CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp13 | 8 | C8C | C5332C | syn | tgC | tgT | 15689 | 15689 | 1 | 16258-16260 |
Details of the mutation C8C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 15689 | 15689 | All | 0.003001 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3333 | 3333 | B.1.369 | 0.950656 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2659 | 2659 | B.1.1.7 | 0.00238 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2233 | 2233 | B.1.564 | 0.951022 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1805 | 1805 | B.1.1.37 | 0.34812 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 634 | 634 | B.1.564.1 | 1 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 479 | 479 | B.1 | 0.004387 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 344 | 344 | AY.103 | 0.002136 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 308 | 308 | P.1 | 0.004852 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 268 | 268 | AY.4 | 0.000417 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 251 | 251 | AY.44 | 0.001528 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 231 | 231 | B.1.617.2 | 0.00087 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 203 | 203 | AY.25 | 0.001221 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 198 | 198 | B.1.1.519 | 0.007863 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 190 | 190 | AY.27 | 0.012297 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 161 | 161 | B.1.2 | 0.001418 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 144 | 144 | B.1.160.11 | 0.822857 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 137 | 137 | B.1.160 | 0.004273 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 118 | 118 | AY.3 | 0.001174 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 99 | 99 | B.1.571 | 0.961165 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 93 | 93 | B.1.177 | 0.001225 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 84 | 84 | B.1.1 | 0.001524 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 73 | 73 | B.1.240 | 0.015736 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 70 | 70 | AY.120 | 0.002603 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 60 | 60 | AY.43 | 0.000266 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 52 | 52 | AY.102 | 0.001379 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 49 | 49 | B.1.243 | 0.00341 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 46 | 46 | B.1.351 | 0.001367 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 43 | 43 | AY.6 | 0.001769 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 37 | 37 | B.1.369.1 | 1 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 36 | 36 | AY.98 | 0.002844 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 34 | 34 | AD.2 | 0.007445 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 34 | 34 | AY.29 | 0.000536 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 30 | 30 | P.1.14 | 0.001434 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 29 | 29 | AY.4.2 | 0.000629 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 27 | 27 | AY.46.6 | 0.00195 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 27 | 27 | B.1.617.1 | 0.003482 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 25 | 25 | AY.5 | 0.000516 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 24 | 24 | AY.3.1 | 0.002046 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 24 | 24 | B.1.429 | 0.000565 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 23 | 23 | AY.13 | 0.003703 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 23 | 23 | B.1.596 | 0.002004 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 21 | 21 | AY.20 | 0.000816 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 21 | 21 | AY.26 | 0.000595 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 20 | 20 | AY.67 | 0.009285 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 20 | 20 | AY.86 | 0.016598 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 20 | 20 | B.1.1.220 | 0.037175 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 20 | 20 | B.1.561 | 0.00794 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 19 | 19 | AY.117 | 0.001606 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 19 | 19 | AY.39 | 0.00047 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 19 | 19 | B.1.607 | 1 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 18 | 18 | AY.88 | 0.015915 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 18 | 18 | B.1.621 | 0.001593 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 17 | 17 | B.1.1.70 | 0.005798 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 16 | 16 | AY.64 | 0.009524 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 16 | 16 | B.1.526 | 0.000376 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 14 | 14 | AY.84 | 0.006124 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 13 | 13 | B.1.258 | 0.000865 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 12 | 12 | AY.61 | 0.001257 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 12 | 12 | B.1.1.326 | 0.021127 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 12 | 12 | B.1.160.8 | 0.015464 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 12 | 12 | B.1.588 | 0.010919 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 12 | 12 | XA | 0.266667 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 11 | 11 | AY.23 | 0.000767 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 11 | 11 | AY.33 | 0.000735 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 11 | 11 | B.1.177.21 | 0.000841 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 11 | 11 | B.1.367 | 0.008716 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 11 | 11 | B.1.425 | 0.032934 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 10 | 10 | B.1.1.434 | 0.003486 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 9 | 9 | AY.111 | 0.001648 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 9 | 9 | AY.113 | 0.001282 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 9 | 9 | AY.98.1 | 0.000436 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 9 | 9 | B.1.1.214 | 0.000499 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 9 | 9 | B.1.1.25 | 0.005117 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 9 | 9 | B.1.1.521 | 0.048128 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 9 | 9 | B.1.427 | 0.000454 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 8 | 8 | AY.47 | 0.000249 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 8 | 8 | B.1.221 | 0.000568 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 8 | 8 | B.1.36.8 | 0.008 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 8 | 8 | B.1.595 | 0.002088 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 7 | 7 | AY.118 | 0.000439 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 7 | 7 | AY.45 | 0.000852 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 7 | 7 | B.1.177.81 | 0.001325 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 7 | 7 | B.1.234 | 0.000924 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 7 | 7 | B.1.509 | 0.006061 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 7 | 7 | D.2 | 0.000525 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 7 | 7 | Q.1 | 0.000884 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 7 | 7 | Q.3 | 0.001015 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 7 | 7 | R.1 | 0.00063 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 6 | 6 | AY.7 | 0.001176 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 6 | 6 | B.1.1.28 | 0.001867 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 6 | 6 | B.1.177.73 | 0.003398 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 6 | 6 | B.1.466.2 | 0.002347 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 5 | 5 | A.2.5 | 0.002495 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 5 | 5 | AY.24 | 0.002155 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 5 | 5 | AY.42 | 0.000201 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 5 | 5 | AY.46 | 0.00052 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 5 | 5 | B.1.1.317 | 0.002058 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 5 | 5 | B.1.1.376 | 0.029762 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 5 | 5 | B.1.258.16 | 0.008183 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 5 | 5 | B.1.324 | 0.008026 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 5 | 5 | B.1.36.19 | 0.046296 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 5 | 5 | B.1.390 | 0.053191 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 5 | 5 | P.1.12 | 0.00242 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 4 | 4 | AY.100 | 0.000184 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 4 | 4 | AY.29.1 | 0.000882 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 4 | 4 | AY.46.4 | 0.000658 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 4 | 4 | AY.87 | 0.003331 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 4 | 4 | AY.9.2 | 0.000147 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 4 | 4 | AY.99.2 | 0.000369 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 4 | 4 | B.1.1.27 | 0.022599 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 4 | 4 | B.1.1.433 | 0.005698 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 4 | 4 | B.1.177.10 | 0.003512 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 4 | 4 | B.1.177.60 | 0.000874 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 4 | 4 | B.1.258.17 | 0.000416 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 4 | 4 | B.1.637 | 0.000292 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | A.2.5.2 | 0.004717 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | AE.8 | 0.001467 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | AY.121 | 0.000406 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | AY.16.1 | 0.00141 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | AY.38 | 0.001498 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | AY.39.1 | 0.000119 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | AY.4.2.1 | 0.000447 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | AY.5.4 | 0.00083 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | AY.74 | 0.000347 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | AY.9.2.1 | 0.005929 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | AY.93 | 0.000819 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | B.1.1.306 | 0.001315 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | B.1.177.9 | 0.003995 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | B.1.206 | 0.002447 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | B.1.241 | 0.002435 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | B.1.36 | 0.000438 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | B.1.36.29 | 0.001552 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | B.1.36.39 | 0.006652 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | B.1.478 | 0.035294 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | B.1.560 | 0.013889 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | B.1.582 | 0.001472 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | B.1.606 | 0.018072 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | B.40 | 0.001093 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | B.6.6 | 0.002667 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | C.37 | 0.000348 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | P.1.15 | 0.000697 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | P.2 | 0.00056 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | P.3 | 0.004785 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 3 | 3 | Q.8 | 0.000495 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | A | 0.000774 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | AY.30 | 0.000791 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | AY.34 | 0.000194 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | AY.53 | 0.000575 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | AY.62 | 0.000871 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | AY.70 | 0.000417 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | AY.73 | 0.001331 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | AY.99 | 0.002099 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.1.348 | 0.001592 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.1.356 | 0.017094 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.1.389 | 0.012121 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.1.416 | 0.00181 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.177.4 | 0.000422 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.177.5 | 0.002484 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.177.52 | 0.003515 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.177.6 | 0.001953 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.195 | 0.01005 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.237 | 0.00995 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.332 | 0.006993 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.336 | 0.004878 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.448 | 0.005249 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.572 | 0.05 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.576 | 0.001813 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.577 | 0.001375 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.580 | 0.00813 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.618 | 0.008065 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | B.1.625 | 0.004706 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | C.30 | 0.003454 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 2 | 2 | P.1.7 | 0.000639 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | A.2.4 | 0.003367 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | A.27 | 0.001656 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | A.5 | 0.001923 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.28 | 0.00189 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.89 | 0.004902 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B | 0.000128 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.101 | 0.01 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.174 | 0.003378 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.177 | 0.019231 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.196 | 0.005714 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.263 | 0.001558 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.268 | 0.014925 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.329 | 0.003846 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.334 | 0.016393 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.34 | 0.013158 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.344 | 0.010753 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.355 | 0.015385 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.368 | 0.003086 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.375 | 0.011905 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.411 | 0.014706 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.441 | 0.05 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.518 | 0.006329 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.525 | 0.005464 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.1.83 | 0.00271 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.160.10 | 0.008065 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.160.12 | 0.00641 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.160.16 | 0.000929 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.177.23 | 0.003236 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.223 | 0.002778 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.229 | 0.009709 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.284 | 0.013158 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.329 | 0.000608 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.333 | 0.010526 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.36.17 | 0.000494 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.36.22 | 0.001208 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.371 | 0.001122 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.397 | 0.004854 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.402 | 0.009804 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.436 | 0.001029 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.501 | 0.007353 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.589 | 0.007576 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.619.1 | 0.000641 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.78 | 0.008547 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.1.88.1 | 0.004808 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.39 | 0.002331 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | B.55 | 0.00295 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp13 | 8 | C8C | tgC | tgT | 1 | 1 | P.1.1 | 0.000318 |
![]() |
![]() |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|