CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = A379V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13379A379VA5703VnonsyngCcgTc664664117371-17373

Details of the mutation A379V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13379A379VgCcgTc664664All0.000127
ORF1ab/nsp13379A379VgCcgTc160160AY.250.000962
ORF1ab/nsp13379A379VgCcgTc5555B.1.1.70.000049
ORF1ab/nsp13379A379VgCcgTc4242B.10.000385
ORF1ab/nsp13379A379VgCcgTc3939B.1.20.000343
ORF1ab/nsp13379A379VgCcgTc2828AY.40.000044
ORF1ab/nsp13379A379VgCcgTc2323AY.430.000102
ORF1ab/nsp13379A379VgCcgTc2020B.1.3510.000595
ORF1ab/nsp13379A379VgCcgTc1919B.1.5260.000447
ORF1ab/nsp13379A379VgCcgTc1919B.1.617.20.000072
ORF1ab/nsp13379A379VgCcgTc1818B.1.2210.001279
ORF1ab/nsp13379A379VgCcgTc1616B.1.2340.002111
ORF1ab/nsp13379A379VgCcgTc1111B.1.36.380.018062
ORF1ab/nsp13379A379VgCcgTc1010B.1.1600.000312
ORF1ab/nsp13379A379VgCcgTc1010B.1.4290.000235
ORF1ab/nsp13379A379VgCcgTc99AY.290.000142
ORF1ab/nsp13379A379VgCcgTc99B.1.10.000163
ORF1ab/nsp13379A379VgCcgTc99P.10.000142
ORF1ab/nsp13379A379VgCcgTc88AY.440.000049
ORF1ab/nsp13379A379VgCcgTc77AY.200.000272
ORF1ab/nsp13379A379VgCcgTc66AY.1030.000037
ORF1ab/nsp13379A379VgCcgTc66AY.1190.000212
ORF1ab/nsp13379A379VgCcgTc66AY.30.00006
ORF1ab/nsp13379A379VgCcgTc66B.1.1.2220.001224
ORF1ab/nsp13379A379VgCcgTc66B.1.1770.000079
ORF1ab/nsp13379A379VgCcgTc55AY.390.000124
ORF1ab/nsp13379A379VgCcgTc55B.1.5950.001305
ORF1ab/nsp13379A379VgCcgTc44AY.750.000224
ORF1ab/nsp13379A379VgCcgTc44B.1.1.3250.102564
ORF1ab/nsp13379A379VgCcgTc44B.1.1.370.000771
ORF1ab/nsp13379A379VgCcgTc44B.1.5960.000349
ORF1ab/nsp13379A379VgCcgTc33A.2.50.001497
ORF1ab/nsp13379A379VgCcgTc33AY.1020.00008
ORF1ab/nsp13379A379VgCcgTc33AY.1180.000188
ORF1ab/nsp13379A379VgCcgTc33AY.3.10.000256
ORF1ab/nsp13379A379VgCcgTc33B.1.1.2140.000166
ORF1ab/nsp13379A379VgCcgTc33B.1.1.5190.000119
ORF1ab/nsp13379A379VgCcgTc33B.6.80.024793
ORF1ab/nsp13379A379VgCcgTc33P.60.009434
ORF1ab/nsp13379A379VgCcgTc22AY.1170.000169
ORF1ab/nsp13379A379VgCcgTc22AY.1200.000074
ORF1ab/nsp13379A379VgCcgTc22B.1.1.270.011299
ORF1ab/nsp13379A379VgCcgTc22B.1.1.3060.000877
ORF1ab/nsp13379A379VgCcgTc22B.1.177.210.000153
ORF1ab/nsp13379A379VgCcgTc22B.1.214.20.001199
ORF1ab/nsp13379A379VgCcgTc22B.1.2580.000133
ORF1ab/nsp13379A379VgCcgTc22B.1.351.50.001199
ORF1ab/nsp13379A379VgCcgTc22B.1.4510.016393
ORF1ab/nsp13379A379VgCcgTc22B.1.5880.00182
ORF1ab/nsp13379A379VgCcgTc22B.1.617.10.000258
ORF1ab/nsp13379A379VgCcgTc22D.20.00015
ORF1ab/nsp13379A379VgCcgTc22P.20.000373
ORF1ab/nsp13379A379VgCcgTc11A0.000387
ORF1ab/nsp13379A379VgCcgTc11AY.120.000316
ORF1ab/nsp13379A379VgCcgTc11AY.230.00007
ORF1ab/nsp13379A379VgCcgTc11AY.260.000028
ORF1ab/nsp13379A379VgCcgTc11AY.320.000532
ORF1ab/nsp13379A379VgCcgTc11AY.340.000097
ORF1ab/nsp13379A379VgCcgTc11AY.4.50.000107
ORF1ab/nsp13379A379VgCcgTc11AY.460.000104
ORF1ab/nsp13379A379VgCcgTc11AY.46.20.000635
ORF1ab/nsp13379A379VgCcgTc11AY.46.60.000072
ORF1ab/nsp13379A379VgCcgTc11AY.470.000031
ORF1ab/nsp13379A379VgCcgTc11AY.540.000095
ORF1ab/nsp13379A379VgCcgTc11AY.60.000041
ORF1ab/nsp13379A379VgCcgTc11AY.90.000068
ORF1ab/nsp13379A379VgCcgTc11AY.9.20.000037
ORF1ab/nsp13379A379VgCcgTc11AY.900.000684
ORF1ab/nsp13379A379VgCcgTc11AY.930.000273
ORF1ab/nsp13379A379VgCcgTc11AY.98.10.000048
ORF1ab/nsp13379A379VgCcgTc11AY.99.20.000092
ORF1ab/nsp13379A379VgCcgTc11AZ.20.000821
ORF1ab/nsp13379A379VgCcgTc11B0.000128
ORF1ab/nsp13379A379VgCcgTc11B.1.1.3480.000796
ORF1ab/nsp13379A379VgCcgTc11B.1.1400.018868
ORF1ab/nsp13379A379VgCcgTc11B.1.1430.021277
ORF1ab/nsp13379A379VgCcgTc11B.1.160.180.007299
ORF1ab/nsp13379A379VgCcgTc11B.1.160.70.002079
ORF1ab/nsp13379A379VgCcgTc11B.1.177.230.003236
ORF1ab/nsp13379A379VgCcgTc11B.1.1890.004292
ORF1ab/nsp13379A379VgCcgTc11B.1.2140.003663
ORF1ab/nsp13379A379VgCcgTc11B.1.2430.00007
ORF1ab/nsp13379A379VgCcgTc11B.1.258.170.000104
ORF1ab/nsp13379A379VgCcgTc11B.1.3690.000285
ORF1ab/nsp13379A379VgCcgTc11B.1.4380.006536
ORF1ab/nsp13379A379VgCcgTc11B.1.438.10.000107
ORF1ab/nsp13379A379VgCcgTc11B.1.4410.009615
ORF1ab/nsp13379A379VgCcgTc11B.1.5250.000113
ORF1ab/nsp13379A379VgCcgTc11B.1.5330.009615
ORF1ab/nsp13379A379VgCcgTc11B.1.5380.008065
ORF1ab/nsp13379A379VgCcgTc11B.1.5820.000491
ORF1ab/nsp13379A379VgCcgTc11B.1.596.10.009346
ORF1ab/nsp13379A379VgCcgTc11B.1.6090.000479
ORF1ab/nsp13379A379VgCcgTc11B.400.000364
ORF1ab/nsp13379A379VgCcgTc11P.1.10.000318
ORF1ab/nsp13379A379VgCcgTc11P.1.70.000319
ORF1ab/nsp13379A379VgCcgTc11Q.80.000165
ORF1ab/nsp13379A379VgCcgTc11R.10.00009