CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = C50S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1350C50SC5374SnonsyntGctCc750.71428616384-16386
ORF1ab/nsp1350C50SC5374SnonsyntGCtCT720.28571416384-16386

Details of the mutation C50S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1350C50StGctCc57All0.000001
ORF1ab/nsp1350C50StGCtCT27All0
ORF1ab/nsp1350C50StGctCc350.166667
ORF1ab/nsp1350C50StGCtCT250.111111
ORF1ab/nsp1350C50StGctCc11AY.440.000006
ORF1ab/nsp1350C50StGctCc11B.1.3750.00082