CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 88 & Codon = cGa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1388Q88RQ5412RnonsyncAacGa2828116498-16500

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1388Q88RcAacGa2828All0.000005
ORF1ab/nsp1388Q88RcAacGa66AY.40.000009
ORF1ab/nsp1388Q88RcAacGa55AY.430.000022
ORF1ab/nsp1388Q88RcAacGa33AY.250.000018
ORF1ab/nsp1388Q88RcAacGa22B.10.000018
ORF1ab/nsp1388Q88RcAacGa22B.1.617.20.000008
ORF1ab/nsp1388Q88RcAacGa11AY.200.000039
ORF1ab/nsp1388Q88RcAacGa11AY.220.002092
ORF1ab/nsp1388Q88RcAacGa11AY.270.000065
ORF1ab/nsp1388Q88RcAacGa11AY.290.000016
ORF1ab/nsp1388Q88RcAacGa11AY.390.000025
ORF1ab/nsp1388Q88RcAacGa11AY.440.000006
ORF1ab/nsp1388Q88RcAacGa11B.1.1.4160.000905
ORF1ab/nsp1388Q88RcAacGa11B.1.1.70.000001
ORF1ab/nsp1388Q88RcAacGa11B.1.177.200.001517
ORF1ab/nsp1388Q88RcAacGa11D.20.000075