CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 428 & Codon = Ttt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13428L428FL5752FnonsynCttTtt54825482117518-17520

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13428L428FCttTtt54825482All0.001048
ORF1ab/nsp13428L428FCttTtt15731573B.1.1.70.001408
ORF1ab/nsp13428L428FCttTtt986986B.10.009031
ORF1ab/nsp13428L428FCttTtt648648B.1.5240.911392
ORF1ab/nsp13428L428FCttTtt437437B.1.3050.939785
ORF1ab/nsp13428L428FCttTtt251251B.1.1770.003305
ORF1ab/nsp13428L428FCttTtt147147B.1.20.001294
ORF1ab/nsp13428L428FCttTtt130130AY.40.000202
ORF1ab/nsp13428L428FCttTtt8080B.1.10.001451
ORF1ab/nsp13428L428FCttTtt7474B.1.2210.005256
ORF1ab/nsp13428L428FCttTtt6464P.10.001008
ORF1ab/nsp13428L428FCttTtt5353AY.440.000323
ORF1ab/nsp13428L428FCttTtt5353B.1.564.10.083596
ORF1ab/nsp13428L428FCttTtt5050B.1.1.580.268817
ORF1ab/nsp13428L428FCttTtt3939P.1.10.012389
ORF1ab/nsp13428L428FCttTtt3838B.1.1.2770.028832
ORF1ab/nsp13428L428FCttTtt3535D.20.002626
ORF1ab/nsp13428L428FCttTtt3333B.1.1.3280.559322
ORF1ab/nsp13428L428FCttTtt3333B.1.1600.001029
ORF1ab/nsp13428L428FCttTtt2929B.1.2340.003826
ORF1ab/nsp13428L428FCttTtt2929B.1.4290.000682
ORF1ab/nsp13428L428FCttTtt2424B.1.1.5060.888889
ORF1ab/nsp13428L428FCttTtt2424B.1.617.20.00009
ORF1ab/nsp13428L428FCttTtt2222B.1.1.250.012507
ORF1ab/nsp13428L428FCttTtt2121B.1.177.570.005901
ORF1ab/nsp13428L428FCttTtt2020B.1.438.10.002145
ORF1ab/nsp13428L428FCttTtt1919AY.39.10.000753
ORF1ab/nsp13428L428FCttTtt1919B.6.60.016889
ORF1ab/nsp13428L428FCttTtt1818C.390.339623
ORF1ab/nsp13428L428FCttTtt1616B.1.2430.001113
ORF1ab/nsp13428L428FCttTtt1616B.1.5960.001394
ORF1ab/nsp13428L428FCttTtt1515AY.29.10.003308
ORF1ab/nsp13428L428FCttTtt1414AY.1020.000371
ORF1ab/nsp13428L428FCttTtt1313B.1.3510.000386
ORF1ab/nsp13428L428FCttTtt1313Q.80.002144
ORF1ab/nsp13428L428FCttTtt1212B.1.177.560.008011
ORF1ab/nsp13428L428FCttTtt1212B.1.4200.125
ORF1ab/nsp13428L428FCttTtt1111B.1.3360.026829
ORF1ab/nsp13428L428FCttTtt1010AY.250.00006
ORF1ab/nsp13428L428FCttTtt1010AY.740.001156
ORF1ab/nsp13428L428FCttTtt1010B.1.5250.001132
ORF1ab/nsp13428L428FCttTtt1010B.1.5260.000235
ORF1ab/nsp13428L428FCttTtt99B.1.1.2740.045455
ORF1ab/nsp13428L428FCttTtt99B.1.1.5190.000357
ORF1ab/nsp13428L428FCttTtt99B.1.2580.000599
ORF1ab/nsp13428L428FCttTtt88B.1.177.330.013158
ORF1ab/nsp13428L428FCttTtt88B.1.3110.002197
ORF1ab/nsp13428L428FCttTtt88B.1.466.20.00313
ORF1ab/nsp13428L428FCttTtt77B.1.1.330.002946
ORF1ab/nsp13428L428FCttTtt77B.1.1110.008226
ORF1ab/nsp13428L428FCttTtt77B.1.2100.014925
ORF1ab/nsp13428L428FCttTtt77B.1.4330.022364
ORF1ab/nsp13428L428FCttTtt66AZ.20.004926
ORF1ab/nsp13428L428FCttTtt66B.1.1280.003812
ORF1ab/nsp13428L428FCttTtt66B.1.360.000875
ORF1ab/nsp13428L428FCttTtt66B.1.4040.007812
ORF1ab/nsp13428L428FCttTtt66P.1.140.000287
ORF1ab/nsp13428L428FCttTtt55AY.30.00005
ORF1ab/nsp13428L428FCttTtt55B.1.2400.001078
ORF1ab/nsp13428L428FCttTtt55B.1.3490.003574
ORF1ab/nsp13428L428FCttTtt55B.1.5820.002453
ORF1ab/nsp13428L428FCttTtt55P.20.000933
ORF1ab/nsp13428L428FCttTtt55Q.10.000632
ORF1ab/nsp13428L428FCttTtt44AY.1030.000025
ORF1ab/nsp13428L428FCttTtt44AY.390.000099
ORF1ab/nsp13428L428FCttTtt44AY.4.20.000087
ORF1ab/nsp13428L428FCttTtt44B.1.177.600.000874
ORF1ab/nsp13428L428FCttTtt44B.1.177.70.000659
ORF1ab/nsp13428L428FCttTtt44B.1.2390.004884
ORF1ab/nsp13428L428FCttTtt44B.1.4970.001259
ORF1ab/nsp13428L428FCttTtt44B.1.6370.000292
ORF1ab/nsp13428L428FCttTtt44N.50.007067
ORF1ab/nsp13428L428FCttTtt44P.1.20.004624
ORF1ab/nsp13428L428FCttTtt33AY.1190.000106
ORF1ab/nsp13428L428FCttTtt33B.1.1.3180.000905
ORF1ab/nsp13428L428FCttTtt33B.1.1.390.001529
ORF1ab/nsp13428L428FCttTtt33B.1.177.20.013636
ORF1ab/nsp13428L428FCttTtt33B.1.1920.027778
ORF1ab/nsp13428L428FCttTtt33B.1.4280.003061
ORF1ab/nsp13428L428FCttTtt33B.1.4700.004213
ORF1ab/nsp13428L428FCttTtt33B.1.5300.021429
ORF1ab/nsp13428L428FCttTtt33B.1.5510.003871
ORF1ab/nsp13428L428FCttTtt33B.1.5610.001191
ORF1ab/nsp13428L428FCttTtt33B.1.6090.001438
ORF1ab/nsp13428L428FCttTtt33B.230.008772
ORF1ab/nsp13428L428FCttTtt33C.350.002322
ORF1ab/nsp13428L428FCttTtt22A.2.5.20.003145
ORF1ab/nsp13428L428FCttTtt22AD.20.000438
ORF1ab/nsp13428L428FCttTtt22AY.16.10.00094
ORF1ab/nsp13428L428FCttTtt22AY.430.000009
ORF1ab/nsp13428L428FCttTtt22AY.610.00021
ORF1ab/nsp13428L428FCttTtt22AY.720.002721
ORF1ab/nsp13428L428FCttTtt22AY.9.20.000073
ORF1ab/nsp13428L428FCttTtt22AY.98.10.000097
ORF1ab/nsp13428L428FCttTtt22B0.000256
ORF1ab/nsp13428L428FCttTtt22B.1.1.280.000622
ORF1ab/nsp13428L428FCttTtt22B.1.1.3020.004149
ORF1ab/nsp13428L428FCttTtt22B.1.1.3110.000716
ORF1ab/nsp13428L428FCttTtt22B.1.1.3170.000823
ORF1ab/nsp13428L428FCttTtt22B.1.1.3480.001592
ORF1ab/nsp13428L428FCttTtt22B.1.1.3490.020619
ORF1ab/nsp13428L428FCttTtt22B.1.1.3720.001377
ORF1ab/nsp13428L428FCttTtt22B.1.1.4200.002012
ORF1ab/nsp13428L428FCttTtt22B.1.1.4320.002532
ORF1ab/nsp13428L428FCttTtt22B.1.1.4340.000697
ORF1ab/nsp13428L428FCttTtt22B.1.1.4400.023529
ORF1ab/nsp13428L428FCttTtt22B.1.1.5000.04
ORF1ab/nsp13428L428FCttTtt22B.1.1430.042553
ORF1ab/nsp13428L428FCttTtt22B.1.2450.0625
ORF1ab/nsp13428L428FCttTtt22B.1.258.170.000208
ORF1ab/nsp13428L428FCttTtt22B.1.2980.004228
ORF1ab/nsp13428L428FCttTtt22B.1.3690.00057
ORF1ab/nsp13428L428FCttTtt22B.1.3880.181818
ORF1ab/nsp13428L428FCttTtt22B.1.4270.000101
ORF1ab/nsp13428L428FCttTtt22B.1.4620.014493
ORF1ab/nsp13428L428FCttTtt22B.1.5660.038462
ORF1ab/nsp13428L428FCttTtt22B.1.5970.009259
ORF1ab/nsp13428L428FCttTtt22B.30.001661
ORF1ab/nsp13428L428FCttTtt22R.10.00018
ORF1ab/nsp13428L428FCttTtt11AE.80.000489
ORF1ab/nsp13428L428FCttTtt11AY.1110.000183
ORF1ab/nsp13428L428FCttTtt11AY.140.000088
ORF1ab/nsp13428L428FCttTtt11AY.190.00114
ORF1ab/nsp13428L428FCttTtt11AY.200.000039
ORF1ab/nsp13428L428FCttTtt11AY.260.000028
ORF1ab/nsp13428L428FCttTtt11AY.3.10.000085
ORF1ab/nsp13428L428FCttTtt11AY.350.000233
ORF1ab/nsp13428L428FCttTtt11AY.4.50.000107
ORF1ab/nsp13428L428FCttTtt11AY.450.000122
ORF1ab/nsp13428L428FCttTtt11AY.460.000104
ORF1ab/nsp13428L428FCttTtt11AY.470.000031
ORF1ab/nsp13428L428FCttTtt11AY.60.000041
ORF1ab/nsp13428L428FCttTtt11AY.690.000187
ORF1ab/nsp13428L428FCttTtt11AY.730.000665
ORF1ab/nsp13428L428FCttTtt11AY.75.10.00018
ORF1ab/nsp13428L428FCttTtt11AY.980.000079
ORF1ab/nsp13428L428FCttTtt11B.1.1.130.035714
ORF1ab/nsp13428L428FCttTtt11B.1.1.1980.001468
ORF1ab/nsp13428L428FCttTtt11B.1.1.2180.007692
ORF1ab/nsp13428L428FCttTtt11B.1.1.2200.001859
ORF1ab/nsp13428L428FCttTtt11B.1.1.3060.000438
ORF1ab/nsp13428L428FCttTtt11B.1.1.3150.008475
ORF1ab/nsp13428L428FCttTtt11B.1.1.3160.000925
ORF1ab/nsp13428L428FCttTtt11B.1.1.3690.000446
ORF1ab/nsp13428L428FCttTtt11B.1.1.3880.045455
ORF1ab/nsp13428L428FCttTtt11B.1.1.3890.006061
ORF1ab/nsp13428L428FCttTtt11B.1.1.4190.007407
ORF1ab/nsp13428L428FCttTtt11B.1.1.4330.001425
ORF1ab/nsp13428L428FCttTtt11B.1.1.4480.002033
ORF1ab/nsp13428L428FCttTtt11B.1.1.450.014085
ORF1ab/nsp13428L428FCttTtt11B.1.1160.011628
ORF1ab/nsp13428L428FCttTtt11B.1.1390.000733
ORF1ab/nsp13428L428FCttTtt11B.1.1510.011111
ORF1ab/nsp13428L428FCttTtt11B.1.1570.002985
ORF1ab/nsp13428L428FCttTtt11B.1.160.300.002976
ORF1ab/nsp13428L428FCttTtt11B.1.1700.00431
ORF1ab/nsp13428L428FCttTtt11B.1.177.210.000076
ORF1ab/nsp13428L428FCttTtt11B.1.177.380.010417
ORF1ab/nsp13428L428FCttTtt11B.1.177.40.000211
ORF1ab/nsp13428L428FCttTtt11B.1.177.420.000894
ORF1ab/nsp13428L428FCttTtt11B.1.177.730.000566
ORF1ab/nsp13428L428FCttTtt11B.1.177.770.000726
ORF1ab/nsp13428L428FCttTtt11B.1.177.810.000189
ORF1ab/nsp13428L428FCttTtt11B.1.177.870.000728
ORF1ab/nsp13428L428FCttTtt11B.1.1890.004292
ORF1ab/nsp13428L428FCttTtt11B.1.1900.01
ORF1ab/nsp13428L428FCttTtt11B.1.214.30.007143
ORF1ab/nsp13428L428FCttTtt11B.1.2360.002053
ORF1ab/nsp13428L428FCttTtt11B.1.2410.000812
ORF1ab/nsp13428L428FCttTtt11B.1.2600.003344
ORF1ab/nsp13428L428FCttTtt11B.1.2790.000514
ORF1ab/nsp13428L428FCttTtt11B.1.3400.004292
ORF1ab/nsp13428L428FCttTtt11B.1.36.10.00114
ORF1ab/nsp13428L428FCttTtt11B.1.36.170.000494
ORF1ab/nsp13428L428FCttTtt11B.1.3620.001541
ORF1ab/nsp13428L428FCttTtt11B.1.3960.000706
ORF1ab/nsp13428L428FCttTtt11B.1.4000.000429
ORF1ab/nsp13428L428FCttTtt11B.1.4090.000781
ORF1ab/nsp13428L428FCttTtt11B.1.4170.028571
ORF1ab/nsp13428L428FCttTtt11B.1.4260.001009
ORF1ab/nsp13428L428FCttTtt11B.1.4360.001029
ORF1ab/nsp13428L428FCttTtt11B.1.4390.005917
ORF1ab/nsp13428L428FCttTtt11B.1.4430.004673
ORF1ab/nsp13428L428FCttTtt11B.1.4590.004082
ORF1ab/nsp13428L428FCttTtt11B.1.4660.023256
ORF1ab/nsp13428L428FCttTtt11B.1.5560.007519
ORF1ab/nsp13428L428FCttTtt11B.1.5600.00463
ORF1ab/nsp13428L428FCttTtt11B.1.5650.00081
ORF1ab/nsp13428L428FCttTtt11B.1.5800.004065
ORF1ab/nsp13428L428FCttTtt11B.1.5950.000261
ORF1ab/nsp13428L428FCttTtt11B.1.595.30.026316
ORF1ab/nsp13428L428FCttTtt11B.1.617.10.000129
ORF1ab/nsp13428L428FCttTtt11B.1.6210.000089
ORF1ab/nsp13428L428FCttTtt11B.1.6360.006711
ORF1ab/nsp13428L428FCttTtt11B.1.80.001972
ORF1ab/nsp13428L428FCttTtt11B.1.810.021277
ORF1ab/nsp13428L428FCttTtt11B.370.028571
ORF1ab/nsp13428L428FCttTtt11B.4.10.018868
ORF1ab/nsp13428L428FCttTtt11B.4.50.011905
ORF1ab/nsp13428L428FCttTtt11B.60.00091
ORF1ab/nsp13428L428FCttTtt11C.36.30.000567
ORF1ab/nsp13428L428FCttTtt11C.370.000116
ORF1ab/nsp13428L428FCttTtt11D.30.005917
ORF1ab/nsp13428L428FCttTtt11P.1.150.000232
ORF1ab/nsp13428L428FCttTtt11P.1.70.000319
ORF1ab/nsp13428L428FCttTtt11Q.30.000145