CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = C50del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1350C50delC5374deldelTGC---5555116384-16386

Details of the mutation C50del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1350C50delTGC---5555All0.000011
ORF1ab/nsp1350C50delTGC---2727B.1.1.70.000024
ORF1ab/nsp1350C50delTGC---44AY.430.000018
ORF1ab/nsp1350C50delTGC---220.111111
ORF1ab/nsp1350C50delTGC---22AY.40.000003
ORF1ab/nsp1350C50delTGC---22AY.4.50.000215
ORF1ab/nsp1350C50delTGC---22B.1.617.20.000008
ORF1ab/nsp1350C50delTGC---11AY.1110.000183
ORF1ab/nsp1350C50delTGC---11AY.30.00001
ORF1ab/nsp1350C50delTGC---11AY.330.000067
ORF1ab/nsp1350C50delTGC---11AY.670.000464
ORF1ab/nsp1350C50delTGC---11AY.990.001049
ORF1ab/nsp1350C50delTGC---11B.1.10.000018
ORF1ab/nsp1350C50delTGC---11B.1.1.700.000341
ORF1ab/nsp1350C50delTGC---11B.1.1770.000013
ORF1ab/nsp1350C50delTGC---11B.1.177.40.000211
ORF1ab/nsp1350C50delTGC---11B.1.177.620.001192
ORF1ab/nsp1350C50delTGC---11B.1.177.680.015152
ORF1ab/nsp1350C50delTGC---11B.1.177.70.000165
ORF1ab/nsp1350C50delTGC---11B.1.177.730.000566
ORF1ab/nsp1350C50delTGC---11B.1.177.830.001481
ORF1ab/nsp1350C50delTGC---11B.1.2210.000071
ORF1ab/nsp1350C50delTGC---11B.1.416.10.001563