CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 77 & Codon = TTa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1377P77LP5401LnonsynCCaTTa27382174940.00018040916465-16467

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1377P77LCCaTTa4942738217All0.000094
ORF1ab/nsp1377P77LCCaTTa15641822AY.40.000023
ORF1ab/nsp1377P77LCCaTTa313255598B.1.617.20.001179
ORF1ab/nsp1377P77LCCaTTa5224606AY.430.000022
ORF1ab/nsp1377P77LCCaTTa11165821AY.250.000066
ORF1ab/nsp1377P77LCCaTTa5163358AY.440.00003
ORF1ab/nsp1377P77LCCaTTa66160447AY.1030.00041
ORF1ab/nsp1377P77LCCaTTa34100259AY.30.000338
ORF1ab/nsp1377P77LCCaTTa148374AY.50.000021
ORF1ab/nsp1377P77LCCaTTa246105AY.4.20.000043
ORF1ab/nsp1377P77LCCaTTa1540101AY.390.000371
ORF1ab/nsp1377P77LCCaTTa137690AY.1020.000027
ORF1ab/nsp1377P77LCCaTTa135228AY.260.000028
ORF1ab/nsp1377P77LCCaTTa228209AY.1190.000071
ORF1ab/nsp1377P77LCCaTTa127177AY.9.20.000037
ORF1ab/nsp1377P77LCCaTTa125215AY.39.10.00004
ORF1ab/nsp1377P77LCCaTTa220292AY.98.10.000097
ORF1ab/nsp1377P77LCCaTTa115904AY.1180.000063
ORF1ab/nsp1377P77LCCaTTa114099AY.230.00007
ORF1ab/nsp1377P77LCCaTTa313801AY.46.60.000217
ORF1ab/nsp1377P77LCCaTTa111713AY.3.10.000085
ORF1ab/nsp1377P77LCCaTTa110800AY.99.20.000092
ORF1ab/nsp1377P77LCCaTTa110301AY.340.000097
ORF1ab/nsp1377P77LCCaTTa63400AY.410.001764
ORF1ab/nsp1377P77LCCaTTa12952AY.5.30.000337
ORF1ab/nsp1377P77LCCaTTa21975AY.380.000999
ORF1ab/nsp1377P77LCCaTTa11668AY.640.000595
ORF1ab/nsp1377P77LCCaTTa11524AY.570.000656