CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 53 & Codon = Tca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1353P53SP5377SnonsynCcaTca574357400.99947816393-16395

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1353P53SCcaTca57405743All0.001098
ORF1ab/nsp1353P53SCcaTca37143714B.1.1.70.003325
ORF1ab/nsp1353P53SCcaTca143143AY.440.00087
ORF1ab/nsp1353P53SCcaTca142142AY.40.000221
ORF1ab/nsp1353P53SCcaTca130130AY.1030.000807
ORF1ab/nsp1353P53SCcaTca9797AY.250.000583
ORF1ab/nsp1353P53SCcaTca9191AY.430.000403
ORF1ab/nsp1353P53SCcaTca7171B.10.00065
ORF1ab/nsp1353P53SCcaTca7070B.1.20.000616
ORF1ab/nsp1353P53SCcaTca6767B.1.617.20.000252
ORF1ab/nsp1353P53SCcaTca6565B.1.1.2840.006981
ORF1ab/nsp1353P53SCcaTca6060B.1.10.001088
ORF1ab/nsp1353P53SCcaTca6060P.10.000945
ORF1ab/nsp1353P53SCcaTca5959AY.4.20.00128
ORF1ab/nsp1353P53SCcaTca4848Q.80.007916
ORF1ab/nsp1353P53SCcaTca3939AY.1130.005553
ORF1ab/nsp1353P53SCcaTca3838B.1.4290.000894
ORF1ab/nsp1353P53SCcaTca3333B.1.1770.000435
ORF1ab/nsp1353P53SCcaTca3030AY.200.001166
ORF1ab/nsp1353P53SCcaTca2626B.1.3510.000773
ORF1ab/nsp1353P53SCcaTca2424B.1.2340.003167
ORF1ab/nsp1353P53SCcaTca2121B.1.4710.057377
ORF1ab/nsp1353P53SCcaTca1818AY.390.000445
ORF1ab/nsp1353P53SCcaTca1818AY.9.20.000661
ORF1ab/nsp1353P53SCcaTca1717AY.920.004884
ORF1ab/nsp1353P53SCcaTca1616B.1.1.3170.006587
ORF1ab/nsp1353P53SCcaTca1616B.1.5260.000376
ORF1ab/nsp1353P53SCcaTca1515B.1.1600.000468
ORF1ab/nsp1353P53SCcaTca1414AY.660.014973
ORF1ab/nsp1353P53SCcaTca1414Q.10.001769
ORF1ab/nsp1353P53SCcaTca1313AY.99.20.001198
ORF1ab/nsp1353P53SCcaTca1313B.1.1.10.004247
ORF1ab/nsp1353P53SCcaTca1313B.1.1.5190.000516
ORF1ab/nsp1353P53SCcaTca1212AY.1020.000318
ORF1ab/nsp1353P53SCcaTca1212B.1.1.2140.000665
ORF1ab/nsp1353P53SCcaTca1111AY.30.000109
ORF1ab/nsp1353P53SCcaTca1010AY.1190.000353
ORF1ab/nsp1353P53SCcaTca1010B.1.2430.000696
ORF1ab/nsp1353P53SCcaTca99AY.290.000142
ORF1ab/nsp1353P53SCcaTca99AY.99.10.013975
ORF1ab/nsp1353P53SCcaTca99B.1.1.2220.001836
ORF1ab/nsp1353P53SCcaTca99C.140.038961
ORF1ab/nsp1353P53SCcaTca99C.370.001045
ORF1ab/nsp1353P53SCcaTca88B.1.3110.002197
ORF1ab/nsp1353P53SCcaTca88B.1.5880.007279
ORF1ab/nsp1353P53SCcaTca77AY.1100.000789
ORF1ab/nsp1353P53SCcaTca77AY.470.000218
ORF1ab/nsp1353P53SCcaTca77AY.50.000145
ORF1ab/nsp1353P53SCcaTca77AY.750.000392
ORF1ab/nsp1353P53SCcaTca77B.1.1.2970.01566
ORF1ab/nsp1353P53SCcaTca77B.1.160.160.006506
ORF1ab/nsp1353P53SCcaTca77B.1.160.300.020833
ORF1ab/nsp1353P53SCcaTca77R.10.00063
ORF1ab/nsp1353P53SCcaTca66AY.1000.000276
ORF1ab/nsp1353P53SCcaTca66AY.270.000388
ORF1ab/nsp1353P53SCcaTca66AY.4.40.002455
ORF1ab/nsp1353P53SCcaTca66B.1.1.1580.073171
ORF1ab/nsp1353P53SCcaTca66B.1.5960.000523
ORF1ab/nsp1353P53SCcaTca55AY.1200.000186
ORF1ab/nsp1353P53SCcaTca55AY.260.000142
ORF1ab/nsp1353P53SCcaTca55AY.420.000201
ORF1ab/nsp1353P53SCcaTca55AY.9.10.000419
ORF1ab/nsp1353P53SCcaTca55B.1.1.2790.005605
ORF1ab/nsp1353P53SCcaTca55B.1.160.80.006443
ORF1ab/nsp1353P53SCcaTca55B.1.177.350.003455
ORF1ab/nsp1353P53SCcaTca55B.1.2580.000333
ORF1ab/nsp1353P53SCcaTca55B.1.6090.002397
ORF1ab/nsp1353P53SCcaTca55B.1.6210.000443
ORF1ab/nsp1353P53SCcaTca44AH.20.048193
ORF1ab/nsp1353P53SCcaTca44AY.330.000267
ORF1ab/nsp1353P53SCcaTca44AY.340.000388
ORF1ab/nsp1353P53SCcaTca44AY.360.000593
ORF1ab/nsp1353P53SCcaTca44B0.000511
ORF1ab/nsp1353P53SCcaTca44B.1.110.30.002874
ORF1ab/nsp1353P53SCcaTca44B.1.1390.002933
ORF1ab/nsp1353P53SCcaTca44B.1.2400.000862
ORF1ab/nsp1353P53SCcaTca44B.1.466.20.001565
ORF1ab/nsp1353P53SCcaTca44B.1.4690.01444
ORF1ab/nsp1353P53SCcaTca44B.1.5210.0199
ORF1ab/nsp1353P53SCcaTca44B.1.617.10.000516
ORF1ab/nsp1353P53SCcaTca44P.1.140.000191
ORF1ab/nsp1353P53SCcaTca33AY.1210.000406
ORF1ab/nsp1353P53SCcaTca33AY.4.50.000322
ORF1ab/nsp1353P53SCcaTca33AY.46.40.000494
ORF1ab/nsp1353P53SCcaTca33AY.60.000123
ORF1ab/nsp1353P53SCcaTca33AY.70.000588
ORF1ab/nsp1353P53SCcaTca33B.1.1.3060.001315
ORF1ab/nsp1353P53SCcaTca33B.1.1.4320.003797
ORF1ab/nsp1353P53SCcaTca33B.1.177.430.004431
ORF1ab/nsp1353P53SCcaTca33B.1.177.60.00293
ORF1ab/nsp1353P53SCcaTca33B.1.214.20.001799
ORF1ab/nsp1353P53SCcaTca33B.1.221.40.0125
ORF1ab/nsp1353P53SCcaTca33B.1.3750.002459
ORF1ab/nsp1353P53SCcaTca33B.1.5250.000339
ORF1ab/nsp1353P53SCcaTca33B.1.5780.053571
ORF1ab/nsp1353P53SCcaTca33B.1.6230.001609
ORF1ab/nsp1353P53SCcaTca33D.20.000225
ORF1ab/nsp1353P53SCcaTca33P.1.170.000485
ORF1ab/nsp1353P53SCcaTca120.055556
ORF1ab/nsp1353P53SCcaTca22A.23.10.001408
ORF1ab/nsp1353P53SCcaTca22AY.1140.000462
ORF1ab/nsp1353P53SCcaTca22AY.230.000139
ORF1ab/nsp1353P53SCcaTca22AY.350.000466
ORF1ab/nsp1353P53SCcaTca22AY.380.000999
ORF1ab/nsp1353P53SCcaTca22AY.4.10.001475
ORF1ab/nsp1353P53SCcaTca22AY.46.60.000144
ORF1ab/nsp1353P53SCcaTca22AY.530.000575
ORF1ab/nsp1353P53SCcaTca22AY.7.10.000225
ORF1ab/nsp1353P53SCcaTca22AY.710.00095
ORF1ab/nsp1353P53SCcaTca22AY.910.001461
ORF1ab/nsp1353P53SCcaTca22AY.98.10.000097
ORF1ab/nsp1353P53SCcaTca22B.1.1.1530.002191
ORF1ab/nsp1353P53SCcaTca22B.1.1.1610.007067
ORF1ab/nsp1353P53SCcaTca22B.1.1.2170.007273
ORF1ab/nsp1353P53SCcaTca22B.1.1.250.001137
ORF1ab/nsp1353P53SCcaTca22B.1.1.280.000622
ORF1ab/nsp1353P53SCcaTca22B.1.1.3160.00185
ORF1ab/nsp1353P53SCcaTca22B.1.1.370.000386
ORF1ab/nsp1353P53SCcaTca22B.1.1.390.001019
ORF1ab/nsp1353P53SCcaTca22B.1.1430.042553
ORF1ab/nsp1353P53SCcaTca22B.1.177.120.000303
ORF1ab/nsp1353P53SCcaTca22B.1.177.320.002699
ORF1ab/nsp1353P53SCcaTca22B.1.177.500.00939
ORF1ab/nsp1353P53SCcaTca22B.1.177.730.001133
ORF1ab/nsp1353P53SCcaTca22B.1.177.810.000379
ORF1ab/nsp1353P53SCcaTca22B.1.2210.000142
ORF1ab/nsp1353P53SCcaTca22B.1.2650.002541
ORF1ab/nsp1353P53SCcaTca22B.1.2890.005319
ORF1ab/nsp1353P53SCcaTca12B.1.3360.002439
ORF1ab/nsp1353P53SCcaTca22B.1.3490.00143
ORF1ab/nsp1353P53SCcaTca22B.1.360.000292
ORF1ab/nsp1353P53SCcaTca22B.1.36.290.001035
ORF1ab/nsp1353P53SCcaTca22B.1.3960.001411
ORF1ab/nsp1353P53SCcaTca22B.1.438.10.000215
ORF1ab/nsp1353P53SCcaTca22B.1.4970.00063
ORF1ab/nsp1353P53SCcaTca22B.1.5950.000522
ORF1ab/nsp1353P53SCcaTca22B.1.619.10.001283
ORF1ab/nsp1353P53SCcaTca22B.1.6280.000705
ORF1ab/nsp1353P53SCcaTca22B.400.000729
ORF1ab/nsp1353P53SCcaTca22P.1.100.000539
ORF1ab/nsp1353P53SCcaTca22Q.30.00029
ORF1ab/nsp1353P53SCcaTca11A0.000387
ORF1ab/nsp1353P53SCcaTca11A.10.000282
ORF1ab/nsp1353P53SCcaTca11A.2.5.10.004808
ORF1ab/nsp1353P53SCcaTca11AT.10.005128
ORF1ab/nsp1353P53SCcaTca11AU.10.001266
ORF1ab/nsp1353P53SCcaTca11AV.10.005051
ORF1ab/nsp1353P53SCcaTca11AY.1010.00049
ORF1ab/nsp1353P53SCcaTca11AY.1050.000643
ORF1ab/nsp1353P53SCcaTca11AY.1080.001103
ORF1ab/nsp1353P53SCcaTca11AY.1160.000287
ORF1ab/nsp1353P53SCcaTca11AY.116.10.000311
ORF1ab/nsp1353P53SCcaTca11AY.1170.000085
ORF1ab/nsp1353P53SCcaTca11AY.120.2.10.000498
ORF1ab/nsp1353P53SCcaTca11AY.16.10.00047
ORF1ab/nsp1353P53SCcaTca11AY.20.000356
ORF1ab/nsp1353P53SCcaTca11AY.3.10.000085
ORF1ab/nsp1353P53SCcaTca11AY.300.000396
ORF1ab/nsp1353P53SCcaTca11AY.39.10.00004
ORF1ab/nsp1353P53SCcaTca11AY.4.30.000842
ORF1ab/nsp1353P53SCcaTca11AY.450.000122
ORF1ab/nsp1353P53SCcaTca11AY.460.000104
ORF1ab/nsp1353P53SCcaTca11AY.5.30.000337
ORF1ab/nsp1353P53SCcaTca11AY.540.000095
ORF1ab/nsp1353P53SCcaTca11AY.610.000105
ORF1ab/nsp1353P53SCcaTca11AY.740.000116
ORF1ab/nsp1353P53SCcaTca11AY.75.10.00018
ORF1ab/nsp1353P53SCcaTca11AY.770.001127
ORF1ab/nsp1353P53SCcaTca11AY.840.000437
ORF1ab/nsp1353P53SCcaTca11AY.880.000884
ORF1ab/nsp1353P53SCcaTca11AY.90.000068
ORF1ab/nsp1353P53SCcaTca11AY.9.2.10.001976
ORF1ab/nsp1353P53SCcaTca11B.1.1.1380.006061
ORF1ab/nsp1353P53SCcaTca11B.1.1.1740.003378
ORF1ab/nsp1353P53SCcaTca11B.1.1.2200.001859
ORF1ab/nsp1353P53SCcaTca11B.1.1.2410.00207
ORF1ab/nsp1353P53SCcaTca11B.1.1.2630.001558
ORF1ab/nsp1353P53SCcaTca11B.1.1.330.000421
ORF1ab/nsp1353P53SCcaTca11B.1.1.3630.005988
ORF1ab/nsp1353P53SCcaTca11B.1.1.3720.000689
ORF1ab/nsp1353P53SCcaTca11B.1.1.3770.001381
ORF1ab/nsp1353P53SCcaTca11B.1.1.4120.007634
ORF1ab/nsp1353P53SCcaTca11B.1.1.440.00241
ORF1ab/nsp1353P53SCcaTca11B.1.1.4480.002033
ORF1ab/nsp1353P53SCcaTca11B.1.1.5070.008696
ORF1ab/nsp1353P53SCcaTca11B.1.1110.001175
ORF1ab/nsp1353P53SCcaTca11B.1.1460.004237
ORF1ab/nsp1353P53SCcaTca11B.1.160.290.004219
ORF1ab/nsp1353P53SCcaTca11B.1.177.110.001698
ORF1ab/nsp1353P53SCcaTca11B.1.177.140.006098
ORF1ab/nsp1353P53SCcaTca11B.1.177.200.001517
ORF1ab/nsp1353P53SCcaTca11B.1.177.40.000211
ORF1ab/nsp1353P53SCcaTca11B.1.177.600.000218
ORF1ab/nsp1353P53SCcaTca11B.1.177.620.001192
ORF1ab/nsp1353P53SCcaTca11B.1.177.70.000165
ORF1ab/nsp1353P53SCcaTca11B.1.177.860.000183
ORF1ab/nsp1353P53SCcaTca11B.1.2100.002132
ORF1ab/nsp1353P53SCcaTca11B.1.2370.004975
ORF1ab/nsp1353P53SCcaTca11B.1.258.120.007874
ORF1ab/nsp1353P53SCcaTca11B.1.258.20.004505
ORF1ab/nsp1353P53SCcaTca11B.1.258.30.001675
ORF1ab/nsp1353P53SCcaTca11B.1.2790.000514
ORF1ab/nsp1353P53SCcaTca11B.1.3200.001245
ORF1ab/nsp1353P53SCcaTca11B.1.3250.006897
ORF1ab/nsp1353P53SCcaTca11B.1.3290.000608
ORF1ab/nsp1353P53SCcaTca11B.1.3380.008621
ORF1ab/nsp1353P53SCcaTca11B.1.3460.001311
ORF1ab/nsp1353P53SCcaTca11B.1.351.30.000876
ORF1ab/nsp1353P53SCcaTca11B.1.36.80.001
ORF1ab/nsp1353P53SCcaTca11B.1.370.014706
ORF1ab/nsp1353P53SCcaTca11B.1.3710.001122
ORF1ab/nsp1353P53SCcaTca11B.1.4000.000429
ORF1ab/nsp1353P53SCcaTca11B.1.4080.00369
ORF1ab/nsp1353P53SCcaTca11B.1.4090.000781
ORF1ab/nsp1353P53SCcaTca11B.1.4200.010417
ORF1ab/nsp1353P53SCcaTca11B.1.4220.000812
ORF1ab/nsp1353P53SCcaTca11B.1.4270.00005
ORF1ab/nsp1353P53SCcaTca11B.1.428.30.012821
ORF1ab/nsp1353P53SCcaTca11B.1.4320.011236
ORF1ab/nsp1353P53SCcaTca11B.1.4520.013699
ORF1ab/nsp1353P53SCcaTca11B.1.4590.004082
ORF1ab/nsp1353P53SCcaTca11B.1.466.10.007194
ORF1ab/nsp1353P53SCcaTca11B.1.5010.007353
ORF1ab/nsp1353P53SCcaTca11B.1.5330.009615
ORF1ab/nsp1353P53SCcaTca11B.1.5650.00081
ORF1ab/nsp1353P53SCcaTca11B.1.5750.000303
ORF1ab/nsp1353P53SCcaTca11B.1.5820.000491
ORF1ab/nsp1353P53SCcaTca11B.1.6000.005848
ORF1ab/nsp1353P53SCcaTca11B.1.6190.000871
ORF1ab/nsp1353P53SCcaTca11B.1.6200.000946
ORF1ab/nsp1353P53SCcaTca11B.1.6370.000073
ORF1ab/nsp1353P53SCcaTca11B.290.003509
ORF1ab/nsp1353P53SCcaTca11B.390.002331
ORF1ab/nsp1353P53SCcaTca11B.40.002208
ORF1ab/nsp1353P53SCcaTca11C.30.007634
ORF1ab/nsp1353P53SCcaTca11N.50.001767
ORF1ab/nsp1353P53SCcaTca11N.90.005952
ORF1ab/nsp1353P53SCcaTca11P.1.10.10.00813
ORF1ab/nsp1353P53SCcaTca11P.1.120.000484
ORF1ab/nsp1353P53SCcaTca11P.1.150.000232
ORF1ab/nsp1353P53SCcaTca11P.1.60.001946
ORF1ab/nsp1353P53SCcaTca11P.1.70.000319
ORF1ab/nsp1353P53SCcaTca11P.1.90.004808
ORF1ab/nsp1353P53SCcaTca11P.20.000187
ORF1ab/nsp1353P53SCcaTca11Q.40.000455
ORF1ab/nsp1353P53SCcaTca11U.10.012821
ORF1ab/nsp1353P53SCcaTca11W.40.001351