CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 505 & Codon = gTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13505A505VA5829VnonsyngCtgTt34613461117749-17751

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13505A505VgCtgTt34613461All0.000662
ORF1ab/nsp13505A505VgCtgTt972972AY.430.004306
ORF1ab/nsp13505A505VgCtgTt529529B.1.1.70.000474
ORF1ab/nsp13505A505VgCtgTt203203B.1.220.267457
ORF1ab/nsp13505A505VgCtgTt177177B.1.1.1530.193866
ORF1ab/nsp13505A505VgCtgTt167167AY.40.00026
ORF1ab/nsp13505A505VgCtgTt7373AY.260.002067
ORF1ab/nsp13505A505VgCtgTt6969B.1.617.20.00026
ORF1ab/nsp13505A505VgCtgTt5858AY.440.000353
ORF1ab/nsp13505A505VgCtgTt5454B.1.5750.016383
ORF1ab/nsp13505A505VgCtgTt5353AY.250.000319
ORF1ab/nsp13505A505VgCtgTt4949B.1.1.2290.281609
ORF1ab/nsp13505A505VgCtgTt4949B.1.1.3540.214912
ORF1ab/nsp13505A505VgCtgTt4747P.10.00074
ORF1ab/nsp13505A505VgCtgTt4646B.10.000421
ORF1ab/nsp13505A505VgCtgTt4040B.1.20.000352
ORF1ab/nsp13505A505VgCtgTt3838AY.30.000378
ORF1ab/nsp13505A505VgCtgTt3636AY.1030.000224
ORF1ab/nsp13505A505VgCtgTt3434B.1.10.000617
ORF1ab/nsp13505A505VgCtgTt3333AY.460.003435
ORF1ab/nsp13505A505VgCtgTt3232B.1.22.11
ORF1ab/nsp13505A505VgCtgTt3232B.1.3110.008786
ORF1ab/nsp13505A505VgCtgTt2828AY.390.000692
ORF1ab/nsp13505A505VgCtgTt2323AY.1210.003112
ORF1ab/nsp13505A505VgCtgTt2222AY.50.000454
ORF1ab/nsp13505A505VgCtgTt2121AY.1200.000781
ORF1ab/nsp13505A505VgCtgTt2121AY.200.000816
ORF1ab/nsp13505A505VgCtgTt2121B.1.1.3170.008646
ORF1ab/nsp13505A505VgCtgTt1818P.1.170.002912
ORF1ab/nsp13505A505VgCtgTt1616AA.10.115942
ORF1ab/nsp13505A505VgCtgTt1515P.1.70.004789
ORF1ab/nsp13505A505VgCtgTt1313AY.39.10.000515
ORF1ab/nsp13505A505VgCtgTt1313B.1.2580.000865
ORF1ab/nsp13505A505VgCtgTt1111B.1.5250.001245
ORF1ab/nsp13505A505VgCtgTt1010AY.1020.000265
ORF1ab/nsp13505A505VgCtgTt1010AY.46.20.006353
ORF1ab/nsp13505A505VgCtgTt1010B.1.5600.046296
ORF1ab/nsp13505A505VgCtgTt99AY.140.000792
ORF1ab/nsp13505A505VgCtgTt99B.1.360.001313
ORF1ab/nsp13505A505VgCtgTt99B.1.3850.095745
ORF1ab/nsp13505A505VgCtgTt99B.1.617.10.001161
ORF1ab/nsp13505A505VgCtgTt88AY.290.000126
ORF1ab/nsp13505A505VgCtgTt88B.1.1600.00025
ORF1ab/nsp13505A505VgCtgTt88B.1.1770.000105
ORF1ab/nsp13505A505VgCtgTt88B.1.4270.000404
ORF1ab/nsp13505A505VgCtgTt77AY.1000.000322
ORF1ab/nsp13505A505VgCtgTt77AY.120.002212
ORF1ab/nsp13505A505VgCtgTt77AY.4.20.000152
ORF1ab/nsp13505A505VgCtgTt77AY.640.004167
ORF1ab/nsp13505A505VgCtgTt77B0.000895
ORF1ab/nsp13505A505VgCtgTt77B.1.1.5190.000278
ORF1ab/nsp13505A505VgCtgTt77P.1.150.001626
ORF1ab/nsp13505A505VgCtgTt66B.1.1.3680.018519
ORF1ab/nsp13505A505VgCtgTt66B.1.1390.004399
ORF1ab/nsp13505A505VgCtgTt66B.1.177.820.002864
ORF1ab/nsp13505A505VgCtgTt66B.1.2430.000418
ORF1ab/nsp13505A505VgCtgTt66B.1.36.290.003104
ORF1ab/nsp13505A505VgCtgTt66B.1.5950.001566
ORF1ab/nsp13505A505VgCtgTt66B.1.5960.000523
ORF1ab/nsp13505A505VgCtgTt66B.1.6210.000531
ORF1ab/nsp13505A505VgCtgTt66Q.80.000989
ORF1ab/nsp13505A505VgCtgTt55AY.1180.000313
ORF1ab/nsp13505A505VgCtgTt55AY.230.000349
ORF1ab/nsp13505A505VgCtgTt55AY.340.000485
ORF1ab/nsp13505A505VgCtgTt55B.1.1.2140.000277
ORF1ab/nsp13505A505VgCtgTt55B.1.4560.01634
ORF1ab/nsp13505A505VgCtgTt55C.370.00058
ORF1ab/nsp13505A505VgCtgTt44AY.160.001519
ORF1ab/nsp13505A505VgCtgTt44AY.60.000165
ORF1ab/nsp13505A505VgCtgTt44AY.690.000747
ORF1ab/nsp13505A505VgCtgTt44B.1.1.3480.003185
ORF1ab/nsp13505A505VgCtgTt44B.1.2210.000284
ORF1ab/nsp13505A505VgCtgTt44B.1.2400.000862
ORF1ab/nsp13505A505VgCtgTt44B.1.3510.000119
ORF1ab/nsp13505A505VgCtgTt44B.1.4290.000094
ORF1ab/nsp13505A505VgCtgTt44P.1.10.001271
ORF1ab/nsp13505A505VgCtgTt33AY.270.000194
ORF1ab/nsp13505A505VgCtgTt33AY.420.000121
ORF1ab/nsp13505A505VgCtgTt33AY.46.60.000217
ORF1ab/nsp13505A505VgCtgTt33AY.470.000093
ORF1ab/nsp13505A505VgCtgTt33AY.580.002722
ORF1ab/nsp13505A505VgCtgTt33AY.710.001425
ORF1ab/nsp13505A505VgCtgTt33AY.750.000168
ORF1ab/nsp13505A505VgCtgTt33B.1.1.2840.000322
ORF1ab/nsp13505A505VgCtgTt33B.1.1.370.000579
ORF1ab/nsp13505A505VgCtgTt33B.1.1.3970.006757
ORF1ab/nsp13505A505VgCtgTt33B.1.1.500.002037
ORF1ab/nsp13505A505VgCtgTt33B.1.2390.003663
ORF1ab/nsp13505A505VgCtgTt22AU.30.004219
ORF1ab/nsp13505A505VgCtgTt22AY.1130.000285
ORF1ab/nsp13505A505VgCtgTt22AY.1170.000169
ORF1ab/nsp13505A505VgCtgTt22AY.1190.000071
ORF1ab/nsp13505A505VgCtgTt22AY.3.10.000171
ORF1ab/nsp13505A505VgCtgTt22AY.4.2.10.000298
ORF1ab/nsp13505A505VgCtgTt22AY.46.40.000329
ORF1ab/nsp13505A505VgCtgTt22AY.490.00639
ORF1ab/nsp13505A505VgCtgTt22AY.610.00021
ORF1ab/nsp13505A505VgCtgTt22AY.98.10.000097
ORF1ab/nsp13505A505VgCtgTt22B.1.1.100.00223
ORF1ab/nsp13505A505VgCtgTt22B.1.1.1410.004024
ORF1ab/nsp13505A505VgCtgTt22B.1.1.2220.000408
ORF1ab/nsp13505A505VgCtgTt22B.1.1.2940.002532
ORF1ab/nsp13505A505VgCtgTt22B.1.1.2980.001724
ORF1ab/nsp13505A505VgCtgTt22B.1.1.330.000842
ORF1ab/nsp13505A505VgCtgTt22B.1.1.4330.002849
ORF1ab/nsp13505A505VgCtgTt22B.1.1.630.000772
ORF1ab/nsp13505A505VgCtgTt22B.1.160.270.030303
ORF1ab/nsp13505A505VgCtgTt22B.1.177.210.000153
ORF1ab/nsp13505A505VgCtgTt22B.1.177.690.002967
ORF1ab/nsp13505A505VgCtgTt22B.1.177.860.000367
ORF1ab/nsp13505A505VgCtgTt22B.1.258.120.015748
ORF1ab/nsp13505A505VgCtgTt22B.1.258.170.000208
ORF1ab/nsp13505A505VgCtgTt22B.1.351.30.001753
ORF1ab/nsp13505A505VgCtgTt22B.1.36.280.011494
ORF1ab/nsp13505A505VgCtgTt22B.1.4280.002041
ORF1ab/nsp13505A505VgCtgTt22B.1.5170.000854
ORF1ab/nsp13505A505VgCtgTt22B.1.5680.002222
ORF1ab/nsp13505A505VgCtgTt22B.1.5820.000981
ORF1ab/nsp13505A505VgCtgTt22C.160.002121
ORF1ab/nsp13505A505VgCtgTt22C.360.001821
ORF1ab/nsp13505A505VgCtgTt22P.1.140.000096
ORF1ab/nsp13505A505VgCtgTt22Q.10.000253
ORF1ab/nsp13505A505VgCtgTt22Q.30.00029
ORF1ab/nsp13505A505VgCtgTt11AL.10.012987
ORF1ab/nsp13505A505VgCtgTt11AT.10.005128
ORF1ab/nsp13505A505VgCtgTt11AY.1070.000466
ORF1ab/nsp13505A505VgCtgTt11AY.1080.001103
ORF1ab/nsp13505A505VgCtgTt11AY.1100.000113
ORF1ab/nsp13505A505VgCtgTt11AY.1160.000287
ORF1ab/nsp13505A505VgCtgTt11AY.190.00114
ORF1ab/nsp13505A505VgCtgTt11AY.20.000356
ORF1ab/nsp13505A505VgCtgTt11AY.300.000396
ORF1ab/nsp13505A505VgCtgTt11AY.330.000067
ORF1ab/nsp13505A505VgCtgTt11AY.34.10.00051
ORF1ab/nsp13505A505VgCtgTt11AY.360.000148
ORF1ab/nsp13505A505VgCtgTt11AY.4.50.000107
ORF1ab/nsp13505A505VgCtgTt11AY.410.000294
ORF1ab/nsp13505A505VgCtgTt11AY.870.000833
ORF1ab/nsp13505A505VgCtgTt11AY.90.000068
ORF1ab/nsp13505A505VgCtgTt11AY.9.10.000084
ORF1ab/nsp13505A505VgCtgTt11AY.900.000684
ORF1ab/nsp13505A505VgCtgTt11AY.910.00073
ORF1ab/nsp13505A505VgCtgTt11AY.950.000761
ORF1ab/nsp13505A505VgCtgTt11AY.980.000079
ORF1ab/nsp13505A505VgCtgTt11AY.99.20.000092
ORF1ab/nsp13505A505VgCtgTt11B.1.1.1740.003378
ORF1ab/nsp13505A505VgCtgTt11B.1.1.2630.001558
ORF1ab/nsp13505A505VgCtgTt11B.1.1.280.000311
ORF1ab/nsp13505A505VgCtgTt11B.1.1.3770.001381
ORF1ab/nsp13505A505VgCtgTt11B.1.1.4090.002833
ORF1ab/nsp13505A505VgCtgTt11B.1.1.4200.001006
ORF1ab/nsp13505A505VgCtgTt11B.1.1.5230.001563
ORF1ab/nsp13505A505VgCtgTt11B.1.1.540.003021
ORF1ab/nsp13505A505VgCtgTt11B.1.110.30.000718
ORF1ab/nsp13505A505VgCtgTt11B.1.1280.000635
ORF1ab/nsp13505A505VgCtgTt11B.1.160.260.002421
ORF1ab/nsp13505A505VgCtgTt11B.1.1620.005025
ORF1ab/nsp13505A505VgCtgTt11B.1.1660.008475
ORF1ab/nsp13505A505VgCtgTt11B.1.1690.014925
ORF1ab/nsp13505A505VgCtgTt11B.1.177.150.000631
ORF1ab/nsp13505A505VgCtgTt11B.1.177.410.0025
ORF1ab/nsp13505A505VgCtgTt11B.1.177.430.001477
ORF1ab/nsp13505A505VgCtgTt11B.1.177.50.001242
ORF1ab/nsp13505A505VgCtgTt11B.1.177.60.000977
ORF1ab/nsp13505A505VgCtgTt11B.1.177.600.000218
ORF1ab/nsp13505A505VgCtgTt11B.1.177.830.001481
ORF1ab/nsp13505A505VgCtgTt11B.1.177.90.001332
ORF1ab/nsp13505A505VgCtgTt11B.1.2320.000537
ORF1ab/nsp13505A505VgCtgTt11B.1.2470.014925
ORF1ab/nsp13505A505VgCtgTt11B.1.2840.013158
ORF1ab/nsp13505A505VgCtgTt11B.1.351.20.000303
ORF1ab/nsp13505A505VgCtgTt11B.1.36.170.000494
ORF1ab/nsp13505A505VgCtgTt11B.1.3610.001289
ORF1ab/nsp13505A505VgCtgTt11B.1.3620.001541
ORF1ab/nsp13505A505VgCtgTt11B.1.3690.000285
ORF1ab/nsp13505A505VgCtgTt11B.1.4030.003268
ORF1ab/nsp13505A505VgCtgTt11B.1.4170.028571
ORF1ab/nsp13505A505VgCtgTt11B.1.4220.000812
ORF1ab/nsp13505A505VgCtgTt11B.1.4700.001404
ORF1ab/nsp13505A505VgCtgTt11B.1.5650.00081
ORF1ab/nsp13505A505VgCtgTt11B.1.5980.016949
ORF1ab/nsp13505A505VgCtgTt11B.1.6090.000479
ORF1ab/nsp13505A505VgCtgTt11B.1.6370.000073
ORF1ab/nsp13505A505VgCtgTt11B.1.9.10.032258
ORF1ab/nsp13505A505VgCtgTt11B.1.9.50.005682
ORF1ab/nsp13505A505VgCtgTt11B.1.910.002075
ORF1ab/nsp13505A505VgCtgTt11B.400.000364
ORF1ab/nsp13505A505VgCtgTt11B.60.00091
ORF1ab/nsp13505A505VgCtgTt11C.1.20.004255
ORF1ab/nsp13505A505VgCtgTt11C.170.055556
ORF1ab/nsp13505A505VgCtgTt11C.180.002591
ORF1ab/nsp13505A505VgCtgTt11C.260.007353
ORF1ab/nsp13505A505VgCtgTt11D.20.000075
ORF1ab/nsp13505A505VgCtgTt11P.1.100.000269
ORF1ab/nsp13505A505VgCtgTt11P.1.120.000484
ORF1ab/nsp13505A505VgCtgTt11P.1.40.000977
ORF1ab/nsp13505A505VgCtgTt11P.20.000187
ORF1ab/nsp13505A505VgCtgTt11R.10.00009