CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = A52V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1352A52VA5376VnonsyngCtgTt417941770.99952116390-16392
ORF1ab/nsp1352A52VA5376VnonsyngCTgTC417920.00047858316390-16392

Details of the mutation A52V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1352A52VgCtgTt41774179All0.000799
ORF1ab/nsp1352A52VgCTgTC24179All0
ORF1ab/nsp1352A52VgCtgTt33853385B.1.1.70.00303
ORF1ab/nsp1352A52VgCtgTt374374A.280.989418
ORF1ab/nsp1352A52VgCtgTt9090AY.40.00014
ORF1ab/nsp1352A52VgCtgTt4040B.1.10.000726
ORF1ab/nsp1352A52VgCtgTt3838B.1.4270.001919
ORF1ab/nsp1352A52VgCtgTt2626B.10.000238
ORF1ab/nsp1352A52VgCtgTt2424B.1.1770.000316
ORF1ab/nsp1352A52VgCtgTt1919B.1.1.4330.027066
ORF1ab/nsp1352A52VgCtgTt1919B.1.5410.084071
ORF1ab/nsp1352A52VgCtgTt1313D.20.000976
ORF1ab/nsp1352A52VgCtgTt1212B.1.20.000106
ORF1ab/nsp1352A52VgCtgTt1010B.1.1.280.003112
ORF1ab/nsp1352A52VgCtgTt99B.1.1470.006803
ORF1ab/nsp1352A52VgCtgTt88A0.003096
ORF1ab/nsp1352A52VgCtgTt88B.1.2580.000532
ORF1ab/nsp1352A52VgCtgTt88B.1.617.20.00003
ORF1ab/nsp1352A52VgCtgTt77B0.000895
ORF1ab/nsp1352A52VgCtgTt240.111111
ORF1ab/nsp1352A52VgCTgTC240.111111
ORF1ab/nsp1352A52VgCtgTt44A.210.01108
ORF1ab/nsp1352A52VgCtgTt44AY.200.000155
ORF1ab/nsp1352A52VgCtgTt44B.1.3750.003279
ORF1ab/nsp1352A52VgCtgTt44B.1.4290.000094
ORF1ab/nsp1352A52VgCtgTt44P.10.000063
ORF1ab/nsp1352A52VgCtgTt33B.1.1.3360.05
ORF1ab/nsp1352A52VgCtgTt33B.1.1600.000094
ORF1ab/nsp1352A52VgCtgTt33B.1.2430.000209
ORF1ab/nsp1352A52VgCtgTt33B.1.4160.003807
ORF1ab/nsp1352A52VgCtgTt22A.2.50.000998
ORF1ab/nsp1352A52VgCtgTt22AY.1030.000012
ORF1ab/nsp1352A52VgCtgTt22AY.250.000012
ORF1ab/nsp1352A52VgCtgTt22AY.390.000049
ORF1ab/nsp1352A52VgCtgTt22AY.9.20.000073
ORF1ab/nsp1352A52VgCtgTt22B.1.1.3690.000892
ORF1ab/nsp1352A52VgCtgTt22B.1.1570.00597
ORF1ab/nsp1352A52VgCtgTt22B.1.177.210.000153
ORF1ab/nsp1352A52VgCtgTt22B.1.2210.000142
ORF1ab/nsp1352A52VgCtgTt22B.1.4260.002018
ORF1ab/nsp1352A52VgCtgTt22Q.40.00091
ORF1ab/nsp1352A52VgCtgTt11A.250.018182
ORF1ab/nsp1352A52VgCtgTt11AY.1200.000037
ORF1ab/nsp1352A52VgCtgTt11AY.230.00007
ORF1ab/nsp1352A52VgCtgTt11AY.260.000028
ORF1ab/nsp1352A52VgCtgTt11AY.440.000006
ORF1ab/nsp1352A52VgCtgTt11AY.60.000041
ORF1ab/nsp1352A52VgCtgTt11B.1.1.1610.003534
ORF1ab/nsp1352A52VgCtgTt11B.1.1.1800.010753
ORF1ab/nsp1352A52VgCtgTt11B.1.1.2140.000055
ORF1ab/nsp1352A52VgCtgTt11B.1.1.2220.000204
ORF1ab/nsp1352A52VgCtgTt11B.1.1.250.000569
ORF1ab/nsp1352A52VgCtgTt11B.1.1.390.00051
ORF1ab/nsp1352A52VgCtgTt11B.1.1.4060.006494
ORF1ab/nsp1352A52VgCtgTt11B.1.1.700.000341
ORF1ab/nsp1352A52VgCtgTt11B.1.177.330.001645
ORF1ab/nsp1352A52VgCtgTt11B.1.177.40.000211
ORF1ab/nsp1352A52VgCtgTt11B.1.177.420.000894
ORF1ab/nsp1352A52VgCtgTt11B.1.177.480.003125
ORF1ab/nsp1352A52VgCtgTt11B.1.177.570.000281
ORF1ab/nsp1352A52VgCtgTt11B.1.177.70.000165
ORF1ab/nsp1352A52VgCtgTt11B.1.177.730.000566
ORF1ab/nsp1352A52VgCtgTt11B.1.258.170.000104
ORF1ab/nsp1352A52VgCtgTt11B.1.3960.000706
ORF1ab/nsp1352A52VgCtgTt11B.1.438.10.000107
ORF1ab/nsp1352A52VgCtgTt11B.1.4970.000315
ORF1ab/nsp1352A52VgCtgTt11B.1.5260.000024
ORF1ab/nsp1352A52VgCtgTt11B.1.5960.000087
ORF1ab/nsp1352A52VgCtgTt11B.1.6210.000089
ORF1ab/nsp1352A52VgCtgTt11B.60.00091
ORF1ab/nsp1352A52VgCtgTt11P.1.70.000319
ORF1ab/nsp1352A52VgCtgTt11Q.80.000165