CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 77 & Codon = cTG

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1377P77LP5401LnonsyncCAcTG27382171170.000042728516465-16467

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1377P77LcCAcTG1172738217All0.000022
ORF1ab/nsp1377P77LcCAcTG25255598B.1.617.20.000094
ORF1ab/nsp1377P77LcCAcTG14224606AY.430.000062
ORF1ab/nsp1377P77LcCAcTG1165821AY.250.000006
ORF1ab/nsp1377P77LcCAcTG5163358AY.440.00003
ORF1ab/nsp1377P77LcCAcTG3160447AY.1030.000019
ORF1ab/nsp1377P77LcCAcTG3100259AY.30.00003
ORF1ab/nsp1377P77LcCAcTG1546105AY.4.20.000325
ORF1ab/nsp1377P77LcCAcTG127177AY.9.20.000037
ORF1ab/nsp1377P77LcCAcTG126873AY.1200.000037
ORF1ab/nsp1377P77LcCAcTG224768AY.420.00008
ORF1ab/nsp1377P77LcCAcTG420292AY.98.10.000194
ORF1ab/nsp1377P77LcCAcTG117773AY.750.000056
ORF1ab/nsp1377P77LcCAcTG114924AY.330.000067
ORF1ab/nsp1377P77LcCAcTG112578AY.980.000079
ORF1ab/nsp1377P77LcCAcTG111935AY.9.10.000084
ORF1ab/nsp1377P77LcCAcTG49287AY.4.50.00043
ORF1ab/nsp1377P77LcCAcTG287342AY.1210.003789
ORF1ab/nsp1377P77LcCAcTG16990AY.1130.000142
ORF1ab/nsp1377P77LcCAcTG16733AY.360.000148
ORF1ab/nsp1377P77LcCAcTG25513AY.75.10.000361
ORF1ab/nsp1377P77LcCAcTG12277AY.840.000437
ORF1ab/nsp1377P77LcCAcTG11783AY.7.20.000559
ORF1ab/nsp1377P77LcCAcTG12B.1.617.30.002985