ORF1ab/nsp13319E319DgaGgaT11AY.950.000761
ORF1ab/nsp13319E319DgaGgaT11B.1.1.1980.001468
ORF1ab/nsp13319E319DgaGgaT11B.1.1.280.000311
ORF1ab/nsp13319E319DgaGgaT11B.1.1.310.066667
ORF1ab/nsp13319E319DgaGgaT11B.1.1.3120.001912
ORF1ab/nsp13319E319DgaGgaT11B.1.1.3290.003846
ORF1ab/nsp13319E319DgaGgaT11B.1.1.3490.010309
ORF1ab/nsp13319E319DgaGgaT11B.1.1.3670.055556
ORF1ab/nsp13319E319DgaGgaT11B.1.1.4160.000905
ORF1ab/nsp13319E319DgaGgaT11B.1.1.500.000679
ORF1ab/nsp13319E319DgaGgaT11B.1.1.5180.006329
ORF1ab/nsp13319E319DgaGgaT11B.1.1.5250.005464
ORF1ab/nsp13319E319DgaGgaT11B.1.1.700.000341
ORF1ab/nsp13319E319DgaGgaT11B.1.1390.000733
ORF1ab/nsp13319E319DgaGgaT11B.1.1420.002899
ORF1ab/nsp13319E319DgaGgaT11B.1.1470.000756
ORF1ab/nsp13319E319DgaGgaT11B.1.1570.002985
ORF1ab/nsp13319E319DgaGgaT11B.1.160.320.004292
ORF1ab/nsp13319E319DgaGgaT11B.1.160.330.004425
ORF1ab/nsp13319E319DgaGgaT11B.1.1770.000013
ORF1ab/nsp13319E319DgaGgaT11B.1.177.330.001645
ORF1ab/nsp13319E319DgaGgaT11B.1.177.350.000691
ORF1ab/nsp13319E319DgaGgaT11B.1.177.460.000918
ORF1ab/nsp13319E319DgaGgaT11B.1.177.870.000728
ORF1ab/nsp13319E319DgaGgaT11B.1.177.90.001332
ORF1ab/nsp13319E319DgaGgaT11B.1.2390.001221
ORF1ab/nsp13319E319DgaGgaT11B.1.258.170.000104
ORF1ab/nsp13319E319DgaGgaT11B.1.350.008475
ORF1ab/nsp13319E319DgaGgaT11B.1.36.290.000517
ORF1ab/nsp13319E319DgaGgaT11B.1.3850.010638
ORF1ab/nsp13319E319DgaGgaT11B.1.3910.001127
ORF1ab/nsp13319E319DgaGgaT11B.1.4260.001009
ORF1ab/nsp13319E319DgaGgaT11B.1.438.10.000107
ORF1ab/nsp13319E319DgaGgaT11B.1.5250.000113
ORF1ab/nsp13319E319DgaGgaT11B.1.5640.000426
ORF1ab/nsp13319E319DgaGgaT11B.1.575.10.002439
ORF1ab/nsp13319E319DgaGgaT11B.1.5880.00091
ORF1ab/nsp13319E319DgaGgaT11B.1.6090.000479
ORF1ab/nsp13319E319DgaGgaT11B.1.6270.00202
ORF1ab/nsp13319E319DgaGgaT11B.1.6280.000352
ORF1ab/nsp13319E319DgaGgaT11B.60.00091
ORF1ab/nsp13319E319DgaGgaT11C.40.01
ORF1ab/nsp13319E319DgaGgaT11N.50.001767
ORF1ab/nsp13319E319DgaGgaT11P.1.120.000484
ORF1ab/nsp13319E319DgaGgaT11P.1.150.000232
ORF1ab/nsp13319E319DgaGgaT11P.1.170.000162
ORF1ab/nsp13319E319DgaGgaT11P.20.000187
ORF1ab/nsp13319E319DgaGgaT11P.60.003145
ORF1ab/nsp13319E319DgaGgaT11Q.30.000145
ORF1ab/nsp13319E319DgaGgaT11Q.80.000165