CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = A336A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13336A336AA5660AsyngcAgcG4254200.98823517242-17244
ORF1ab/nsp13336A336AA5660AsyngcAgcC42530.0070588217242-17244
ORF1ab/nsp13336A336AA5660AsyngcAgcT42520.0047058817242-17244

Details of the mutation A336A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13336A336AgcAgcG420425All0.00008
ORF1ab/nsp13336A336AgcAgcC3425All0.000001
ORF1ab/nsp13336A336AgcAgcT2425All0
ORF1ab/nsp13336A336AgcAgcG205205AY.1060.068654
ORF1ab/nsp13336A336AgcAgcG8787B.1.1.3020.180498
ORF1ab/nsp13336A336AgcAgcG3636B.1.1.70.000032
ORF1ab/nsp13336A336AgcAgcG2424AY.430.000106
ORF1ab/nsp13336A336AgcAgcG1516B.1.617.20.000056
ORF1ab/nsp13336A336AgcAgcT116B.1.617.20.000004
ORF1ab/nsp13336A336AgcAgcG1111AY.1030.000068
ORF1ab/nsp13336A336AgcAgcG55AY.340.000485
ORF1ab/nsp13336A336AgcAgcG44AY.40.000006
ORF1ab/nsp13336A336AgcAgcG34B.10.000027
ORF1ab/nsp13336A336AgcAgcC14B.10.000009
ORF1ab/nsp13336A336AgcAgcG44B.1.10.000073
ORF1ab/nsp13336A336AgcAgcG33AY.1170.000254
ORF1ab/nsp13336A336AgcAgcG33B.1.177.40.000633
ORF1ab/nsp13336A336AgcAgcG33P.10.000047
ORF1ab/nsp13336A336AgcAgcG12AY.250.000006
ORF1ab/nsp13336A336AgcAgcC12AY.250.000006
ORF1ab/nsp13336A336AgcAgcG22AY.4.20.000043
ORF1ab/nsp13336A336AgcAgcG22AY.540.000191
ORF1ab/nsp13336A336AgcAgcT12B.1.2580.000067
ORF1ab/nsp13336A336AgcAgcC12B.1.2580.000067
ORF1ab/nsp13336A336AgcAgcG11AY.1100.000113
ORF1ab/nsp13336A336AgcAgcG11AY.360.000148
ORF1ab/nsp13336A336AgcAgcG11AY.440.000006
ORF1ab/nsp13336A336AgcAgcG11AY.90.000068
ORF1ab/nsp13336A336AgcAgcG11AY.910.00073
ORF1ab/nsp13336A336AgcAgcG11AY.980.000079
ORF1ab/nsp13336A336AgcAgcG11B.1.1600.000031
ORF1ab/nsp13336A336AgcAgcG11B.1.177.530.002392
ORF1ab/nsp13336A336AgcAgcG11B.1.177.620.001192
ORF1ab/nsp13336A336AgcAgcG11B.1.2210.000071
ORF1ab/nsp13336A336AgcAgcG11B.1.3510.00003
ORF1ab/nsp13336A336AgcAgcG11B.1.4700.001404