CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 402 & Codon = Tct

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13402P402SP5726SnonsynCctTct156715610.99617117440-17442

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13402P402SCctTct15611567All0.000299
ORF1ab/nsp13402P402SCctTct454459B.1.1.70.000406
ORF1ab/nsp13402P402SCctTct349349B.1.1600.010884
ORF1ab/nsp13402P402SCctTct220220B.1.160.240.973451
ORF1ab/nsp13402P402SCctTct6767B.1.1770.000882
ORF1ab/nsp13402P402SCctTct4646B.1.20.000405
ORF1ab/nsp13402P402SCctTct4242B.10.000385
ORF1ab/nsp13402P402SCctTct3838P.50.520548
ORF1ab/nsp13402P402SCctTct2424B.1.2580.001597
ORF1ab/nsp13402P402SCctTct1919B.1.177.770.013798
ORF1ab/nsp13402P402SCctTct1818B.1.10.000327
ORF1ab/nsp13402P402SCctTct1717AY.40.000026
ORF1ab/nsp13402P402SCctTct1415P.10.000221
ORF1ab/nsp13402P402SCctTct1212AY.250.000072
ORF1ab/nsp13402P402SCctTct99AY.60.00037
ORF1ab/nsp13402P402SCctTct88B.1.617.20.00003
ORF1ab/nsp13402P402SCctTct77D.20.000525
ORF1ab/nsp13402P402SCctTct66A0.002322
ORF1ab/nsp13402P402SCctTct66B.1.1.3050.023166
ORF1ab/nsp13402P402SCctTct66B.1.2430.000418
ORF1ab/nsp13402P402SCctTct55AY.1030.000031
ORF1ab/nsp13402P402SCctTct55B.1.3560.008636
ORF1ab/nsp13402P402SCctTct44B.1.1.2140.000222
ORF1ab/nsp13402P402SCctTct44B.1.3670.00317
ORF1ab/nsp13402P402SCctTct44B.1.5610.001588
ORF1ab/nsp13402P402SCctTct44Q.40.001819
ORF1ab/nsp13402P402SCctTct33A.270.004967
ORF1ab/nsp13402P402SCctTct33AY.30.00003
ORF1ab/nsp13402P402SCctTct33AY.430.000013
ORF1ab/nsp13402P402SCctTct33AY.440.000018
ORF1ab/nsp13402P402SCctTct33B.1.1.4340.001046
ORF1ab/nsp13402P402SCctTct33B.1.1.5190.000119
ORF1ab/nsp13402P402SCctTct33B.1.1.580.016129
ORF1ab/nsp13402P402SCctTct33B.1.130.007126
ORF1ab/nsp13402P402SCctTct33B.1.177.810.000568
ORF1ab/nsp13402P402SCctTct33B.1.177.860.00055
ORF1ab/nsp13402P402SCctTct33B.1.2320.001612
ORF1ab/nsp13402P402SCctTct33B.1.2400.000647
ORF1ab/nsp13402P402SCctTct33B.1.5250.000339
ORF1ab/nsp13402P402SCctTct33B.1.6370.000219
ORF1ab/nsp13402P402SCctTct33P.1.140.000143
ORF1ab/nsp13402P402SCctTct33Q.80.000495
ORF1ab/nsp13402P402SCctTct33R.10.00027
ORF1ab/nsp13402P402SCctTct22A.2.50.000998
ORF1ab/nsp13402P402SCctTct22AY.1050.001286
ORF1ab/nsp13402P402SCctTct22AY.200.000078
ORF1ab/nsp13402P402SCctTct22AY.3.10.000171
ORF1ab/nsp13402P402SCctTct22AY.50.000041
ORF1ab/nsp13402P402SCctTct22B0.000256
ORF1ab/nsp13402P402SCctTct22B.1.1.2160.001781
ORF1ab/nsp13402P402SCctTct22B.1.1.3160.00185
ORF1ab/nsp13402P402SCctTct22B.1.1530.037736
ORF1ab/nsp13402P402SCctTct22B.1.2790.001027
ORF1ab/nsp13402P402SCctTct22B.1.3200.002491
ORF1ab/nsp13402P402SCctTct22B.1.36.100.009569
ORF1ab/nsp13402P402SCctTct22B.1.4270.000101
ORF1ab/nsp13402P402SCctTct22B.1.5030.004975
ORF1ab/nsp13402P402SCctTct22B.1.5170.000854
ORF1ab/nsp13402P402SCctTct22B.1.5260.000047
ORF1ab/nsp13402P402SCctTct22B.1.617.10.000258
ORF1ab/nsp13402P402SCctTct22B.30.001661
ORF1ab/nsp13402P402SCctTct22B.4.50.02381
ORF1ab/nsp13402P402SCctTct22B.530.023529
ORF1ab/nsp13402P402SCctTct22C.160.002121
ORF1ab/nsp13402P402SCctTct22N.60.014184
ORF1ab/nsp13402P402SCctTct22P.20.000373
ORF1ab/nsp13402P402SCctTct11A.20.000662
ORF1ab/nsp13402P402SCctTct11AD.20.000219
ORF1ab/nsp13402P402SCctTct11AK.20.045455
ORF1ab/nsp13402P402SCctTct11AU.30.00211
ORF1ab/nsp13402P402SCctTct11AY.1000.000046
ORF1ab/nsp13402P402SCctTct11AY.1020.000027
ORF1ab/nsp13402P402SCctTct11AY.1200.000037
ORF1ab/nsp13402P402SCctTct11AY.140.000088
ORF1ab/nsp13402P402SCctTct11AY.29.10.000221
ORF1ab/nsp13402P402SCctTct11AY.330.000067
ORF1ab/nsp13402P402SCctTct11AY.340.000097
ORF1ab/nsp13402P402SCctTct11AY.350.000233
ORF1ab/nsp13402P402SCctTct11AY.390.000025
ORF1ab/nsp13402P402SCctTct11AY.39.1.10.000725
ORF1ab/nsp13402P402SCctTct11AY.4.20.000022
ORF1ab/nsp13402P402SCctTct11AY.540.000095
ORF1ab/nsp13402P402SCctTct11AY.570.000656
ORF1ab/nsp13402P402SCctTct11AY.750.000056
ORF1ab/nsp13402P402SCctTct11AY.760.004831
ORF1ab/nsp13402P402SCctTct11AY.900.000684
ORF1ab/nsp13402P402SCctTct11B.1.1.100.001115
ORF1ab/nsp13402P402SCctTct11B.1.1.1530.001095
ORF1ab/nsp13402P402SCctTct11B.1.1.1700.001247
ORF1ab/nsp13402P402SCctTct11B.1.1.2270.004348
ORF1ab/nsp13402P402SCctTct11B.1.1.2280.003049
ORF1ab/nsp13402P402SCctTct11B.1.1.250.000569
ORF1ab/nsp13402P402SCctTct11B.1.1.2610.008621
ORF1ab/nsp13402P402SCctTct11B.1.1.280.000311
ORF1ab/nsp13402P402SCctTct11B.1.1.2980.000862
ORF1ab/nsp13402P402SCctTct11B.1.1.330.000421
ORF1ab/nsp13402P402SCctTct11B.1.1.370.000193
ORF1ab/nsp13402P402SCctTct11B.1.1.4020.011111
ORF1ab/nsp13402P402SCctTct11B.1.1.4090.002833
ORF1ab/nsp13402P402SCctTct11B.1.1.460.004367
ORF1ab/nsp13402P402SCctTct11B.1.1.5230.001563
ORF1ab/nsp13402P402SCctTct11B.1.110.30.000718
ORF1ab/nsp13402P402SCctTct11B.1.1110.001175
ORF1ab/nsp13402P402SCctTct11B.1.1390.000733
ORF1ab/nsp13402P402SCctTct11B.1.160.300.002976
ORF1ab/nsp13402P402SCctTct11B.1.1650.011905
ORF1ab/nsp13402P402SCctTct11B.1.177.200.001517
ORF1ab/nsp13402P402SCctTct11B.1.177.230.003236
ORF1ab/nsp13402P402SCctTct11B.1.177.480.003125
ORF1ab/nsp13402P402SCctTct11B.1.177.530.002392
ORF1ab/nsp13402P402SCctTct11B.1.177.540.000606
ORF1ab/nsp13402P402SCctTct11B.1.2180.005155
ORF1ab/nsp13402P402SCctTct11B.1.258.110.000396
ORF1ab/nsp13402P402SCctTct11B.1.2600.003344
ORF1ab/nsp13402P402SCctTct11B.1.3510.00003
ORF1ab/nsp13402P402SCctTct11B.1.360.000146
ORF1ab/nsp13402P402SCctTct11B.1.36.360.000602
ORF1ab/nsp13402P402SCctTct11B.1.3980.002976
ORF1ab/nsp13402P402SCctTct11B.1.4030.003268
ORF1ab/nsp13402P402SCctTct11B.1.4040.001302
ORF1ab/nsp13402P402SCctTct11B.1.429.10.012048
ORF1ab/nsp13402P402SCctTct11B.1.438.10.000107
ORF1ab/nsp13402P402SCctTct11B.1.4480.002625
ORF1ab/nsp13402P402SCctTct11B.1.4700.001404
ORF1ab/nsp13402P402SCctTct11B.1.499.10.111111
ORF1ab/nsp13402P402SCctTct11B.1.5640.000426
ORF1ab/nsp13402P402SCctTct11B.1.5960.000087
ORF1ab/nsp13402P402SCctTct11B.1.5970.00463
ORF1ab/nsp13402P402SCctTct11B.1.6090.000479
ORF1ab/nsp13402P402SCctTct11B.1.6210.000089
ORF1ab/nsp13402P402SCctTct11B.1.6230.000536
ORF1ab/nsp13402P402SCctTct11B.1.6310.003367
ORF1ab/nsp13402P402SCctTct11B.1.80.001972
ORF1ab/nsp13402P402SCctTct11B.1.840.020833
ORF1ab/nsp13402P402SCctTct11B.4.70.010101
ORF1ab/nsp13402P402SCctTct11B.400.000364
ORF1ab/nsp13402P402SCctTct11B.610.005747
ORF1ab/nsp13402P402SCctTct11C.370.000116
ORF1ab/nsp13402P402SCctTct11D.50.004975
ORF1ab/nsp13402P402SCctTct11P.1.100.000269
ORF1ab/nsp13402P402SCctTct11P.1.170.000162
ORF1ab/nsp13402P402SCctTct11W.10.008696