CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = A292S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13292A292SA5616SnonsynGctTct13571357117110-17112

Details of the mutation A292S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13292A292SGctTct13571357All0.00026
ORF1ab/nsp13292A292SGctTct10331033B.1.6200.977294
ORF1ab/nsp13292A292SGctTct9595B.10.00087
ORF1ab/nsp13292A292SGctTct4040B.1.1600.001248
ORF1ab/nsp13292A292SGctTct3939B.1.1.70.000035
ORF1ab/nsp13292A292SGctTct1717AY.290.000268
ORF1ab/nsp13292A292SGctTct1010AY.40.000016
ORF1ab/nsp13292A292SGctTct88AY.690.001493
ORF1ab/nsp13292A292SGctTct77AY.440.000043
ORF1ab/nsp13292A292SGctTct77B.1.177.600.001529
ORF1ab/nsp13292A292SGctTct66AY.670.002786
ORF1ab/nsp13292A292SGctTct55AY.99.20.000461
ORF1ab/nsp13292A292SGctTct55B.1.20.000044
ORF1ab/nsp13292A292SGctTct55B.1.4990.005252
ORF1ab/nsp13292A292SGctTct44AY.430.000018
ORF1ab/nsp13292A292SGctTct44B.1.10.000073
ORF1ab/nsp13292A292SGctTct44B.1.1770.000053
ORF1ab/nsp13292A292SGctTct44B.270.061538
ORF1ab/nsp13292A292SGctTct33AY.1000.000138
ORF1ab/nsp13292A292SGctTct33AY.250.000018
ORF1ab/nsp13292A292SGctTct33AY.9.20.00011
ORF1ab/nsp13292A292SGctTct33P.10.000047
ORF1ab/nsp13292A292SGctTct22AY.1030.000012
ORF1ab/nsp13292A292SGctTct22AY.30.00002
ORF1ab/nsp13292A292SGctTct22B0.000256
ORF1ab/nsp13292A292SGctTct22B.1.1.3720.001377
ORF1ab/nsp13292A292SGctTct22B.1.2410.001623
ORF1ab/nsp13292A292SGctTct22B.1.258.170.000208
ORF1ab/nsp13292A292SGctTct22B.1.4270.000101
ORF1ab/nsp13292A292SGctTct22B.1.617.20.000008
ORF1ab/nsp13292A292SGctTct22P.1.120.000968
ORF1ab/nsp13292A292SGctTct22P.1.170.000324
ORF1ab/nsp13292A292SGctTct22Q.30.00029
ORF1ab/nsp13292A292SGctTct11A.20.000662
ORF1ab/nsp13292A292SGctTct11AK.10.012658
ORF1ab/nsp13292A292SGctTct11AY.1210.000135
ORF1ab/nsp13292A292SGctTct11AY.29.10.000221
ORF1ab/nsp13292A292SGctTct11AY.4.20.000022
ORF1ab/nsp13292A292SGctTct11AY.4.2.10.000149
ORF1ab/nsp13292A292SGctTct11AY.46.30.000934
ORF1ab/nsp13292A292SGctTct11AY.710.000475
ORF1ab/nsp13292A292SGctTct11AY.750.000056
ORF1ab/nsp13292A292SGctTct11AY.90.000068
ORF1ab/nsp13292A292SGctTct11AY.9.10.000084
ORF1ab/nsp13292A292SGctTct11AZ.30.00152
ORF1ab/nsp13292A292SGctTct11B.1.1.4120.007634
ORF1ab/nsp13292A292SGctTct11B.1.1.5190.00004
ORF1ab/nsp13292A292SGctTct11B.1.1390.000733
ORF1ab/nsp13292A292SGctTct11B.1.177.330.001645
ORF1ab/nsp13292A292SGctTct11B.1.177.540.000606
ORF1ab/nsp13292A292SGctTct11B.1.2140.003663
ORF1ab/nsp13292A292SGctTct11B.1.2340.000132
ORF1ab/nsp13292A292SGctTct11B.1.36.180.00042
ORF1ab/nsp13292A292SGctTct11B.1.400.019608
ORF1ab/nsp13292A292SGctTct11B.1.466.20.000391
ORF1ab/nsp13292A292SGctTct11B.1.4700.001404
ORF1ab/nsp13292A292SGctTct11B.1.4790.038462
ORF1ab/nsp13292A292SGctTct11B.1.5260.000024
ORF1ab/nsp13292A292SGctTct11B.1.5760.000907
ORF1ab/nsp13292A292SGctTct11B.1.617.10.000129
ORF1ab/nsp13292A292SGctTct11B.40.002208
ORF1ab/nsp13292A292SGctTct11C.370.000116
ORF1ab/nsp13292A292SGctTct11N.50.001767