CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 529 & Codon = Tca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13529P529SP5853SnonsynCcaTca249249117821-17823

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13529P529SCcaTca249249All0.000048
ORF1ab/nsp13529P529SCcaTca4848B.1.1.70.000043
ORF1ab/nsp13529P529SCcaTca1818AY.40.000028
ORF1ab/nsp13529P529SCcaTca1515B.1.6210.001328
ORF1ab/nsp13529P529SCcaTca1313B.1.6370.00095
ORF1ab/nsp13529P529SCcaTca1212B.1.20.000106
ORF1ab/nsp13529P529SCcaTca1212B.1.617.20.000045
ORF1ab/nsp13529P529SCcaTca1111B.10.000101
ORF1ab/nsp13529P529SCcaTca1010B.1.3510.000297
ORF1ab/nsp13529P529SCcaTca66AY.440.000037
ORF1ab/nsp13529P529SCcaTca66B.1.177.600.001311
ORF1ab/nsp13529P529SCcaTca55B.1.4290.000118
ORF1ab/nsp13529P529SCcaTca44AY.1200.000149
ORF1ab/nsp13529P529SCcaTca44AY.30.00004
ORF1ab/nsp13529P529SCcaTca44AY.390.000099
ORF1ab/nsp13529P529SCcaTca44P.10.000063
ORF1ab/nsp13529P529SCcaTca44Q.10.000505
ORF1ab/nsp13529P529SCcaTca33AY.1030.000019
ORF1ab/nsp13529P529SCcaTca33AY.250.000018
ORF1ab/nsp13529P529SCcaTca33AY.330.0002
ORF1ab/nsp13529P529SCcaTca33AY.4.50.000322
ORF1ab/nsp13529P529SCcaTca33B.1.10.000054
ORF1ab/nsp13529P529SCcaTca33B.1.1.3690.001339
ORF1ab/nsp13529P529SCcaTca33B.1.1.5190.000119
ORF1ab/nsp13529P529SCcaTca33B.1.1770.00004
ORF1ab/nsp13529P529SCcaTca22AY.1190.000071
ORF1ab/nsp13529P529SCcaTca22AY.290.000032
ORF1ab/nsp13529P529SCcaTca22AY.430.000009
ORF1ab/nsp13529P529SCcaTca22AY.50.000041
ORF1ab/nsp13529P529SCcaTca22AY.9.20.000073
ORF1ab/nsp13529P529SCcaTca22B.1.1.10.000653
ORF1ab/nsp13529P529SCcaTca22B.1.1.3180.000604
ORF1ab/nsp13529P529SCcaTca22B.1.5610.000794
ORF1ab/nsp13529P529SCcaTca11AY.1020.000027
ORF1ab/nsp13529P529SCcaTca11AY.1180.000063
ORF1ab/nsp13529P529SCcaTca11AY.140.000088
ORF1ab/nsp13529P529SCcaTca11AY.160.00038
ORF1ab/nsp13529P529SCcaTca11AY.190.00114
ORF1ab/nsp13529P529SCcaTca11AY.230.00007
ORF1ab/nsp13529P529SCcaTca11AY.260.000028
ORF1ab/nsp13529P529SCcaTca11AY.270.000065
ORF1ab/nsp13529P529SCcaTca11AY.39.10.00004
ORF1ab/nsp13529P529SCcaTca11AY.540.000095
ORF1ab/nsp13529P529SCcaTca11AY.610.000105
ORF1ab/nsp13529P529SCcaTca11AY.750.000056
ORF1ab/nsp13529P529SCcaTca11AY.9.10.000084
ORF1ab/nsp13529P529SCcaTca11AY.900.000684
ORF1ab/nsp13529P529SCcaTca11AY.99.20.000092
ORF1ab/nsp13529P529SCcaTca11AZ.10.000867
ORF1ab/nsp13529P529SCcaTca11B.1.1.1570.000913
ORF1ab/nsp13529P529SCcaTca11B.1.1.2220.000204
ORF1ab/nsp13529P529SCcaTca11B.1.1.2690.001353
ORF1ab/nsp13529P529SCcaTca11B.1.1.2790.001121
ORF1ab/nsp13529P529SCcaTca11B.1.1.3010.001179
ORF1ab/nsp13529P529SCcaTca11B.1.1190.010526
ORF1ab/nsp13529P529SCcaTca11B.1.177.810.000189
ORF1ab/nsp13529P529SCcaTca11B.1.177.860.000183
ORF1ab/nsp13529P529SCcaTca11B.1.36.310.001751
ORF1ab/nsp13529P529SCcaTca11B.1.4270.00005
ORF1ab/nsp13529P529SCcaTca11B.1.5260.000024
ORF1ab/nsp13529P529SCcaTca11B.1.5440.006024
ORF1ab/nsp13529P529SCcaTca11B.1.5950.000261
ORF1ab/nsp13529P529SCcaTca11B.1.5960.000087
ORF1ab/nsp13529P529SCcaTca11B.1.617.10.000129
ORF1ab/nsp13529P529SCcaTca11P.20.000187
ORF1ab/nsp13529P529SCcaTca11R.10.00009