CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 77 & Codon = cTa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1377P77LP5401LnonsyncCacTa273821727376050.99977616465-16467

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1377P77LcCacTa27376052738217All0.523599
ORF1ab/nsp1377P77LcCacTa641807641822AY.40.998923
ORF1ab/nsp1377P77LcCacTa255260255598B.1.617.20.96116
ORF1ab/nsp1377P77LcCacTa224587224606AY.430.995025
ORF1ab/nsp1377P77LcCacTa165809165821AY.250.997311
ORF1ab/nsp1377P77LcCacTa163348163358AY.440.99426
ORF1ab/nsp1377P77LcCacTa160378160447AY.1030.995796
ORF1ab/nsp1377P77LcCacTa100222100259AY.30.996847
ORF1ab/nsp1377P77LcCacTa6338363383AY.290.999779
ORF1ab/nsp1377P77LcCacTa4837348374AY.50.998864
ORF1ab/nsp1377P77LcCacTa4608846105AY.4.20.999588
ORF1ab/nsp1377P77LcCacTa4008640101AY.390.990585
ORF1ab/nsp1377P77LcCacTa3768937690AY.1020.999284
ORF1ab/nsp1377P77LcCacTa3522735228AY.260.997282
ORF1ab/nsp1377P77LcCacTa3204632046AY.470.996796
ORF1ab/nsp1377P77LcCacTa2820728209AY.1190.99594
ORF1ab/nsp1377P77LcCacTa2717527177AY.9.20.998127
ORF1ab/nsp1377P77LcCacTa2687226873AY.1200.999071
ORF1ab/nsp1377P77LcCacTa2559525595AY.200.994753
ORF1ab/nsp1377P77LcCacTa2521425215AY.39.10.998812
ORF1ab/nsp1377P77LcCacTa2476624768AY.420.996339
ORF1ab/nsp1377P77LcCacTa2430924309AY.60.999794
ORF1ab/nsp1377P77LcCacTa2164921649AY.1000.995997
ORF1ab/nsp1377P77LcCacTa2028620292AY.98.10.982468
ORF1ab/nsp1377P77LcCacTa1777217773AY.750.99563
ORF1ab/nsp1377P77LcCacTa1590315904AY.1180.996304
ORF1ab/nsp1377P77LcCacTa1543115431AY.270.998706
ORF1ab/nsp1377P77LcCacTa1492314924AY.330.996528
ORF1ab/nsp1377P77LcCacTa1479314793AY.90.999932
ORF1ab/nsp1377P77LcCacTa1409814099AY.230.98333
ORF1ab/nsp1377P77LcCacTa1379813801AY.46.60.996317
ORF1ab/nsp1377P77LcCacTa1257712578AY.980.993522
ORF1ab/nsp1377P77LcCacTa1193411935AY.9.10.999163
ORF1ab/nsp1377P77LcCacTa1179511795AY.1170.996873
ORF1ab/nsp1377P77LcCacTa1171211713AY.3.10.998551
ORF1ab/nsp1377P77LcCacTa1131311313AY.140.995687
ORF1ab/nsp1377P77LcCacTa1079910800AY.99.20.995208
ORF1ab/nsp1377P77LcCacTa1040410404AY.540.991991
ORF1ab/nsp1377P77LcCacTa1030010301AY.340.998739
ORF1ab/nsp1377P77LcCacTa95409540AY.460.992923
ORF1ab/nsp1377P77LcCacTa95269526AY.610.998114
ORF1ab/nsp1377P77LcCacTa92839287AY.4.50.99785
ORF1ab/nsp1377P77LcCacTa88688868AY.7.10.999436
ORF1ab/nsp1377P77LcCacTa88508850AY.1100.997295
ORF1ab/nsp1377P77LcCacTa86318631AY.740.99815
ORF1ab/nsp1377P77LcCacTa81238123AY.450.98844
ORF1ab/nsp1377P77LcCacTa73147342AY.1210.989716
ORF1ab/nsp1377P77LcCacTa69896990AY.1130.995159
ORF1ab/nsp1377P77LcCacTa67326733AY.360.997777
ORF1ab/nsp1377P77LcCacTa67086708AY.4.2.10.999404
ORF1ab/nsp1377P77LcCacTa60716071AY.46.40.998684
ORF1ab/nsp1377P77LcCacTa59715971AY.130.961204
ORF1ab/nsp1377P77LcCacTa55115513AY.75.10.993689
ORF1ab/nsp1377P77LcCacTa54545454AY.1110.998901
ORF1ab/nsp1377P77LcCacTa53555355AY.690.999627
ORF1ab/nsp1377P77LcCacTa51025102AY.71
ORF1ab/nsp1377P77LcCacTa50405040AY.46.51
ORF1ab/nsp1377P77LcCacTa47874787AY.700.998123
ORF1ab/nsp1377P77LcCacTa45354535AY.29.11
ORF1ab/nsp1377P77LcCacTa43144314AY.1140.996996
ORF1ab/nsp1377P77LcCacTa36503650AY.930.996723
ORF1ab/nsp1377P77LcCacTa35913591AY.5.40.993636
ORF1ab/nsp1377P77LcCacTa34893489AY.680.955105
ORF1ab/nsp1377P77LcCacTa34693469AY.530.997412
ORF1ab/nsp1377P77LcCacTa34443444AY.1160.987668
ORF1ab/nsp1377P77LcCacTa33943400AY.410.997648
ORF1ab/nsp1377P77LcCacTa31963196AY.116.10.995329
ORF1ab/nsp1377P77LcCacTa31713171AY.920.910945
ORF1ab/nsp1377P77LcCacTa31183118AY.370.985461
ORF1ab/nsp1377P77LcCacTa31123112AY.120.10.999037
ORF1ab/nsp1377P77LcCacTa30853085AY.120.975032
ORF1ab/nsp1377P77LcCacTa29772977AY.1060.996986
ORF1ab/nsp1377P77LcCacTa29512952AY.5.30.995614
ORF1ab/nsp1377P77LcCacTa28122812B.1.6280.990839
ORF1ab/nsp1377P77LcCacTa27992799AY.20.996795
ORF1ab/nsp1377P77LcCacTa25832583AY.630.999226
ORF1ab/nsp1377P77LcCacTa25682568AY.160.974943
ORF1ab/nsp1377P77LcCacTa25202520AY.10.99723
ORF1ab/nsp1377P77LcCacTa25142514AY.300.994856
ORF1ab/nsp1377P77LcCacTa24422442AY.4.40.999182
ORF1ab/nsp1377P77LcCacTa23952395AY.23.10.999583
ORF1ab/nsp1377P77LcCacTa23342334AY.850.99701
ORF1ab/nsp1377P77LcCacTa23082308AY.240.994828
ORF1ab/nsp1377P77LcCacTa22762277AY.840.995626
ORF1ab/nsp1377P77LcCacTa22742274AY.620.99085
ORF1ab/nsp1377P77LcCacTa22572257AY.940.999115
ORF1ab/nsp1377P77LcCacTa21462146AY.1071
ORF1ab/nsp1377P77LcCacTa21442144AY.670.995357
ORF1ab/nsp1377P77LcCacTa20952095AY.710.995249
ORF1ab/nsp1377P77LcCacTa20332033AY.1010.997057
ORF1ab/nsp1377P77LcCacTa20072007AY.120.2.11
ORF1ab/nsp1377P77LcCacTa19731975AY.380.985022
ORF1ab/nsp1377P77LcCacTa19611961A.2.50.978543
ORF1ab/nsp1377P77LcCacTa19431943AY.34.10.990821
ORF1ab/nsp1377P77LcCacTa18831883AY.100.99788
ORF1ab/nsp1377P77LcCacTa18761876AY.651
ORF1ab/nsp1377P77LcCacTa18731873AY.320.997338
ORF1ab/nsp1377P77LcCacTa18111811AY.590.959216
ORF1ab/nsp1377P77LcCacTa17821783AY.7.20.996644
ORF1ab/nsp1377P77LcCacTa16671668AY.640.992262
ORF1ab/nsp1377P77LcCacTa16501650AY.81
ORF1ab/nsp1377P77LcCacTa15651565AY.46.20.994282
ORF1ab/nsp1377P77LcCacTa15531553AY.1050.998714
ORF1ab/nsp1377P77LcCacTa15231524AY.570.999344
ORF1ab/nsp1377P77LcCacTa15031503AY.731
ORF1ab/nsp1377P77LcCacTa14701470AY.16.10.690789
ORF1ab/nsp1377P77LcCacTa14611461AY.901
ORF1ab/nsp1377P77LcCacTa13961396B.10.012787
ORF1ab/nsp1377P77LcCacTa13801380AY.39.1.11
ORF1ab/nsp1377P77LcCacTa13631363AY.910.995617
ORF1ab/nsp1377P77LcCacTa13561356AY.4.11
ORF1ab/nsp1377P77LcCacTa13471347AY.1090.996302
ORF1ab/nsp1377P77LcCacTa12881288AY.950.980213
ORF1ab/nsp1377P77LcCacTa12501250AY.500.999201
ORF1ab/nsp1377P77LcCacTa12021202AY.860.99751
ORF1ab/nsp1377P77LcCacTa11941194AY.870.994172
ORF1ab/nsp1377P77LcCacTa11851185AY.4.30.997475
ORF1ab/nsp1377P77LcCacTa11241124AY.880.993811
ORF1ab/nsp1377P77LcCacTa10981098AY.580.99637
ORF1ab/nsp1377P77LcCacTa10961096AY.510.996364
ORF1ab/nsp1377P77LcCacTa10721072AY.550.983486
ORF1ab/nsp1377P77LcCacTa10671067AY.46.30.996265
ORF1ab/nsp1377P77LcCacTa10641064AY.600.998124
ORF1ab/nsp1377P77LcCacTa10341034AY.400.997107
ORF1ab/nsp1377P77LcCacTa10011001AY.520.815147
ORF1ab/nsp1377P77LcCacTa965965AY.46.10.99076
ORF1ab/nsp1377P77LcCacTa948948AY.990.994753
ORF1ab/nsp1377P77LcCacTa895895AY.660.957219
ORF1ab/nsp1377P77LcCacTa886886AY.801
ORF1ab/nsp1377P77LcCacTa878878AY.770.989853
ORF1ab/nsp1377P77LcCacTa834834AY.190.950969
ORF1ab/nsp1377P77LcCacTa826826AY.791
ORF1ab/nsp1377P77LcCacTa770770AY.120.20.989717
ORF1ab/nsp1377P77LcCacTa762762AY.1080.840132
ORF1ab/nsp1377P77LcCacTa745745AY.110.997323
ORF1ab/nsp1377P77LcCacTa734734AY.720.998639
ORF1ab/nsp1377P77LcCacTa734734AY.820.995929
ORF1ab/nsp1377P77LcCacTa649649AY.39.21
ORF1ab/nsp1377P77LcCacTa643643AY.99.10.998447
ORF1ab/nsp1377P77LcCacTa632632AY.780.973806
ORF1ab/nsp1377P77LcCacTa624624B.1.1.5230.975
ORF1ab/nsp1377P77LcCacTa618618A.2.5.20.971698
ORF1ab/nsp1377P77LcCacTa614614AY.560.985554
ORF1ab/nsp1377P77LcCacTa593593A.270.981788
ORF1ab/nsp1377P77LcCacTa587587AY.970.998299
ORF1ab/nsp1377P77LcCacTa580580AY.831
ORF1ab/nsp1377P77LcCacTa532532B.1.1600.016592
ORF1ab/nsp1377P77LcCacTa526526AY.280.994329
ORF1ab/nsp1377P77LcCacTa525525AY.210.996205
ORF1ab/nsp1377P77LcCacTa506506AY.9.2.11
ORF1ab/nsp1377P77LcCacTa501501AY.810.998008
ORF1ab/nsp1377P77LcCacTa500500AY.1040.992063
ORF1ab/nsp1377P77LcCacTa477477AY.960.989627
ORF1ab/nsp1377P77LcCacTa472472AY.220.987448
ORF1ab/nsp1377P77LcCacTa450450AY.151
ORF1ab/nsp1377P77LcCacTa406406AY.5.21
ORF1ab/nsp1377P77LcCacTa384384AY.480.178605
ORF1ab/nsp1377P77LcCacTa342342B0.043712
ORF1ab/nsp1377P77LcCacTa313313AY.491
ORF1ab/nsp1377P77LcCacTa287287B.1.6340.982877
ORF1ab/nsp1377P77LcCacTa266266AY.5.11
ORF1ab/nsp1377P77LcCacTa246246AY.91.11
ORF1ab/nsp1377P77LcCacTa207207A.2.5.10.995192
ORF1ab/nsp1377P77LcCacTa207207AY.761
ORF1ab/nsp1377P77LcCacTa204204AY.891
ORF1ab/nsp1377P77LcCacTa192192AY.1151
ORF1ab/nsp1377P77LcCacTa136136B.1.10.002467
ORF1ab/nsp1377P77LcCacTa122122AY.171
ORF1ab/nsp1377P77LcCacTa9898AY.180.989899
ORF1ab/nsp1377P77LcCacTa9696AY.350.022372
ORF1ab/nsp1377P77LcCacTa9494B.1.6031
ORF1ab/nsp1377P77LcCacTa9292A.2.5.30.948454
ORF1ab/nsp1377P77LcCacTa6868B.1.1.70.000061
ORF1ab/nsp1377P77LcCacTa5757B.1.6040.982759
ORF1ab/nsp1377P77LcCacTa5454AY.311
ORF1ab/nsp1377P77LcCacTa4343A0.016641
ORF1ab/nsp1377P77LcCacTa4040B.1.20.000352
ORF1ab/nsp1377P77LcCacTa4040B.1.5960.003486
ORF1ab/nsp1377P77LcCacTa3636C.401
ORF1ab/nsp1377P77LcCacTa3535B.1.1770.000461
ORF1ab/nsp1377P77LcCacTa3030B.1.617.10.003869
ORF1ab/nsp1377P77LcCacTa2526D.20.001876
ORF1ab/nsp1377P77LcCacTa2626P.10.00041
ORF1ab/nsp1377P77LcCacTa2525A.20.016545
ORF1ab/nsp1377P77LcCacTa2525B.1.2140.091575
ORF1ab/nsp1377P77LcCacTa1919B.1.2320.01021
ORF1ab/nsp1377P77LcCacTa1818B.1.177.730.010193
ORF1ab/nsp1377P77LcCacTa1616B.1.1.2690.021651
ORF1ab/nsp1377P77LcCacTa1515B.1.2390.018315
ORF1ab/nsp1377P77LcCacTa1414B.1.177.600.003058
ORF1ab/nsp1377P77LcCacTa1212B.1.2430.000835
ORF1ab/nsp1377P77LcCacTa1212B.30.009967
ORF1ab/nsp1377P77LcCacTa1212P.1.120.005808
ORF1ab/nsp1377P77LcCacTa1111B.1.1.280.003424
ORF1ab/nsp1377P77LcCacTa1111B.1.1.5260.039007
ORF1ab/nsp1377P77LcCacTa1111B.1.3750.009016
ORF1ab/nsp1377P77LcCacTa1010B.1.5090.008658
ORF1ab/nsp1377P77LcCacTa1010B.1.6230.005365
ORF1ab/nsp1377P77LcCacTa1010B.3.10.016584
ORF1ab/nsp1377P77LcCacTa99A.10.002537
ORF1ab/nsp1377P77LcCacTa99A.50.017308
ORF1ab/nsp1377P77LcCacTa99B.1.1.2320.016334
ORF1ab/nsp1377P77LcCacTa99B.1.6320.060403
ORF1ab/nsp1377P77LcCacTa88B.1.1570.023881
ORF1ab/nsp1377P77LcCacTa88B.1.6090.003835
ORF1ab/nsp1377P77LcCacTa88B.400.002914
ORF1ab/nsp1377P77LcCacTa88B.520.080808
ORF1ab/nsp1377P77LcCacTa77B.1.1.2940.008861
ORF1ab/nsp1377P77LcCacTa77B.1.1310.061404
ORF1ab/nsp1377P77LcCacTa77B.1.258.170.000728
ORF1ab/nsp1377P77LcCacTa77B.1.3350.072165
ORF1ab/nsp1377P77LcCacTa77B.1.3510.000208
ORF1ab/nsp1377P77LcCacTa77B.1.6210.00062
ORF1ab/nsp1377P77LcCacTa77B.550.020649
ORF1ab/nsp1377P77LcCacTa77P.1.10.002224
ORF1ab/nsp1377P77LcCacTa77P.1.170.001132
ORF1ab/nsp1377P77LcCacTa66B.1.1.5190.000238
ORF1ab/nsp1377P77LcCacTa66B.1.130.014252
ORF1ab/nsp1377P77LcCacTa66B.1.177.500.028169
ORF1ab/nsp1377P77LcCacTa66B.1.2210.000426
ORF1ab/nsp1377P77LcCacTa66B.1.5760.00544
ORF1ab/nsp1377P77LcCacTa55B.1.2580.000333
ORF1ab/nsp1377P77LcCacTa55B.1.3370.027933
ORF1ab/nsp1377P77LcCacTa55B.1.4040.00651
ORF1ab/nsp1377P77LcCacTa55B.1.4740.009506
ORF1ab/nsp1377P77LcCacTa440.222222
ORF1ab/nsp1377P77LcCacTa44B.1.1.3170.001647
ORF1ab/nsp1377P77LcCacTa44B.1.1.4320.005063
ORF1ab/nsp1377P77LcCacTa44B.1.4290.000094
ORF1ab/nsp1377P77LcCacTa44B.230.011696
ORF1ab/nsp1377P77LcCacTa44P.20.000747
ORF1ab/nsp1377P77LcCacTa44Q.40.001819
ORF1ab/nsp1377P77LcCacTa33A.290.015957
ORF1ab/nsp1377P77LcCacTa33AU.20.007264
ORF1ab/nsp1377P77LcCacTa33B.1.1.1700.003741
ORF1ab/nsp1377P77LcCacTa33B.1.1.3260.005282
ORF1ab/nsp1377P77LcCacTa33B.1.1.4120.022901
ORF1ab/nsp1377P77LcCacTa33B.1.177.800.005736
ORF1ab/nsp1377P77LcCacTa33B.1.3490.002144
ORF1ab/nsp1377P77LcCacTa33B.1.4270.000151
ORF1ab/nsp1377P77LcCacTa33B.1.5800.012195
ORF1ab/nsp1377P77LcCacTa33B.1.6270.006061
ORF1ab/nsp1377P77LcCacTa33B.1.6290.04
ORF1ab/nsp1377P77LcCacTa33B.60.00273
ORF1ab/nsp1377P77LcCacTa33C.370.000348
ORF1ab/nsp1377P77LcCacTa22AU.30.004219
ORF1ab/nsp1377P77LcCacTa22B.1.1.1210.004854
ORF1ab/nsp1377P77LcCacTa22B.1.1.1610.007067
ORF1ab/nsp1377P77LcCacTa22B.1.1.2200.003717
ORF1ab/nsp1377P77LcCacTa22B.1.1.2670.020202
ORF1ab/nsp1377P77LcCacTa22B.1.1.4590.030769
ORF1ab/nsp1377P77LcCacTa22B.1.1.500.001358
ORF1ab/nsp1377P77LcCacTa22B.1.1390.001466
ORF1ab/nsp1377P77LcCacTa22B.1.1430.042553
ORF1ab/nsp1377P77LcCacTa22B.1.160.280.005848
ORF1ab/nsp1377P77LcCacTa22B.1.177.210.000153
ORF1ab/nsp1377P77LcCacTa22B.1.177.520.003515
ORF1ab/nsp1377P77LcCacTa22B.1.177.550.004662
ORF1ab/nsp1377P77LcCacTa22B.1.177.750.002081
ORF1ab/nsp1377P77LcCacTa22B.1.177.860.000367
ORF1ab/nsp1377P77LcCacTa22B.1.2340.000264
ORF1ab/nsp1377P77LcCacTa22B.1.3140.015038
ORF1ab/nsp1377P77LcCacTa22B.1.3200.002491
ORF1ab/nsp1377P77LcCacTa22B.1.3550.022222
ORF1ab/nsp1377P77LcCacTa22B.1.360.000292
ORF1ab/nsp1377P77LcCacTa22B.1.3670.001585
ORF1ab/nsp1377P77LcCacTa22B.1.3690.00057
ORF1ab/nsp1377P77LcCacTa22B.1.3960.001411
ORF1ab/nsp1377P77LcCacTa22B.1.4220.001625
ORF1ab/nsp1377P77LcCacTa22B.1.4320.022472
ORF1ab/nsp1377P77LcCacTa22B.1.4650.007605
ORF1ab/nsp1377P77LcCacTa22B.1.466.20.000782
ORF1ab/nsp1377P77LcCacTa22B.1.5060.047619
ORF1ab/nsp1377P77LcCacTa22B.1.5300.014286
ORF1ab/nsp1377P77LcCacTa22B.1.5810.018868
ORF1ab/nsp1377P77LcCacTa12B.1.617.30.002985
ORF1ab/nsp1377P77LcCacTa22B.40.004415
ORF1ab/nsp1377P77LcCacTa22C.160.002121
ORF1ab/nsp1377P77LcCacTa22C.36.3.10.005435
ORF1ab/nsp1377P77LcCacTa22C.37.10.005236
ORF1ab/nsp1377P77LcCacTa22P.1.70.000639
ORF1ab/nsp1377P77LcCacTa11A.120.166667
ORF1ab/nsp1377P77LcCacTa11A.2.20.001689
ORF1ab/nsp1377P77LcCacTa11A.2.40.003367
ORF1ab/nsp1377P77LcCacTa11A.210.00277
ORF1ab/nsp1377P77LcCacTa11A.300.142857
ORF1ab/nsp1377P77LcCacTa11AA.10.007246
ORF1ab/nsp1377P77LcCacTa11AT.10.005128
ORF1ab/nsp1377P77LcCacTa11B.1.1.10.000327
ORF1ab/nsp1377P77LcCacTa11B.1.1.1170.009709
ORF1ab/nsp1377P77LcCacTa11B.1.1.1890.001513
ORF1ab/nsp1377P77LcCacTa11B.1.1.2000.007463
ORF1ab/nsp1377P77LcCacTa11B.1.1.2140.000055
ORF1ab/nsp1377P77LcCacTa11B.1.1.250.000569
ORF1ab/nsp1377P77LcCacTa11B.1.1.2540.011236
ORF1ab/nsp1377P77LcCacTa11B.1.1.2650.003155
ORF1ab/nsp1377P77LcCacTa11B.1.1.2770.000759
ORF1ab/nsp1377P77LcCacTa11B.1.1.2890.002083
ORF1ab/nsp1377P77LcCacTa11B.1.1.3220.008772
ORF1ab/nsp1377P77LcCacTa11B.1.1.3560.008547
ORF1ab/nsp1377P77LcCacTa11B.1.1.3750.011905
ORF1ab/nsp1377P77LcCacTa11B.1.1.390.00051
ORF1ab/nsp1377P77LcCacTa11B.1.1.3960.045455
ORF1ab/nsp1377P77LcCacTa11B.1.1.4080.027778
ORF1ab/nsp1377P77LcCacTa11B.1.1.4090.002833
ORF1ab/nsp1377P77LcCacTa11B.1.1.410.006329
ORF1ab/nsp1377P77LcCacTa11B.1.1.4190.007407
ORF1ab/nsp1377P77LcCacTa11B.1.1.440.00241
ORF1ab/nsp1377P77LcCacTa11B.1.1.5120.028571
ORF1ab/nsp1377P77LcCacTa11B.1.1.5250.005464
ORF1ab/nsp1377P77LcCacTa11B.1.1.5280.004808
ORF1ab/nsp1377P77LcCacTa11B.1.1.630.000386
ORF1ab/nsp1377P77LcCacTa11B.1.1110.001175
ORF1ab/nsp1377P77LcCacTa11B.1.1190.010526
ORF1ab/nsp1377P77LcCacTa11B.1.1260.001276
ORF1ab/nsp1377P77LcCacTa11B.1.1420.002899
ORF1ab/nsp1377P77LcCacTa11B.1.1580.02381
ORF1ab/nsp1377P77LcCacTa11B.1.160.140.002119
ORF1ab/nsp1377P77LcCacTa11B.1.160.260.002421
ORF1ab/nsp1377P77LcCacTa11B.1.160.330.004425
ORF1ab/nsp1377P77LcCacTa11B.1.160.70.002079
ORF1ab/nsp1377P77LcCacTa11B.1.177.100.000878
ORF1ab/nsp1377P77LcCacTa11B.1.177.330.001645
ORF1ab/nsp1377P77LcCacTa11B.1.177.570.000281
ORF1ab/nsp1377P77LcCacTa11B.1.177.630.002703
ORF1ab/nsp1377P77LcCacTa11B.1.177.760.002494
ORF1ab/nsp1377P77LcCacTa11B.1.177.810.000189
ORF1ab/nsp1377P77LcCacTa11B.1.1790.003759
ORF1ab/nsp1377P77LcCacTa11B.1.1900.01
ORF1ab/nsp1377P77LcCacTa11B.1.2180.005155
ORF1ab/nsp1377P77LcCacTa11B.1.2230.002778
ORF1ab/nsp1377P77LcCacTa11B.1.2250.015385
ORF1ab/nsp1377P77LcCacTa11B.1.2470.014925
ORF1ab/nsp1377P77LcCacTa11B.1.258.240.010753
ORF1ab/nsp1377P77LcCacTa11B.1.3010.005917
ORF1ab/nsp1377P77LcCacTa11B.1.3190.003049
ORF1ab/nsp1377P77LcCacTa11B.1.3250.006897
ORF1ab/nsp1377P77LcCacTa11B.1.3360.002439
ORF1ab/nsp1377P77LcCacTa11B.1.3400.004292
ORF1ab/nsp1377P77LcCacTa11B.1.351.30.000876
ORF1ab/nsp1377P77LcCacTa11B.1.36.100.004785
ORF1ab/nsp1377P77LcCacTa11B.1.36.180.00042
ORF1ab/nsp1377P77LcCacTa11B.1.36.290.000517
ORF1ab/nsp1377P77LcCacTa11B.1.36.380.001642
ORF1ab/nsp1377P77LcCacTa11B.1.3620.001541
ORF1ab/nsp1377P77LcCacTa11B.1.3710.001122
ORF1ab/nsp1377P77LcCacTa11B.1.3850.010638
ORF1ab/nsp1377P77LcCacTa11B.1.3970.004854
ORF1ab/nsp1377P77LcCacTa11B.1.4260.001009
ORF1ab/nsp1377P77LcCacTa11B.1.4280.00102
ORF1ab/nsp1377P77LcCacTa11B.1.4330.003195
ORF1ab/nsp1377P77LcCacTa11B.1.4460.02
ORF1ab/nsp1377P77LcCacTa11B.1.4620.007246
ORF1ab/nsp1377P77LcCacTa11B.1.4680.005714
ORF1ab/nsp1377P77LcCacTa11B.1.4690.00361
ORF1ab/nsp1377P77LcCacTa11B.1.4970.000315
ORF1ab/nsp1377P77LcCacTa11B.1.5030.002488
ORF1ab/nsp1377P77LcCacTa11B.1.5170.000427
ORF1ab/nsp1377P77LcCacTa11B.1.5250.000113
ORF1ab/nsp1377P77LcCacTa11B.1.5260.000024
ORF1ab/nsp1377P77LcCacTa11B.1.5500.013699
ORF1ab/nsp1377P77LcCacTa11B.1.5510.00129
ORF1ab/nsp1377P77LcCacTa11B.1.5540.004405
ORF1ab/nsp1377P77LcCacTa11B.1.5640.000426
ORF1ab/nsp1377P77LcCacTa11B.1.5860.010989
ORF1ab/nsp1377P77LcCacTa11B.1.5990.00365
ORF1ab/nsp1377P77LcCacTa11B.1.6020.006536
ORF1ab/nsp1377P77LcCacTa11B.1.6190.000871
ORF1ab/nsp1377P77LcCacTa11B.1.619.10.000641
ORF1ab/nsp1377P77LcCacTa11B.1.6250.002353
ORF1ab/nsp1377P77LcCacTa11B.1.6310.003367
ORF1ab/nsp1377P77LcCacTa11B.1.6370.000073
ORF1ab/nsp1377P77LcCacTa11B.1.700.02439
ORF1ab/nsp1377P77LcCacTa11B.1.810.021277
ORF1ab/nsp1377P77LcCacTa11B.110.005128
ORF1ab/nsp1377P77LcCacTa11B.280.003279
ORF1ab/nsp1377P77LcCacTa11B.290.003509
ORF1ab/nsp1377P77LcCacTa11B.310.003731
ORF1ab/nsp1377P77LcCacTa11B.390.002331
ORF1ab/nsp1377P77LcCacTa11B.450.003831
ORF1ab/nsp1377P77LcCacTa11C.330.058824
ORF1ab/nsp1377P77LcCacTa11C.36.30.000567
ORF1ab/nsp1377P77LcCacTa11D.30.005917
ORF1ab/nsp1377P77LcCacTa11P.1.130.000898
ORF1ab/nsp1377P77LcCacTa11P.1.140.000048
ORF1ab/nsp1377P77LcCacTa11P.70.004367
ORF1ab/nsp1377P77LcCacTa11Q.80.000165

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.