CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = A140T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13140A140TA5464TnonsynGctAct39380.97435916654-16656
ORF1ab/nsp13140A140TA5464TnonsynGcTAcC3910.02564116654-16656

Details of the mutation A140T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13140A140TGctAct3839All0.000007
ORF1ab/nsp13140A140TGcTAcC139All0
ORF1ab/nsp13140A140TGctAct1010P.1.170.001618
ORF1ab/nsp13140A140TGctAct66B.1.1.70.000005
ORF1ab/nsp13140A140TGctAct66B.1.1600.000187
ORF1ab/nsp13140A140TGctAct33B.10.000027
ORF1ab/nsp13140A140TGctAct22AY.670.000929
ORF1ab/nsp13140A140TGcTAcC12B.1.90.006173
ORF1ab/nsp13140A140TGctAct12B.1.90.006173
ORF1ab/nsp13140A140TGctAct110.055556
ORF1ab/nsp13140A140TGctAct11AY.40.000002
ORF1ab/nsp13140A140TGctAct11AY.690.000187
ORF1ab/nsp13140A140TGctAct11B.1.10.000018
ORF1ab/nsp13140A140TGctAct11B.1.1.3560.008547
ORF1ab/nsp13140A140TGctAct11B.1.1.390.00051
ORF1ab/nsp13140A140TGctAct11B.1.3910.001127
ORF1ab/nsp13140A140TGctAct11B.1.5090.000866
ORF1ab/nsp13140A140TGctAct11B.1.617.20.000004
ORF1ab/nsp13140A140TGctAct11P.10.000016