CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = A18del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1318A18delA5342deldelGCT---9797116288-16290

Details of the mutation A18del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1318A18delGCT---9797All0.000019
ORF1ab/nsp1318A18delGCT---4444B.1.1.70.000039
ORF1ab/nsp1318A18delGCT---88B.1.1770.000105
ORF1ab/nsp1318A18delGCT---55AY.40.000008
ORF1ab/nsp1318A18delGCT---55AY.430.000022
ORF1ab/nsp1318A18delGCT---55B.1.617.20.000019
ORF1ab/nsp1318A18delGCT---33AY.4.50.000322
ORF1ab/nsp1318A18delGCT---220.111111
ORF1ab/nsp1318A18delGCT---22B.10.000018
ORF1ab/nsp1318A18delGCT---22B.1.10.000036
ORF1ab/nsp1318A18delGCT---11AY.1130.000142
ORF1ab/nsp1318A18delGCT---11AY.390.000025
ORF1ab/nsp1318A18delGCT---11AY.440.000006
ORF1ab/nsp1318A18delGCT---11AY.670.000464
ORF1ab/nsp1318A18delGCT---11AY.750.000056
ORF1ab/nsp1318A18delGCT---11AY.90.000068
ORF1ab/nsp1318A18delGCT---11AY.990.001049
ORF1ab/nsp1318A18delGCT---11B.1.1.3110.000358
ORF1ab/nsp1318A18delGCT---11B.1.177.180.00116
ORF1ab/nsp1318A18delGCT---11B.1.177.620.001192
ORF1ab/nsp1318A18delGCT---11B.1.177.680.015152
ORF1ab/nsp1318A18delGCT---11B.1.177.70.000165
ORF1ab/nsp1318A18delGCT---11B.1.177.730.000566
ORF1ab/nsp1318A18delGCT---11B.1.20.000009
ORF1ab/nsp1318A18delGCT---11B.1.258.160.001637
ORF1ab/nsp1318A18delGCT---11B.1.416.10.001563
ORF1ab/nsp1318A18delGCT---11B.1.4530.003236
ORF1ab/nsp1318A18delGCT---11B.1.5850.027778
ORF1ab/nsp1318A18delGCT---11B.1.5960.000087
ORF1ab/nsp1318A18delGCT---11C.170.055556
ORF1ab/nsp1318A18delGCT---11P.1.100.000269