CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = A140del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13140A140delA5464deldelGCT---141141116654-16656

Details of the mutation A140del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13140A140delGCT---141141All0.000027
ORF1ab/nsp13140A140delGCT---8686B.1.1.70.000077
ORF1ab/nsp13140A140delGCT---1616B.1.1770.000211
ORF1ab/nsp13140A140delGCT---55AD.20.001095
ORF1ab/nsp13140A140delGCT---440.222222
ORF1ab/nsp13140A140delGCT---44AZ.20.003284
ORF1ab/nsp13140A140delGCT---44B.1.10.000073
ORF1ab/nsp13140A140delGCT---33B.10.000027
ORF1ab/nsp13140A140delGCT---22B.1.1.3060.000877
ORF1ab/nsp13140A140delGCT---22B.1.1.3150.016949
ORF1ab/nsp13140A140delGCT---22Q.10.000253
ORF1ab/nsp13140A140delGCT---11AY.240.000431
ORF1ab/nsp13140A140delGCT---11AY.40.000002
ORF1ab/nsp13140A140delGCT---11AY.430.000004
ORF1ab/nsp13140A140delGCT---11B.1.1.2310.003096
ORF1ab/nsp13140A140delGCT---11B.1.1.3050.003861
ORF1ab/nsp13140A140delGCT---11B.1.1.440.00241
ORF1ab/nsp13140A140delGCT---11B.1.1.510.001718
ORF1ab/nsp13140A140delGCT---11B.1.160.230.004831
ORF1ab/nsp13140A140delGCT---11B.1.177.730.000566
ORF1ab/nsp13140A140delGCT---11B.1.177.830.001481
ORF1ab/nsp13140A140delGCT---11B.1.2420.018868
ORF1ab/nsp13140A140delGCT---11B.1.360.000146
ORF1ab/nsp13140A140delGCT---11B.1.617.10.000129