CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 486 & Codon = tcC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13486S486SS5810SsyntcTtcC238315380.64540517692-17694

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13486S486StcTtcC15382383All0.000294
ORF1ab/nsp13486S486StcTtcC9951010B.1.617.20.003747
ORF1ab/nsp13486S486StcTtcC5803AY.40.000008
ORF1ab/nsp13486S486StcTtcC277277AY.430.001227
ORF1ab/nsp13486S486StcTtcC4747AY.440.000286
ORF1ab/nsp13486S486StcTtcC2335B.1.1.70.000021
ORF1ab/nsp13486S486StcTtcC2020AY.390.000494
ORF1ab/nsp13486S486StcTtcC1919AY.1020.000504
ORF1ab/nsp13486S486StcTtcC1919AY.98.10.00092
ORF1ab/nsp13486S486StcTtcC1616B.1.1.1271
ORF1ab/nsp13486S486StcTtcC1313AY.460.001353
ORF1ab/nsp13486S486StcTtcC1111AY.1030.000068
ORF1ab/nsp13486S486StcTtcC38AY.30.00003
ORF1ab/nsp13486S486StcTtcC78B.1.4290.000165
ORF1ab/nsp13486S486StcTtcC77AY.1190.000247
ORF1ab/nsp13486S486StcTtcC77B.1.5960.00061
ORF1ab/nsp13486S486StcTtcC55AY.1170.000423
ORF1ab/nsp13486S486StcTtcC55AY.840.002187
ORF1ab/nsp13486S486StcTtcC44AY.230.000279
ORF1ab/nsp13486S486StcTtcC44AY.50.000083
ORF1ab/nsp13486S486StcTtcC33AY.320.001597
ORF1ab/nsp13486S486StcTtcC33AY.330.0002
ORF1ab/nsp13486S486StcTtcC23AY.420.00008
ORF1ab/nsp13486S486StcTtcC33AY.450.000365
ORF1ab/nsp13486S486StcTtcC33AY.920.000862
ORF1ab/nsp13486S486StcTtcC33AY.980.000237
ORF1ab/nsp13486S486StcTtcC23B.10.000018
ORF1ab/nsp13486S486StcTtcC33B.1.1390.002199
ORF1ab/nsp13486S486StcTtcC12AY.1000.000046
ORF1ab/nsp13486S486StcTtcC22AY.1180.000125
ORF1ab/nsp13486S486StcTtcC22AY.250.000012
ORF1ab/nsp13486S486StcTtcC22AY.5.40.000553
ORF1ab/nsp13486S486StcTtcC12B.1.10.000018
ORF1ab/nsp13486S486StcTtcC22B.1.1770.000026
ORF1ab/nsp13486S486StcTtcC22B.1.2430.000139
ORF1ab/nsp13486S486StcTtcC22P.10.000032
ORF1ab/nsp13486S486StcTtcC11AY.1010.00049
ORF1ab/nsp13486S486StcTtcC11AY.1060.000335
ORF1ab/nsp13486S486StcTtcC11AY.1130.000142
ORF1ab/nsp13486S486StcTtcC11AY.270.000065
ORF1ab/nsp13486S486StcTtcC11AY.4.20.000022
ORF1ab/nsp13486S486StcTtcC11AY.560.001605
ORF1ab/nsp13486S486StcTtcC11AY.610.000105
ORF1ab/nsp13486S486StcTtcC11AY.740.000116
ORF1ab/nsp13486S486StcTtcC11AY.9.20.000037
ORF1ab/nsp13486S486StcTtcC11AY.950.000761
ORF1ab/nsp13486S486StcTtcC11B.1.1600.000031
ORF1ab/nsp13486S486StcTtcC11B.1.177.440.000519
ORF1ab/nsp13486S486StcTtcC11B.1.177.530.002392
ORF1ab/nsp13486S486StcTtcC11B.1.2410.000812
ORF1ab/nsp13486S486StcTtcC11B.1.360.000146