CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 499

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13499F499FF5823FsynttCttT48574857117731-17733
ORF1ab/nsp13499F499LF5823LnonsynTtcCtc119980.82352917731-17733
ORF1ab/nsp13499F499LF5823LnonsynttCttA119180.15126117731-17733
ORF1ab/nsp13499F499LF5823LnonsynttCttG11920.016806717731-17733
ORF1ab/nsp13499F499LF5823LnonsynTtCCtT11910.0084033617731-17733
ORF1ab/nsp13499F499delF5823deldelTTC---3232117731-17733
ORF1ab/nsp13499F499IF5823InonsynTtcAtc1515117731-17733
ORF1ab/nsp13499F499VF5823VnonsynTtcGtc88117731-17733
ORF1ab/nsp13499F499YF5823YnonsyntTctAc55117731-17733
ORF1ab/nsp13499F499SF5823SnonsyntTctCc44117731-17733
ORF1ab/nsp13499F499CF5823CnonsyntTctGc320.66666717731-17733
ORF1ab/nsp13499F499CF5823CnonsyntTCtGT310.33333317731-17733
ORF1ab/nsp13499F499del1F5823del1delTtc-tc11117731-17733

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13499F499FttCttT48574857All0.000929
ORF1ab/nsp13499F499FttCttT10021002B.1.1.70.000897
ORF1ab/nsp13499F499FttCttT563563AY.50.011626
ORF1ab/nsp13499F499FttCttT368368B.1.617.20.001386
ORF1ab/nsp13499F499FttCttT267267AY.40.000416
ORF1ab/nsp13499F499FttCttT261261AY.1030.001621
ORF1ab/nsp13499F499FttCttT155155AY.750.008683
ORF1ab/nsp13499F499FttCttT148148B.1.20.001303
ORF1ab/nsp13499F499FttCttT148148P.10.002332
ORF1ab/nsp13499F499FttCttT143143AY.430.000634
ORF1ab/nsp13499F499FttCttT126126B.1.1770.001659
ORF1ab/nsp13499F499LTtcCtc98119All0.000019
ORF1ab/nsp13499F499LttCttA18119All0.000003
ORF1ab/nsp13499F499LttCttG2119All0
ORF1ab/nsp13499F499LTtCCtT1119All0
ORF1ab/nsp13499F499FttCttT112112AY.250.000674
ORF1ab/nsp13499F499FttCttT8686AY.980.006794
ORF1ab/nsp13499F499FttCttT8585B.1.5960.007407
ORF1ab/nsp13499F499FttCttT7272AY.440.000438
ORF1ab/nsp13499F499FttCttT6262AY.4.20.001345
ORF1ab/nsp13499F499FttCttT5757B.10.000522
ORF1ab/nsp13499F499FttCttT5151AY.470.001586
ORF1ab/nsp13499F499FttCttT4949B.1.1600.001528
ORF1ab/nsp13499F499FttCttT4747B.1.5260.001105
ORF1ab/nsp13499F499FttCttT4545B.1.1.5190.001787
ORF1ab/nsp13499F499FttCttT4242B.1.4290.000988
ORF1ab/nsp13499F499FttCttT3434AY.1020.000901
ORF1ab/nsp13499F499FttCttT3333AY.30.000328
ORF1ab/nsp13499F499delTTC---3232All0.000006
ORF1ab/nsp13499F499FttCttT3232B.1.10.000581
ORF1ab/nsp13499F499FttCttT3131B.1.360.004523
ORF1ab/nsp13499F499LTtcCtc2429B.1.1.70.000021
ORF1ab/nsp13499F499LttCttA529B.1.1.70.000004
ORF1ab/nsp13499F499FttCttT2828AY.4.50.00301
ORF1ab/nsp13499F499FttCttT2323AY.60.000946
ORF1ab/nsp13499F499FttCttT2121AY.46.60.001516
ORF1ab/nsp13499F499FttCttT2020AY.1190.000706
ORF1ab/nsp13499F499FttCttT2020AY.840.008749
ORF1ab/nsp13499F499LTtcCtc1919B.1.258.140.018627
ORF1ab/nsp13499F499FttCttT1818B.1.1.2140.000998
ORF1ab/nsp13499F499FttCttT1818B.1.1.2220.003672
ORF1ab/nsp13499F499FttCttT1717B.1.2400.003665
ORF1ab/nsp13499F499ITtcAtc1515All0.000003
ORF1ab/nsp13499F499FttCttT1515AY.1180.00094
ORF1ab/nsp13499F499FttCttT1313AY.390.000321
ORF1ab/nsp13499F499FttCttT1313B.1.5170.005551
ORF1ab/nsp13499F499FttCttT1313B.520.131313
ORF1ab/nsp13499F499FttCttT1212B.1.910.024896
ORF1ab/nsp13499F499FttCttT1111AY.1000.000506
ORF1ab/nsp13499F499FttCttT1111AY.200.000428
ORF1ab/nsp13499F499FttCttT1111AY.99.20.001014
ORF1ab/nsp13499F499FttCttT1111B.1.6280.003876
ORF1ab/nsp13499F499FttCttT1010AY.1160.002868
ORF1ab/nsp13499F499FttCttT1010AY.610.001048
ORF1ab/nsp13499F499delTTC---1010B.1.1.70.000009
ORF1ab/nsp13499F499FttCttT1010B.1.36.190.092593
ORF1ab/nsp13499F499FttCttT1010B.1.617.10.00129
ORF1ab/nsp13499F499FttCttT99AY.620.003922
ORF1ab/nsp13499F499FttCttT99B.1.2210.000639
ORF1ab/nsp13499F499FttCttT99B.1.2430.000626
ORF1ab/nsp13499F499FttCttT99B.1.6210.000797
ORF1ab/nsp13499F499FttCttT99B.1.6370.000658
ORF1ab/nsp13499F499VTtcGtc88All0.000002
ORF1ab/nsp13499F499LTtcCtc58B.10.000046
ORF1ab/nsp13499F499LttCttA38B.10.000027
ORF1ab/nsp13499F499FttCttT88B.1.160.150.039604
ORF1ab/nsp13499F499FttCttT77AY.1200.00026
ORF1ab/nsp13499F499FttCttT77AY.1210.000947
ORF1ab/nsp13499F499FttCttT77AY.290.00011
ORF1ab/nsp13499F499FttCttT77AY.420.000282
ORF1ab/nsp13499F499FttCttT77B.1.3510.000208
ORF1ab/nsp13499F499FttCttT77B.1.4270.000353
ORF1ab/nsp13499F499FttCttT77B.1.621.10.003541
ORF1ab/nsp13499F499FttCttT66AY.460.000624
ORF1ab/nsp13499F499FttCttT66AY.5.40.00166
ORF1ab/nsp13499F499FttCttT66B.1.1.2360.041379
ORF1ab/nsp13499F499FttCttT66B.1.177.540.003639
ORF1ab/nsp13499F499FttCttT66B.1.177.570.001686
ORF1ab/nsp13499F499ITtcAtc66B.1.2210.000426
ORF1ab/nsp13499F499FttCttT66B.1.2320.003224
ORF1ab/nsp13499F499FttCttT66B.1.2340.000792
ORF1ab/nsp13499F499LTtcCtc66B.1.2580.000399
ORF1ab/nsp13499F499FttCttT66B.1.5650.004862
ORF1ab/nsp13499F499FttCttT66B.1.5950.001566
ORF1ab/nsp13499F499FttCttT66P.1.120.002904
ORF1ab/nsp13499F499LTtcCtc45A0.001548
ORF1ab/nsp13499F499LttCttA15A0.000387
ORF1ab/nsp13499F499LTtcCtc55A.300.714286
ORF1ab/nsp13499F499YtTctAc55All0.000001
ORF1ab/nsp13499F499FttCttT55AY.260.000142
ORF1ab/nsp13499F499FttCttT55AY.340.000485
ORF1ab/nsp13499F499FttCttT55AY.39.10.000198
ORF1ab/nsp13499F499LTtcCtc55AY.40.000008
ORF1ab/nsp13499F499FttCttT55B0.000639
ORF1ab/nsp13499F499FttCttT55B.1.1.250.002843
ORF1ab/nsp13499F499FttCttT55B.1.1.330.002104
ORF1ab/nsp13499F499ITtcAtc55B.1.1.70.000004
ORF1ab/nsp13499F499FttCttT55B.1.177.210.000382
ORF1ab/nsp13499F499LTtcCtc55B.1.177.560.003338
ORF1ab/nsp13499F499FttCttT55B.1.2580.000333
ORF1ab/nsp13499F499FttCttT55B.1.36.290.002587
ORF1ab/nsp13499F499FttCttT55B.1.438.10.000536
ORF1ab/nsp13499F499FttCttT55B.1.466.20.001956
ORF1ab/nsp13499F499FttCttT55B.1.5440.03012
ORF1ab/nsp13499F499FttCttT55P.1.140.000239
ORF1ab/nsp13499F499FttCttT55P.1.150.001162
ORF1ab/nsp13499F499StTctCc44All0.000001
ORF1ab/nsp13499F499FttCttT44AY.10.001583
ORF1ab/nsp13499F499FttCttT44AY.1170.000338
ORF1ab/nsp13499F499FttCttT44AY.230.000279
ORF1ab/nsp13499F499FttCttT44AY.5.30.00135
ORF1ab/nsp13499F499FttCttT44B.1.1.4340.001394
ORF1ab/nsp13499F499FttCttT44B.1.177.630.010811
ORF1ab/nsp13499F499FttCttT44B.1.177.830.005926
ORF1ab/nsp13499F499FttCttT44B.1.36.170.001976
ORF1ab/nsp13499F499FttCttT44B.1.3690.001141
ORF1ab/nsp13499F499FttCttT44B.1.4090.003125
ORF1ab/nsp13499F499FttCttT44B.1.5970.018519
ORF1ab/nsp13499F499FttCttT44B.1.6090.001918
ORF1ab/nsp13499F499delTTC---44B.1.617.20.000015
ORF1ab/nsp13499F499FttCttT44B.1.6230.002146
ORF1ab/nsp13499F499FttCttT44C.160.004242
ORF1ab/nsp13499F499FttCttT44C.370.000464
ORF1ab/nsp13499F499FttCttT44P.1.70.001277
ORF1ab/nsp13499F499CtTctGc23All0
ORF1ab/nsp13499F499CtTCtGT13All0
ORF1ab/nsp13499F499FttCttT33AY.1130.000427
ORF1ab/nsp13499F499FttCttT33AY.450.000365
ORF1ab/nsp13499F499FttCttT33AY.46.40.000494
ORF1ab/nsp13499F499FttCttT33AY.70.000588
ORF1ab/nsp13499F499FttCttT33AY.740.000347
ORF1ab/nsp13499F499FttCttT33AY.90.000203
ORF1ab/nsp13499F499FttCttT33AY.9.20.00011
ORF1ab/nsp13499F499FttCttT33AY.920.000862
ORF1ab/nsp13499F499FttCttT33B.1.1.1890.004539
ORF1ab/nsp13499F499FttCttT33B.1.1.2770.002276
ORF1ab/nsp13499F499FttCttT33B.1.1.280.000934
ORF1ab/nsp13499F499FttCttT33B.1.1.3110.001074
ORF1ab/nsp13499F499FttCttT33B.1.1.3760.017857
ORF1ab/nsp13499F499FttCttT33B.1.1.4860.004732
ORF1ab/nsp13499F499VTtcGtc33B.1.1.70.000003
ORF1ab/nsp13499F499LTtcCtc33B.1.1770.00004
ORF1ab/nsp13499F499FttCttT33B.1.177.860.00055
ORF1ab/nsp13499F499FttCttT33B.1.2410.002435
ORF1ab/nsp13499F499FttCttT33B.1.3490.002144
ORF1ab/nsp13499F499FttCttT33B.1.36.80.003
ORF1ab/nsp13499F499FttCttT33B.1.4260.003027
ORF1ab/nsp13499F499FttCttT33B.1.5750.00091
ORF1ab/nsp13499F499YtTctAc33B.1.617.10.000387
ORF1ab/nsp13499F499FttCttT33D.20.000225
ORF1ab/nsp13499F499FttCttT33P.1.10.000953
ORF1ab/nsp13499F499FttCttT22AE.50.037037
ORF1ab/nsp13499F499FttCttT22AY.1060.00067
ORF1ab/nsp13499F499FttCttT22AY.1080.002205
ORF1ab/nsp13499F499FttCttT22AY.240.000862
ORF1ab/nsp13499F499FttCttT22AY.330.000134
ORF1ab/nsp13499F499FttCttT22AY.34.10.00102
ORF1ab/nsp13499F499delTTC---22AY.40.000003
ORF1ab/nsp13499F499delTTC---22AY.430.000009
ORF1ab/nsp13499F499FttCttT22AY.580.001815
ORF1ab/nsp13499F499FttCttT22AY.640.00119
ORF1ab/nsp13499F499FttCttT22AY.680.000547
ORF1ab/nsp13499F499FttCttT22AY.700.000417
ORF1ab/nsp13499F499FttCttT22AY.820.002714
ORF1ab/nsp13499F499FttCttT22AY.9.10.000167
ORF1ab/nsp13499F499FttCttT22AY.98.10.000097
ORF1ab/nsp13499F499FttCttT22B.1.1.1760.000879
ORF1ab/nsp13499F499FttCttT22B.1.1.2840.000215
ORF1ab/nsp13499F499FttCttT22B.1.1.3060.000877
ORF1ab/nsp13499F499FttCttT22B.1.1.3720.001377
ORF1ab/nsp13499F499ITtcAtc22B.1.1600.000062
ORF1ab/nsp13499F499LTtcCtc22B.1.1600.000062
ORF1ab/nsp13499F499FttCttT22B.1.177.320.002699
ORF1ab/nsp13499F499FttCttT22B.1.177.410.005
ORF1ab/nsp13499F499LTtcCtc12B.1.20.000009
ORF1ab/nsp13499F499LttCttA12B.1.20.000009
ORF1ab/nsp13499F499FttCttT22B.1.36.180.00084
ORF1ab/nsp13499F499FttCttT22B.1.36.220.002415
ORF1ab/nsp13499F499FttCttT22B.1.36.310.003503
ORF1ab/nsp13499F499FttCttT22B.1.5250.000226
ORF1ab/nsp13499F499LTtcCtc22B.1.5580.009132
ORF1ab/nsp13499F499FttCttT22B.1.5640.000852
ORF1ab/nsp13499F499FttCttT22B.1.5770.001375
ORF1ab/nsp13499F499FttCttT22B.1.5820.000981
ORF1ab/nsp13499F499LTtCCtT12B.1.5960.000087
ORF1ab/nsp13499F499LTtcCtc12B.1.5960.000087
ORF1ab/nsp13499F499LTtcCtc22B.1.5970.009259
ORF1ab/nsp13499F499LttCttA12B.1.617.20.000004
ORF1ab/nsp13499F499LTtcCtc12B.1.617.20.000004
ORF1ab/nsp13499F499VTtcGtc22B.1.6210.000177
ORF1ab/nsp13499F499FttCttT22B.1.6270.00404
ORF1ab/nsp13499F499FttCttT22B.30.001661
ORF1ab/nsp13499F499FttCttT22C.10.004785
ORF1ab/nsp13499F499LTtcCtc22D.20.00015
ORF1ab/nsp13499F499FttCttT22P.1.160.000748
ORF1ab/nsp13499F499FttCttT22P.20.000373
ORF1ab/nsp13499F499FttCttT22P.30.00319
ORF1ab/nsp13499F499FttCttT22Q.10.000253
ORF1ab/nsp13499F499FttCttT22Q.80.00033
ORF1ab/nsp13499F499delTTC---11A0.000387
ORF1ab/nsp13499F499FttCttT11A.10.000282
ORF1ab/nsp13499F499FttCttT11A.2.20.001689
ORF1ab/nsp13499F499FttCttT11A.2.50.000499
ORF1ab/nsp13499F499FttCttT11AE.80.000489
ORF1ab/nsp13499F499FttCttT11AH.20.012048
ORF1ab/nsp13499F499del1Ttc-tc11All0
ORF1ab/nsp13499F499LTtcCtc11AY.1000.000046
ORF1ab/nsp13499F499LTtcCtc11AY.1030.000006
ORF1ab/nsp13499F499FttCttT11AY.1040.001984
ORF1ab/nsp13499F499FttCttT11AY.1050.000643
ORF1ab/nsp13499F499FttCttT11AY.1110.000183
ORF1ab/nsp13499F499delTTC---11AY.1200.000037
ORF1ab/nsp13499F499FttCttT11AY.130.000161
ORF1ab/nsp13499F499LTtcCtc11AY.230.00007
ORF1ab/nsp13499F499FttCttT11AY.280.00189
ORF1ab/nsp13499F499FttCttT11AY.29.10.000221
ORF1ab/nsp13499F499FttCttT11AY.300.000396
ORF1ab/nsp13499F499LttCttA11AY.390.000025
ORF1ab/nsp13499F499FttCttT11AY.4.2.10.000149
ORF1ab/nsp13499F499LttCttA11AY.430.000004
ORF1ab/nsp13499F499delTTC---11AY.46.20.000635
ORF1ab/nsp13499F499FttCttT11AY.46.20.000635
ORF1ab/nsp13499F499FttCttT11AY.520.000814
ORF1ab/nsp13499F499FttCttT11AY.530.000288
ORF1ab/nsp13499F499FttCttT11AY.540.000095
ORF1ab/nsp13499F499FttCttT11AY.590.00053
ORF1ab/nsp13499F499LTtcCtc11AY.670.000464
ORF1ab/nsp13499F499FttCttT11AY.670.000464
ORF1ab/nsp13499F499delTTC---11AY.720.001361
ORF1ab/nsp13499F499FttCttT11AY.75.10.00018
ORF1ab/nsp13499F499FttCttT11AY.880.000884
ORF1ab/nsp13499F499FttCttT11AY.910.00073
ORF1ab/nsp13499F499delTTC---11AY.98.10.000048
ORF1ab/nsp13499F499LttCttA11B0.000128
ORF1ab/nsp13499F499CtTCtGT11B.10.000009
ORF1ab/nsp13499F499StTctCc11B.10.000009
ORF1ab/nsp13499F499YtTctAc11B.10.000009
ORF1ab/nsp13499F499FttCttT11B.1.1.10.000327
ORF1ab/nsp13499F499FttCttT11B.1.1.1210.002427
ORF1ab/nsp13499F499FttCttT11B.1.1.130.035714
ORF1ab/nsp13499F499delTTC---11B.1.1.1390.022727
ORF1ab/nsp13499F499CtTctGc11B.1.1.1610.003534
ORF1ab/nsp13499F499FttCttT11B.1.1.1740.003378
ORF1ab/nsp13499F499delTTC---11B.1.1.1920.002309
ORF1ab/nsp13499F499FttCttT11B.1.1.2080.012195
ORF1ab/nsp13499F499FttCttT11B.1.1.2410.00207
ORF1ab/nsp13499F499FttCttT11B.1.1.2420.043478
ORF1ab/nsp13499F499FttCttT11B.1.1.2680.014925
ORF1ab/nsp13499F499FttCttT11B.1.1.3160.000925
ORF1ab/nsp13499F499FttCttT11B.1.1.3180.000302
ORF1ab/nsp13499F499FttCttT11B.1.1.3420.0625
ORF1ab/nsp13499F499FttCttT11B.1.1.3450.043478
ORF1ab/nsp13499F499FttCttT11B.1.1.3470.018182
ORF1ab/nsp13499F499FttCttT11B.1.1.3480.000796
ORF1ab/nsp13499F499FttCttT11B.1.1.3540.004386
ORF1ab/nsp13499F499FttCttT11B.1.1.3590.027778
ORF1ab/nsp13499F499FttCttT11B.1.1.4300.041667
ORF1ab/nsp13499F499FttCttT11B.1.1.4620.008621
ORF1ab/nsp13499F499FttCttT11B.1.1.4640.001473
ORF1ab/nsp13499F499FttCttT11B.1.1.5280.004808
ORF1ab/nsp13499F499YtTctAc11B.1.1.70.000001
ORF1ab/nsp13499F499CtTctGc11B.1.1.70.000001
ORF1ab/nsp13499F499FttCttT11B.1.1.700.000341
ORF1ab/nsp13499F499FttCttT11B.1.110.30.000718
ORF1ab/nsp13499F499FttCttT11B.1.1200.007692
ORF1ab/nsp13499F499VTtcGtc11B.1.1600.000031
ORF1ab/nsp13499F499delTTC---11B.1.1770.000013
ORF1ab/nsp13499F499FttCttT11B.1.177.120.000152
ORF1ab/nsp13499F499FttCttT11B.1.177.40.000211
ORF1ab/nsp13499F499FttCttT11B.1.177.430.001477
ORF1ab/nsp13499F499LTtcCtc11B.1.177.430.001477
ORF1ab/nsp13499F499StTctCc11B.1.177.440.000519
ORF1ab/nsp13499F499FttCttT11B.1.177.550.002331
ORF1ab/nsp13499F499FttCttT11B.1.177.730.000566
ORF1ab/nsp13499F499FttCttT11B.1.177.740.015152
ORF1ab/nsp13499F499FttCttT11B.1.177.810.000189
ORF1ab/nsp13499F499delTTC---11B.1.177.830.001481
ORF1ab/nsp13499F499FttCttT11B.1.177.870.000728
ORF1ab/nsp13499F499delTTC---11B.1.177.90.001332
ORF1ab/nsp13499F499FttCttT11B.1.177.90.001332
ORF1ab/nsp13499F499del1Ttc-tc11B.1.20.000009
ORF1ab/nsp13499F499ITtcAtc11B.1.20.000009
ORF1ab/nsp13499F499FttCttT11B.1.214.20.0006
ORF1ab/nsp13499F499FttCttT11B.1.2370.004975
ORF1ab/nsp13499F499FttCttT11B.1.2390.001221
ORF1ab/nsp13499F499StTctCc11B.1.2430.00007
ORF1ab/nsp13499F499LTtcCtc11B.1.258.110.000396
ORF1ab/nsp13499F499FttCttT11B.1.258.140.00098
ORF1ab/nsp13499F499delTTC---11B.1.258.160.001637
ORF1ab/nsp13499F499FttCttT11B.1.258.170.000104
ORF1ab/nsp13499F499VTtcGtc11B.1.258.40.003448
ORF1ab/nsp13499F499FttCttT11B.1.3110.000275
ORF1ab/nsp13499F499FttCttT11B.1.3460.001311
ORF1ab/nsp13499F499LttCttG11B.1.3510.00003
ORF1ab/nsp13499F499FttCttT11B.1.3590.022727
ORF1ab/nsp13499F499FttCttT11B.1.36.100.004785
ORF1ab/nsp13499F499FttCttT11B.1.36.260.002857
ORF1ab/nsp13499F499FttCttT11B.1.36.270.000763
ORF1ab/nsp13499F499FttCttT11B.1.36.360.000602
ORF1ab/nsp13499F499FttCttT11B.1.36.380.001642
ORF1ab/nsp13499F499FttCttT11B.1.36.390.002217
ORF1ab/nsp13499F499FttCttT11B.1.3670.000792
ORF1ab/nsp13499F499FttCttT11B.1.4010.008197
ORF1ab/nsp13499F499FttCttT11B.1.4160.001269
ORF1ab/nsp13499F499FttCttT11B.1.4250.002994
ORF1ab/nsp13499F499LttCttG11B.1.4270.00005
ORF1ab/nsp13499F499LTtcCtc11B.1.4290.000024
ORF1ab/nsp13499F499FttCttT11B.1.4360.001029
ORF1ab/nsp13499F499FttCttT11B.1.4590.004082
ORF1ab/nsp13499F499LttCttA11B.1.466.20.000391
ORF1ab/nsp13499F499FttCttT11B.1.4680.005714
ORF1ab/nsp13499F499ITtcAtc11B.1.4730.019231
ORF1ab/nsp13499F499FttCttT11B.1.4990.00105
ORF1ab/nsp13499F499LttCttA11B.1.5260.000024
ORF1ab/nsp13499F499FttCttT11B.1.5610.000397
ORF1ab/nsp13499F499FttCttT11B.1.5810.009434
ORF1ab/nsp13499F499LTtcCtc11B.1.5820.000491
ORF1ab/nsp13499F499VTtcGtc11B.1.5950.000261
ORF1ab/nsp13499F499LttCttA11B.1.6090.000479
ORF1ab/nsp13499F499LTtcCtc11B.1.617.10.000129
ORF1ab/nsp13499F499StTctCc11B.1.617.20.000004
ORF1ab/nsp13499F499FttCttT11B.1.617.30.002985
ORF1ab/nsp13499F499LttCttA11B.1.6230.000536
ORF1ab/nsp13499F499FttCttT11B.1.6250.002353
ORF1ab/nsp13499F499delTTC---11B.1.6300.005236
ORF1ab/nsp13499F499FttCttT11B.1.6340.003425
ORF1ab/nsp13499F499LTtcCtc11B.1.6370.000073
ORF1ab/nsp13499F499FttCttT11B.1.6390.021739
ORF1ab/nsp13499F499FttCttT11B.1.80.001972
ORF1ab/nsp13499F499FttCttT11B.400.000364
ORF1ab/nsp13499F499delTTC---11C.170.055556
ORF1ab/nsp13499F499FttCttT11C.20.016129
ORF1ab/nsp13499F499LTtcCtc11C.230.005814
ORF1ab/nsp13499F499FttCttT11C.260.007353
ORF1ab/nsp13499F499FttCttT11C.360.000911
ORF1ab/nsp13499F499FttCttT11C.36.30.000567
ORF1ab/nsp13499F499FttCttT11K.20.04
ORF1ab/nsp13499F499FttCttT11L.30.003546
ORF1ab/nsp13499F499FttCttT11Q.20.000613
ORF1ab/nsp13499F499FttCttT11Q.30.000145
ORF1ab/nsp13499F499delTTC---11Q.80.000165
ORF1ab/nsp13499F499FttCttT11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.