CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = D260Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13260D260YD5584YnonsynGatTat66390663890.99998517014-17016
ORF1ab/nsp13260D260YD5584YnonsynGaTTaC6639010.000015062517014-17016

Details of the mutation D260Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13260D260YGatTat6638966390All0.012698
ORF1ab/nsp13260D260YGaTTaC166390All0
ORF1ab/nsp13260D260YGatTat4193441934B.1.4290.986659
ORF1ab/nsp13260D260YGatTat1960419604B.1.4270.989951
ORF1ab/nsp13260D260YGatTat13641365B.10.012494
ORF1ab/nsp13260D260YGaTTaC11365B.10.000009
ORF1ab/nsp13260D260YGatTat501501B.1.1.700.170873
ORF1ab/nsp13260D260YGatTat403403AY.370.12737
ORF1ab/nsp13260D260YGatTat393393AY.40.000612
ORF1ab/nsp13260D260YGatTat377377A.280.997354
ORF1ab/nsp13260D260YGatTat187187B.1.10.003392
ORF1ab/nsp13260D260YGatTat123123B.1.1.70.00011
ORF1ab/nsp13260D260YGatTat8383B.1.429.11
ORF1ab/nsp13260D260YGatTat8181AY.440.000493
ORF1ab/nsp13260D260YGatTat6262B.1.5950.01618
ORF1ab/nsp13260D260YGatTat5656B.1.617.20.000211
ORF1ab/nsp13260D260YGatTat4949B.1.1.4320.062025
ORF1ab/nsp13260D260YGatTat4949B.1.20.000431
ORF1ab/nsp13260D260YGatTat4747AY.430.000208
ORF1ab/nsp13260D260YGatTat4242B.1.1.2200.078067
ORF1ab/nsp13260D260YGatTat3636B.1.3110.009885
ORF1ab/nsp13260D260YGatTat3636B.1.940.972973
ORF1ab/nsp13260D260YGatTat3535AY.250.000211
ORF1ab/nsp13260D260YGatTat3434B.1.1.4160.030769
ORF1ab/nsp13260D260YGatTat2828AY.9.10.002344
ORF1ab/nsp13260D260YGatTat2727AY.570.017717
ORF1ab/nsp13260D260YGatTat2626AY.200.00101
ORF1ab/nsp13260D260YGatTat2626B.1.1.2140.001442
ORF1ab/nsp13260D260YGatTat2626B.1.5960.002266
ORF1ab/nsp13260D260YGatTat2121AY.75.10.003787
ORF1ab/nsp13260D260YGatTat1919AY.390.00047
ORF1ab/nsp13260D260YGatTat1919AY.850.008116
ORF1ab/nsp13260D260YGatTat1919B.1.2390.023199
ORF1ab/nsp13260D260YGatTat1919B.1.3670.015055
ORF1ab/nsp13260D260YGatTat1818AY.1020.000477
ORF1ab/nsp13260D260YGatTat1818B.1.1770.000237
ORF1ab/nsp13260D260YGatTat1717B.1.1600.00053
ORF1ab/nsp13260D260YGatTat1717P.10.000268
ORF1ab/nsp13260D260YGatTat1616AY.1200.000595
ORF1ab/nsp13260D260YGatTat1616B.1.1.5190.000635
ORF1ab/nsp13260D260YGatTat1616B.1.2430.001113
ORF1ab/nsp13260D260YGatTat1515B0.001917
ORF1ab/nsp13260D260YGatTat1414B.1.3360.034146
ORF1ab/nsp13260D260YGatTat1313A0.005031
ORF1ab/nsp13260D260YGatTat1313B.1.575.10.031707
ORF1ab/nsp13260D260YGatTat1212AY.1030.000075
ORF1ab/nsp13260D260YGatTat1111AY.30.000109
ORF1ab/nsp13260D260YGatTat1111B.1.6180.044355
ORF1ab/nsp13260D260YGatTat1010B.1.2340.001319
ORF1ab/nsp13260D260YGatTat99AY.470.00028
ORF1ab/nsp13260D260YGatTat99AY.98.10.000436
ORF1ab/nsp13260D260YGatTat99B.1.2580.000599
ORF1ab/nsp13260D260YGatTat88A.2.50.003992
ORF1ab/nsp13260D260YGatTat88AY.460.000833
ORF1ab/nsp13260D260YGatTat88B.1.1570.023881
ORF1ab/nsp13260D260YGatTat88B.1.5610.003176
ORF1ab/nsp13260D260YGatTat88B.1.6090.003835
ORF1ab/nsp13260D260YGatTat77AY.4.20.000152
ORF1ab/nsp13260D260YGatTat77B.1.1.1920.016166
ORF1ab/nsp13260D260YGatTat77B.1.1.3160.006475
ORF1ab/nsp13260D260YGatTat77B.1.360.001021
ORF1ab/nsp13260D260YGatTat77B.1.621.10.003541
ORF1ab/nsp13260D260YGatTat77B.110.035897
ORF1ab/nsp13260D260YGatTat66AY.39.10.000238
ORF1ab/nsp13260D260YGatTat66B.1.177.730.003398
ORF1ab/nsp13260D260YGatTat66B.1.2210.000426
ORF1ab/nsp13260D260YGatTat66B.1.5260.000141
ORF1ab/nsp13260D260YGatTat66B.1.617.10.000774
ORF1ab/nsp13260D260YGatTat66B.1.6230.003219
ORF1ab/nsp13260D260YGatTat66R.10.00054
ORF1ab/nsp13260D260YGatTat55AY.1190.000177
ORF1ab/nsp13260D260YGatTat55AY.230.000349
ORF1ab/nsp13260D260YGatTat55AY.260.000142
ORF1ab/nsp13260D260YGatTat55AY.50.000103
ORF1ab/nsp13260D260YGatTat55AY.750.00028
ORF1ab/nsp13260D260YGatTat55B.1.1.3350.064935
ORF1ab/nsp13260D260YGatTat55B.1.1.5070.043478
ORF1ab/nsp13260D260YGatTat55B.1.3750.004098
ORF1ab/nsp13260D260YGatTat55B.1.4410.048077
ORF1ab/nsp13260D260YGatTat44A.2.5.20.006289
ORF1ab/nsp13260D260YGatTat44AY.1070.001864
ORF1ab/nsp13260D260YGatTat44AY.1170.000338
ORF1ab/nsp13260D260YGatTat44AY.330.000267
ORF1ab/nsp13260D260YGatTat44AY.590.002119
ORF1ab/nsp13260D260YGatTat44AY.60.000165
ORF1ab/nsp13260D260YGatTat44B.1.1.3020.008299
ORF1ab/nsp13260D260YGatTat44B.1.3240.006421
ORF1ab/nsp13260D260YGatTat44B.1.4110.014815
ORF1ab/nsp13260D260YGatTat33AY.1000.000138
ORF1ab/nsp13260D260YGatTat33AY.120.000948
ORF1ab/nsp13260D260YGatTat33AY.340.000291
ORF1ab/nsp13260D260YGatTat33AY.610.000314
ORF1ab/nsp13260D260YGatTat33AY.980.000237
ORF1ab/nsp13260D260YGatTat33AZ.20.002463
ORF1ab/nsp13260D260YGatTat33B.1.1.2220.000612
ORF1ab/nsp13260D260YGatTat33B.1.1.2690.00406
ORF1ab/nsp13260D260YGatTat33B.1.1.3060.001315
ORF1ab/nsp13260D260YGatTat33B.1.1.3180.000905
ORF1ab/nsp13260D260YGatTat33B.1.1.330.001263
ORF1ab/nsp13260D260YGatTat33B.1.1.5170.020408
ORF1ab/nsp13260D260YGatTat33B.1.3510.000089
ORF1ab/nsp13260D260YGatTat33B.1.36.10.003421
ORF1ab/nsp13260D260YGatTat33B.1.3690.000856
ORF1ab/nsp13260D260YGatTat33B.1.5510.003871
ORF1ab/nsp13260D260YGatTat33P.20.00056
ORF1ab/nsp13260D260YGatTat33Q.80.000495
ORF1ab/nsp13260D260YGatTat22A.10.000564
ORF1ab/nsp13260D260YGatTat22A.20.001324
ORF1ab/nsp13260D260YGatTat22AP.10.003003
ORF1ab/nsp13260D260YGatTat22AY.1050.001286
ORF1ab/nsp13260D260YGatTat22AY.130.000322
ORF1ab/nsp13260D260YGatTat22AY.160.000759
ORF1ab/nsp13260D260YGatTat22AY.360.000296
ORF1ab/nsp13260D260YGatTat22AY.4.50.000215
ORF1ab/nsp13260D260YGatTat22AY.450.000243
ORF1ab/nsp13260D260YGatTat22AY.7.20.001119
ORF1ab/nsp13260D260YGatTat22AY.770.002255
ORF1ab/nsp13260D260YGatTat22AY.900.001369
ORF1ab/nsp13260D260YGatTat22AY.99.20.000184
ORF1ab/nsp13260D260YGatTat22AZ.30.00304
ORF1ab/nsp13260D260YGatTat22B.1.1.1700.002494
ORF1ab/nsp13260D260YGatTat22B.1.1.2290.011494
ORF1ab/nsp13260D260YGatTat22B.1.1.3010.002358
ORF1ab/nsp13260D260YGatTat22B.1.1.3480.001592
ORF1ab/nsp13260D260YGatTat22B.1.1.370.000386
ORF1ab/nsp13260D260YGatTat22B.1.1260.002551
ORF1ab/nsp13260D260YGatTat22B.1.177.650.001331
ORF1ab/nsp13260D260YGatTat22B.1.177.70.00033
ORF1ab/nsp13260D260YGatTat22B.1.2810.043478
ORF1ab/nsp13260D260YGatTat22B.1.36.290.001035
ORF1ab/nsp13260D260YGatTat22B.1.4000.000858
ORF1ab/nsp13260D260YGatTat22B.1.438.10.000215
ORF1ab/nsp13260D260YGatTat22B.1.466.20.000782
ORF1ab/nsp13260D260YGatTat22B.1.5640.000852
ORF1ab/nsp13260D260YGatTat22B.1.5800.00813
ORF1ab/nsp13260D260YGatTat22B.1.6370.000146
ORF1ab/nsp13260D260YGatTat22C.370.000232
ORF1ab/nsp13260D260YGatTat22D.20.00015
ORF1ab/nsp13260D260YGatTat22P.1.150.000465
ORF1ab/nsp13260D260YGatTat11A.23.10.000704
ORF1ab/nsp13260D260YGatTat11AD.20.000219
ORF1ab/nsp13260D260YGatTat11AY.100.00053
ORF1ab/nsp13260D260YGatTat11AY.1010.00049
ORF1ab/nsp13260D260YGatTat11AY.1060.000335
ORF1ab/nsp13260D260YGatTat11AY.1090.00074
ORF1ab/nsp13260D260YGatTat11AY.1110.000183
ORF1ab/nsp13260D260YGatTat11AY.1140.000231
ORF1ab/nsp13260D260YGatTat11AY.140.000088
ORF1ab/nsp13260D260YGatTat11AY.240.000431
ORF1ab/nsp13260D260YGatTat11AY.270.000065
ORF1ab/nsp13260D260YGatTat11AY.280.00189
ORF1ab/nsp13260D260YGatTat11AY.290.000016
ORF1ab/nsp13260D260YGatTat11AY.34.10.00051
ORF1ab/nsp13260D260YGatTat11AY.350.000233
ORF1ab/nsp13260D260YGatTat11AY.420.00004
ORF1ab/nsp13260D260YGatTat11AY.46.60.000072
ORF1ab/nsp13260D260YGatTat11AY.600.000938
ORF1ab/nsp13260D260YGatTat11AY.650.000533
ORF1ab/nsp13260D260YGatTat11AY.710.000475
ORF1ab/nsp13260D260YGatTat11AY.840.000437
ORF1ab/nsp13260D260YGatTat11AY.9.20.000037
ORF1ab/nsp13260D260YGatTat11AY.950.000761
ORF1ab/nsp13260D260YGatTat11B.1.1.10.000327
ORF1ab/nsp13260D260YGatTat11B.1.1.1890.001513
ORF1ab/nsp13260D260YGatTat11B.1.1.1960.005714
ORF1ab/nsp13260D260YGatTat11B.1.1.2070.001182
ORF1ab/nsp13260D260YGatTat11B.1.1.2160.00089
ORF1ab/nsp13260D260YGatTat11B.1.1.2250.007194
ORF1ab/nsp13260D260YGatTat11B.1.1.270.00565
ORF1ab/nsp13260D260YGatTat11B.1.1.2770.000759
ORF1ab/nsp13260D260YGatTat11B.1.1.280.000311
ORF1ab/nsp13260D260YGatTat11B.1.1.3170.000412
ORF1ab/nsp13260D260YGatTat11B.1.1.3750.011905
ORF1ab/nsp13260D260YGatTat11B.1.1.4090.002833
ORF1ab/nsp13260D260YGatTat11B.1.1.4640.001473
ORF1ab/nsp13260D260YGatTat11B.1.1.5140.038462
ORF1ab/nsp13260D260YGatTat11B.1.1.890.006061
ORF1ab/nsp13260D260YGatTat11B.1.1190.010526
ORF1ab/nsp13260D260YGatTat11B.1.130.002375
ORF1ab/nsp13260D260YGatTat11B.1.1470.000756
ORF1ab/nsp13260D260YGatTat11B.1.160.100.008065
ORF1ab/nsp13260D260YGatTat11B.1.177.120.000152
ORF1ab/nsp13260D260YGatTat11B.1.177.210.000076
ORF1ab/nsp13260D260YGatTat11B.1.177.350.000691
ORF1ab/nsp13260D260YGatTat11B.1.177.530.002392
ORF1ab/nsp13260D260YGatTat11B.1.177.600.000218
ORF1ab/nsp13260D260YGatTat11B.1.177.750.001041
ORF1ab/nsp13260D260YGatTat11B.1.1790.003759
ORF1ab/nsp13260D260YGatTat11B.1.2370.004975
ORF1ab/nsp13260D260YGatTat11B.1.2400.000216
ORF1ab/nsp13260D260YGatTat11B.1.2420.018868
ORF1ab/nsp13260D260YGatTat11B.1.2520.006623
ORF1ab/nsp13260D260YGatTat11B.1.258.170.000104
ORF1ab/nsp13260D260YGatTat11B.1.258.30.001675
ORF1ab/nsp13260D260YGatTat11B.1.2800.007143
ORF1ab/nsp13260D260YGatTat11B.1.2890.00266
ORF1ab/nsp13260D260YGatTat11B.1.3200.001245
ORF1ab/nsp13260D260YGatTat11B.1.3500.002933
ORF1ab/nsp13260D260YGatTat11B.1.3540.043478
ORF1ab/nsp13260D260YGatTat11B.1.3560.001727
ORF1ab/nsp13260D260YGatTat11B.1.36.240.006173
ORF1ab/nsp13260D260YGatTat11B.1.3800.006623
ORF1ab/nsp13260D260YGatTat11B.1.3810.007812
ORF1ab/nsp13260D260YGatTat11B.1.3960.000706
ORF1ab/nsp13260D260YGatTat11B.1.4160.001269
ORF1ab/nsp13260D260YGatTat11B.1.4370.020833
ORF1ab/nsp13260D260YGatTat11B.1.4510.008197
ORF1ab/nsp13260D260YGatTat11B.1.4710.002732
ORF1ab/nsp13260D260YGatTat11B.1.4970.000315
ORF1ab/nsp13260D260YGatTat11B.1.5030.002488
ORF1ab/nsp13260D260YGatTat11B.1.5090.000866
ORF1ab/nsp13260D260YGatTat11B.1.5170.000427
ORF1ab/nsp13260D260YGatTat11B.1.5500.013699
ORF1ab/nsp13260D260YGatTat11B.1.5770.000687
ORF1ab/nsp13260D260YGatTat11B.1.5900.004545
ORF1ab/nsp13260D260YGatTat11B.1.60.017241
ORF1ab/nsp13260D260YGatTat11B.1.6210.000089
ORF1ab/nsp13260D260YGatTat11B.1.6270.00202
ORF1ab/nsp13260D260YGatTat11B.1.6330.041667
ORF1ab/nsp13260D260YGatTat11B.1.6390.021739
ORF1ab/nsp13260D260YGatTat11B.1.780.008547
ORF1ab/nsp13260D260YGatTat11B.1.90.006173
ORF1ab/nsp13260D260YGatTat11B.1.9.40.006135
ORF1ab/nsp13260D260YGatTat11B.30.000831
ORF1ab/nsp13260D260YGatTat11B.350.007812
ORF1ab/nsp13260D260YGatTat11B.4.10.018868
ORF1ab/nsp13260D260YGatTat11K.10.02381
ORF1ab/nsp13260D260YGatTat11N.50.001767
ORF1ab/nsp13260D260YGatTat11P.1.10.000318
ORF1ab/nsp13260D260YGatTat11P.1.170.000162
ORF1ab/nsp13260D260YGatTat11P.40.003802
ORF1ab/nsp13260D260YGatTat11Q.10.000126
ORF1ab/nsp13260D260YGatTat11Q.30.000145