CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = C50Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1350C50YC5374YnonsyntGctAc12110.91666716384-16386
ORF1ab/nsp1350C50YC5374YnonsyntGCtAT1210.083333316384-16386

Details of the mutation C50Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1350C50YtGctAc1112All0.000002
ORF1ab/nsp1350C50YtGCtAT112All0
ORF1ab/nsp1350C50YtGctAc55B.6.60.004444
ORF1ab/nsp1350C50YtGctAc44B.60.00364
ORF1ab/nsp1350C50YtGCtAT11AY.1130.000142
ORF1ab/nsp1350C50YtGctAc11B.10.000009
ORF1ab/nsp1350C50YtGctAc11B.1.1.70.000001