CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 584

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13584K584NK5908NnonsynaaGaaT8468450.99881817986-17988
ORF1ab/nsp13584K584NK5908NnonsynaaGaaC84610.0011820317986-17988
ORF1ab/nsp13584K584KK5908KsynaaGaaA220220117986-17988
ORF1ab/nsp13584K584EK5908EnonsynAagGag202202117986-17988
ORF1ab/nsp13584K584RK5908RnonsynaAgaGg1181170.99152517986-17988
ORF1ab/nsp13584K584RK5908RnonsynAAGCGA11810.0084745817986-17988
ORF1ab/nsp13584K584delK5908deldelAAG---2020117986-17988
ORF1ab/nsp13584K584TK5908TnonsynaAgaCg99117986-17988
ORF1ab/nsp13584K584QK5908QnonsynAagCag88117986-17988
ORF1ab/nsp13584K584MK5908MnonsynaAgaTg22117986-17988
ORF1ab/nsp13584K584DK5908DnonsynAaGGaC11117986-17988

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13584K584NaaGaaT845846All0.000162
ORF1ab/nsp13584K584NaaGaaC1846All0
ORF1ab/nsp13584K584NaaGaaT314314B.1.3510.009334
ORF1ab/nsp13584K584NaaGaaT234234AY.40.000364
ORF1ab/nsp13584K584KaaGaaA220220All0.000042
ORF1ab/nsp13584K584EAagGag202202All0.000039
ORF1ab/nsp13584K584RaAgaGg117118All0.000022
ORF1ab/nsp13584K584RAAGCGA1118All0
ORF1ab/nsp13584K584NaaGaaT6262B.1.428.30.794872
ORF1ab/nsp13584K584EAagGag4747AY.200.001827
ORF1ab/nsp13584K584NaaGaaT4545B.1.1.70.00004
ORF1ab/nsp13584K584NaaGaaT4444AY.680.012045
ORF1ab/nsp13584K584KaaGaaA4040C.36.30.022689
ORF1ab/nsp13584K584EAagGag3636B.1.1.70.000032
ORF1ab/nsp13584K584RaAgaGg3636B.1.617.10.004643
ORF1ab/nsp13584K584EAagGag2828B.1.177.600.006116
ORF1ab/nsp13584K584RaAgaGg2727B.1.177.860.004953
ORF1ab/nsp13584K584delAAG---2020All0.000004
ORF1ab/nsp13584K584KaaGaaA2020B.1.3980.059524
ORF1ab/nsp13584K584KaaGaaA1717AY.40.000026
ORF1ab/nsp13584K584RaAgaGg1717B.1.1.70.000015
ORF1ab/nsp13584K584KaaGaaA1616B.1.1.70.000014
ORF1ab/nsp13584K584EAagGag1414B.1.617.20.000053
ORF1ab/nsp13584K584NaaGaaT1313AY.30.000129
ORF1ab/nsp13584K584EAagGag1313AY.40.00002
ORF1ab/nsp13584K584EAagGag1313AY.430.000058
ORF1ab/nsp13584K584EAagGag1313B.1.1.3740.030879
ORF1ab/nsp13584K584NaaGaaT1212AY.430.000053
ORF1ab/nsp13584K584KaaGaaA1212AY.430.000053
ORF1ab/nsp13584K584EAagGag1111B.1.10.0002
ORF1ab/nsp13584K584RaAgaGg1111B.1.1.4040.174603
ORF1ab/nsp13584K584NaaGaaT1111B.1.5950.002871
ORF1ab/nsp13584K584NaaGaaT1111B.1.617.20.000041
ORF1ab/nsp13584K584NaaGaaT1111B.1.6210.000974
ORF1ab/nsp13584K584NaaGaaT1010B.10.000092
ORF1ab/nsp13584K584KaaGaaA1010B.1.360.001459
ORF1ab/nsp13584K584TaAgaCg99All0.000002
ORF1ab/nsp13584K584KaaGaaA99B.10.000082
ORF1ab/nsp13584K584delAAG---99B.1.1.70.000008
ORF1ab/nsp13584K584NaaGaaT99P.10.000142
ORF1ab/nsp13584K584QAagCag88All0.000002
ORF1ab/nsp13584K584NaaGaaT88B.1.10.000145
ORF1ab/nsp13584K584KaaGaaA88B.1.1770.000105
ORF1ab/nsp13584K584KaaGaaA88C.360.007286
ORF1ab/nsp13584K584KaaGaaA77AY.1160.002007
ORF1ab/nsp13584K584NaaGaaT77B.1.20.000062
ORF1ab/nsp13584K584EAagGag66AY.440.000037
ORF1ab/nsp13584K584TaAgaCg66B.1.1.70.000005
ORF1ab/nsp13584K584KaaGaaA66B.1.4290.000141
ORF1ab/nsp13584K584KaaGaaA66P.10.000095
ORF1ab/nsp13584K584KaaGaaA44AY.1000.000184
ORF1ab/nsp13584K584RaAgaGg44AY.250.000024
ORF1ab/nsp13584K584NaaGaaT44AY.260.000113
ORF1ab/nsp13584K584NaaGaaT44AY.360.000593
ORF1ab/nsp13584K584KaaGaaA44B.1.1600.000125
ORF1ab/nsp13584K584QAagCag44B.1.617.20.000015
ORF1ab/nsp13584K584KaaGaaA33AY.230.000209
ORF1ab/nsp13584K584EAagGag33AY.250.000018
ORF1ab/nsp13584K584NaaGaaT33AY.440.000018
ORF1ab/nsp13584K584KaaGaaA33AY.60.000123
ORF1ab/nsp13584K584NaaGaaT33B.1.1.120.022388
ORF1ab/nsp13584K584NaaGaaT33B.1.160.70.006237
ORF1ab/nsp13584K584KaaGaaA33B.1.20.000026
ORF1ab/nsp13584K584EAagGag33B.1.2580.0002
ORF1ab/nsp13584K584KaaGaaA33B.1.5260.000071
ORF1ab/nsp13584K584KaaGaaA33B.1.617.20.000011
ORF1ab/nsp13584K584RaAgaGg33B.1.617.20.000011
ORF1ab/nsp13584K584KaaGaaA33B.1.6370.000219
ORF1ab/nsp13584K584NaaGaaT33B.60.00273
ORF1ab/nsp13584K584KaaGaaA33P.1.120.001452
ORF1ab/nsp13584K584MaAgaTg22All0
ORF1ab/nsp13584K584EAagGag22AY.1180.000125
ORF1ab/nsp13584K584NaaGaaT22AY.1210.000271
ORF1ab/nsp13584K584KaaGaaA22AY.250.000012
ORF1ab/nsp13584K584NaaGaaT22AY.250.000012
ORF1ab/nsp13584K584KaaGaaA22AY.290.000032
ORF1ab/nsp13584K584NaaGaaT22AY.290.000032
ORF1ab/nsp13584K584RaAgaGg22AY.330.000134
ORF1ab/nsp13584K584RaAgaGg22AY.40.000003
ORF1ab/nsp13584K584NaaGaaT22AY.4.20.000043
ORF1ab/nsp13584K584NaaGaaT22AY.4.50.000215
ORF1ab/nsp13584K584KaaGaaA22AY.440.000012
ORF1ab/nsp13584K584EAagGag22AY.610.00021
ORF1ab/nsp13584K584KaaGaaA22B.1.10.000036
ORF1ab/nsp13584K584RaAgaGg22B.1.1.1530.002191
ORF1ab/nsp13584K584TaAgaCg22B.1.1.2140.000111
ORF1ab/nsp13584K584RaAgaGg22B.1.1.500.001358
ORF1ab/nsp13584K584NaaGaaT22B.1.1770.000026
ORF1ab/nsp13584K584NaaGaaT22B.1.177.570.000562
ORF1ab/nsp13584K584KaaGaaA22B.1.177.580.002663
ORF1ab/nsp13584K584EAagGag22B.1.20.000018
ORF1ab/nsp13584K584NaaGaaT22B.1.3460.002621
ORF1ab/nsp13584K584EAagGag22B.1.4360.002058
ORF1ab/nsp13584K584KaaGaaA22P.1.70.000639
ORF1ab/nsp13584K584DAaGGaC110.055556
ORF1ab/nsp13584K584NaaGaaC110.055556
ORF1ab/nsp13584K584EAagGag110.055556
ORF1ab/nsp13584K584KaaGaaA110.055556
ORF1ab/nsp13584K584KaaGaaA11A.2.40.003367
ORF1ab/nsp13584K584DAaGGaC11All0
ORF1ab/nsp13584K584NaaGaaT11AY.1000.000046
ORF1ab/nsp13584K584RaAgaGg11AY.1110.000183
ORF1ab/nsp13584K584KaaGaaA11AY.1180.000063
ORF1ab/nsp13584K584NaaGaaT11AY.1190.000035
ORF1ab/nsp13584K584NaaGaaT11AY.1200.000037
ORF1ab/nsp13584K584RaAgaGg11AY.1210.000135
ORF1ab/nsp13584K584RaAgaGg11AY.16.10.00047
ORF1ab/nsp13584K584NaaGaaT11AY.240.000431
ORF1ab/nsp13584K584QAagCag11AY.250.000006
ORF1ab/nsp13584K584delAAG---11AY.250.000006
ORF1ab/nsp13584K584QAagCag11AY.280.00189
ORF1ab/nsp13584K584KaaGaaA11AY.30.00001
ORF1ab/nsp13584K584QAagCag11AY.330.000067
ORF1ab/nsp13584K584KaaGaaA11AY.340.000097
ORF1ab/nsp13584K584NaaGaaT11AY.370.000316
ORF1ab/nsp13584K584RaAgaGg11AY.390.000025
ORF1ab/nsp13584K584NaaGaaT11AY.390.000025
ORF1ab/nsp13584K584NaaGaaT11AY.39.10.00004
ORF1ab/nsp13584K584RaAgaGg11AY.39.10.00004
ORF1ab/nsp13584K584delAAG---11AY.40.000002
ORF1ab/nsp13584K584EAagGag11AY.420.00004
ORF1ab/nsp13584K584delAAG---11AY.430.000004
ORF1ab/nsp13584K584EAagGag11AY.450.000122
ORF1ab/nsp13584K584delAAG---11AY.46.20.000635
ORF1ab/nsp13584K584KaaGaaA11AY.470.000031
ORF1ab/nsp13584K584NaaGaaT11AY.50.000021
ORF1ab/nsp13584K584NaaGaaT11AY.540.000095
ORF1ab/nsp13584K584KaaGaaA11AY.610.000105
ORF1ab/nsp13584K584NaaGaaT11AY.610.000105
ORF1ab/nsp13584K584KaaGaaA11AY.690.000187
ORF1ab/nsp13584K584NaaGaaT11AY.740.000116
ORF1ab/nsp13584K584delAAG---11AY.750.000056
ORF1ab/nsp13584K584RaAgaGg11AY.750.000056
ORF1ab/nsp13584K584NaaGaaT11AY.9.20.000037
ORF1ab/nsp13584K584QAagCag11AY.920.000287
ORF1ab/nsp13584K584NaaGaaT11AY.970.001701
ORF1ab/nsp13584K584MaAgaTg11AY.980.000079
ORF1ab/nsp13584K584KaaGaaA11AY.98.10.000048
ORF1ab/nsp13584K584delAAG---11AY.99.10.001553
ORF1ab/nsp13584K584RaAgaGg11B.10.000009
ORF1ab/nsp13584K584delAAG---11B.10.000009
ORF1ab/nsp13584K584RaAgaGg11B.1.10.000018
ORF1ab/nsp13584K584TaAgaCg11B.1.1.3060.000438
ORF1ab/nsp13584K584KaaGaaA11B.1.1.3150.008475
ORF1ab/nsp13584K584NaaGaaT11B.1.1600.000031
ORF1ab/nsp13584K584delAAG---11B.1.160.70.002079
ORF1ab/nsp13584K584KaaGaaA11B.1.177.120.000152
ORF1ab/nsp13584K584delAAG---11B.1.177.830.001481
ORF1ab/nsp13584K584KaaGaaA11B.1.2210.000071
ORF1ab/nsp13584K584KaaGaaA11B.1.2320.000537
ORF1ab/nsp13584K584MaAgaTg11B.1.2340.000132
ORF1ab/nsp13584K584KaaGaaA11B.1.258.170.000104
ORF1ab/nsp13584K584RaAgaGg11B.1.3110.000275
ORF1ab/nsp13584K584EAagGag11B.1.3510.00003
ORF1ab/nsp13584K584KaaGaaA11B.1.36.350.002604
ORF1ab/nsp13584K584KaaGaaA11B.1.3970.004854
ORF1ab/nsp13584K584EAagGag11B.1.3970.004854
ORF1ab/nsp13584K584KaaGaaA11B.1.3990.001934
ORF1ab/nsp13584K584NaaGaaT11B.1.4290.000024
ORF1ab/nsp13584K584RaAgaGg11B.1.4290.000024
ORF1ab/nsp13584K584KaaGaaA11B.1.4380.006536
ORF1ab/nsp13584K584RaAgaGg11B.1.4740.001901
ORF1ab/nsp13584K584NaaGaaT11B.1.5880.00091
ORF1ab/nsp13584K584KaaGaaA11B.1.5960.000087
ORF1ab/nsp13584K584EAagGag11B.1.6090.000479
ORF1ab/nsp13584K584RAAGCGA11B.1.617.30.002985
ORF1ab/nsp13584K584delAAG---11C.170.055556
ORF1ab/nsp13584K584EAagGag11P.10.000016
ORF1ab/nsp13584K584NaaGaaT11P.1.10.10.00813
ORF1ab/nsp13584K584KaaGaaA11P.1.140.000048
ORF1ab/nsp13584K584NaaGaaT11Q.20.000613
ORF1ab/nsp13584K584delAAG---11Q.80.000165