CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 74 & Codon = Cca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1374S74PS5398PnonsynTcaCca24632463116456-16458

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1374S74PTcaCca24632463All0.000471
ORF1ab/nsp1374S74PTcaCca910910B.1.1.1530.996714
ORF1ab/nsp1374S74PTcaCca648648B.1.1.70.00058
ORF1ab/nsp1374S74PTcaCca150150B.1.20.001321
ORF1ab/nsp1374S74PTcaCca149149B.10.001365
ORF1ab/nsp1374S74PTcaCca9696B.1.1.3170.039522
ORF1ab/nsp1374S74PTcaCca9595B.1.1.3710.989583
ORF1ab/nsp1374S74PTcaCca2323P.1.70.007344
ORF1ab/nsp1374S74PTcaCca2121B.1.1.4160.019005
ORF1ab/nsp1374S74PTcaCca1919B.1.5670.063333
ORF1ab/nsp1374S74PTcaCca1717AY.440.000103
ORF1ab/nsp1374S74PTcaCca1717B.1.4290.0004
ORF1ab/nsp1374S74PTcaCca1414AY.40.000022
ORF1ab/nsp1374S74PTcaCca1414P.10.000221
ORF1ab/nsp1374S74PTcaCca1212B.1.617.20.000045
ORF1ab/nsp1374S74PTcaCca1212B.1.6190.010453
ORF1ab/nsp1374S74PTcaCca1111AY.620.004793
ORF1ab/nsp1374S74PTcaCca1111B.1.10.0002
ORF1ab/nsp1374S74PTcaCca1111B.1.5400.106796
ORF1ab/nsp1374S74PTcaCca1111C.370.001277
ORF1ab/nsp1374S74PTcaCca1010B.1.1.2770.007587
ORF1ab/nsp1374S74PTcaCca1010B.1.2210.00071
ORF1ab/nsp1374S74PTcaCca99B.1.3360.021951
ORF1ab/nsp1374S74PTcaCca99B.1.3510.000268
ORF1ab/nsp1374S74PTcaCca99Q.80.001484
ORF1ab/nsp1374S74PTcaCca88Q.10.001011
ORF1ab/nsp1374S74PTcaCca77AY.260.000198
ORF1ab/nsp1374S74PTcaCca66AY.1030.000037
ORF1ab/nsp1374S74PTcaCca66AY.250.000036
ORF1ab/nsp1374S74PTcaCca66B.1.1.5190.000238
ORF1ab/nsp1374S74PTcaCca55B.1.6230.002682
ORF1ab/nsp1374S74PTcaCca55R.10.00045
ORF1ab/nsp1374S74PTcaCca44AT.10.020513
ORF1ab/nsp1374S74PTcaCca44B.1.1.280.001245
ORF1ab/nsp1374S74PTcaCca44B.1.360.000584
ORF1ab/nsp1374S74PTcaCca44B.1.5950.001044
ORF1ab/nsp1374S74PTcaCca44B.1.6210.000354
ORF1ab/nsp1374S74PTcaCca33A.190.028302
ORF1ab/nsp1374S74PTcaCca33AY.30.00003
ORF1ab/nsp1374S74PTcaCca33AY.390.000074
ORF1ab/nsp1374S74PTcaCca33AY.9.10.000251
ORF1ab/nsp1374S74PTcaCca33B.1.1.1920.006928
ORF1ab/nsp1374S74PTcaCca33B.1.1.2940.003797
ORF1ab/nsp1374S74PTcaCca33B.1.1.3060.001315
ORF1ab/nsp1374S74PTcaCca33B.1.1.3370.010791
ORF1ab/nsp1374S74PTcaCca33B.1.1770.00004
ORF1ab/nsp1374S74PTcaCca33B.1.221.20.012048
ORF1ab/nsp1374S74PTcaCca33B.1.258.140.002941
ORF1ab/nsp1374S74PTcaCca33B.1.4270.000151
ORF1ab/nsp1374S74PTcaCca22AY.1020.000053
ORF1ab/nsp1374S74PTcaCca22AY.120.2.10.000997
ORF1ab/nsp1374S74PTcaCca22AY.3.10.000171
ORF1ab/nsp1374S74PTcaCca22AY.50.000041
ORF1ab/nsp1374S74PTcaCca22AY.740.000231
ORF1ab/nsp1374S74PTcaCca22B.1.1.2690.002706
ORF1ab/nsp1374S74PTcaCca22B.1.1.5210.010695
ORF1ab/nsp1374S74PTcaCca22B.1.1260.002551
ORF1ab/nsp1374S74PTcaCca22B.1.177.120.000303
ORF1ab/nsp1374S74PTcaCca22B.1.2340.000264
ORF1ab/nsp1374S74PTcaCca22B.1.2580.000133
ORF1ab/nsp1374S74PTcaCca22B.1.36.170.000988
ORF1ab/nsp1374S74PTcaCca22B.1.36.290.001035
ORF1ab/nsp1374S74PTcaCca22B.1.466.20.000782
ORF1ab/nsp1374S74PTcaCca22B.1.5260.000047
ORF1ab/nsp1374S74PTcaCca22B.1.5960.000174
ORF1ab/nsp1374S74PTcaCca22B.1.6090.000959
ORF1ab/nsp1374S74PTcaCca11A0.000387
ORF1ab/nsp1374S74PTcaCca11A.23.10.000704
ORF1ab/nsp1374S74PTcaCca11AY.1180.000063
ORF1ab/nsp1374S74PTcaCca11AY.1190.000035
ORF1ab/nsp1374S74PTcaCca11AY.270.000065
ORF1ab/nsp1374S74PTcaCca11AY.430.000004
ORF1ab/nsp1374S74PTcaCca11AY.450.000122
ORF1ab/nsp1374S74PTcaCca11AY.460.000104
ORF1ab/nsp1374S74PTcaCca11AY.540.000095
ORF1ab/nsp1374S74PTcaCca11AY.750.000056
ORF1ab/nsp1374S74PTcaCca11AY.830.001724
ORF1ab/nsp1374S74PTcaCca11AY.90.000068
ORF1ab/nsp1374S74PTcaCca11AY.9.20.000037
ORF1ab/nsp1374S74PTcaCca11B0.000128
ORF1ab/nsp1374S74PTcaCca11B.1.1.2610.008621
ORF1ab/nsp1374S74PTcaCca11B.1.1.3070.002532
ORF1ab/nsp1374S74PTcaCca11B.1.1.3660.015873
ORF1ab/nsp1374S74PTcaCca11B.1.1.3690.000446
ORF1ab/nsp1374S74PTcaCca11B.1.1.3720.000689
ORF1ab/nsp1374S74PTcaCca11B.1.1.4480.002033
ORF1ab/nsp1374S74PTcaCca11B.1.1.4670.019231
ORF1ab/nsp1374S74PTcaCca11B.1.1600.000031
ORF1ab/nsp1374S74PTcaCca11B.1.177.160.000664
ORF1ab/nsp1374S74PTcaCca11B.1.177.400.005155
ORF1ab/nsp1374S74PTcaCca11B.1.177.570.000281
ORF1ab/nsp1374S74PTcaCca11B.1.177.730.000566
ORF1ab/nsp1374S74PTcaCca11B.1.177.810.000189
ORF1ab/nsp1374S74PTcaCca11B.1.177.860.000183
ORF1ab/nsp1374S74PTcaCca11B.1.2400.000216
ORF1ab/nsp1374S74PTcaCca11B.1.2430.00007
ORF1ab/nsp1374S74PTcaCca11B.1.36.70.004
ORF1ab/nsp1374S74PTcaCca11B.1.3670.000792
ORF1ab/nsp1374S74PTcaCca11B.1.3690.000285
ORF1ab/nsp1374S74PTcaCca11B.1.4680.005714
ORF1ab/nsp1374S74PTcaCca11B.1.4970.000315
ORF1ab/nsp1374S74PTcaCca11B.1.5250.000113
ORF1ab/nsp1374S74PTcaCca11B.1.5750.000303
ORF1ab/nsp1374S74PTcaCca11B.1.6370.000073
ORF1ab/nsp1374S74PTcaCca11B.290.003509
ORF1ab/nsp1374S74PTcaCca11D.20.000075
ORF1ab/nsp1374S74PTcaCca11N.100.029412
ORF1ab/nsp1374S74PTcaCca11P.1.150.000232