CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 416 & Codon = Gca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13416T416AT5740AnonsynAcaGca9797117482-17484

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13416T416AAcaGca9797All0.000019
ORF1ab/nsp13416T416AAcaGca2121B0.002684
ORF1ab/nsp13416T416AAcaGca1010B.10.000092
ORF1ab/nsp13416T416AAcaGca99B.1.1.70.000008
ORF1ab/nsp13416T416AAcaGca77B.1.177.730.003964
ORF1ab/nsp13416T416AAcaGca55AY.1030.000031
ORF1ab/nsp13416T416AAcaGca55AY.40.000008
ORF1ab/nsp13416T416AAcaGca55B.1.1.630.001929
ORF1ab/nsp13416T416AAcaGca44AY.440.000024
ORF1ab/nsp13416T416AAcaGca33AY.5.30.001012
ORF1ab/nsp13416T416AAcaGca33B.1.20.000026
ORF1ab/nsp13416T416AAcaGca33Q.10.000379
ORF1ab/nsp13416T416AAcaGca220.111111
ORF1ab/nsp13416T416AAcaGca22AY.980.000158
ORF1ab/nsp13416T416AAcaGca22B.1.4270.000101
ORF1ab/nsp13416T416AAcaGca22P.10.000032
ORF1ab/nsp13416T416AAcaGca11AY.1000.000046
ORF1ab/nsp13416T416AAcaGca11AY.1190.000035
ORF1ab/nsp13416T416AAcaGca11AY.230.00007
ORF1ab/nsp13416T416AAcaGca11AY.250.000006
ORF1ab/nsp13416T416AAcaGca11AY.30.00001
ORF1ab/nsp13416T416AAcaGca11AY.39.10.00004
ORF1ab/nsp13416T416AAcaGca11AY.430.000004
ORF1ab/nsp13416T416AAcaGca11B.1.1600.000031
ORF1ab/nsp13416T416AAcaGca11B.1.3510.00003
ORF1ab/nsp13416T416AAcaGca11B.1.4290.000024
ORF1ab/nsp13416T416AAcaGca11B.1.5770.000687
ORF1ab/nsp13416T416AAcaGca11B.1.5990.00365
ORF1ab/nsp13416T416AAcaGca11B.1.617.20.000004
ORF1ab/nsp13416T416AAcaGca11Q.80.000165