CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 392 & Codon = cgC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13392R392RR5716RsyncgTcgC3211720.53582617410-17412

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13392R392RcgTcgC172321All0.000033
ORF1ab/nsp13392R392RcgTcgC9131B.1.1.70.000008
ORF1ab/nsp13392R392RcgTcgC5757AY.430.000253
ORF1ab/nsp13392R392RcgTcgC3939B.1.6230.020923
ORF1ab/nsp13392R392RcgTcgC1818AY.99.20.001659
ORF1ab/nsp13392R392RcgTcgC115B.1.1600.000031
ORF1ab/nsp13392R392RcgTcgC78B.1.617.20.000026
ORF1ab/nsp13392R392RcgTcgC67AY.250.000036
ORF1ab/nsp13392R392RcgTcgC57AY.40.000008
ORF1ab/nsp13392R392RcgTcgC36B.1.10.000054
ORF1ab/nsp13392R392RcgTcgC44AY.440.000024
ORF1ab/nsp13392R392RcgTcgC33AY.30.00003
ORF1ab/nsp13392R392RcgTcgC22B.1.1.4200.002012
ORF1ab/nsp13392R392RcgTcgC22B.1.6210.000177
ORF1ab/nsp13392R392RcgTcgC11AY.1020.000027
ORF1ab/nsp13392R392RcgTcgC11AY.1110.000183
ORF1ab/nsp13392R392RcgTcgC11AY.1190.000035
ORF1ab/nsp13392R392RcgTcgC11AY.320.000532
ORF1ab/nsp13392R392RcgTcgC11AY.4.20.000022
ORF1ab/nsp13392R392RcgTcgC11AY.4.2.10.000149
ORF1ab/nsp13392R392RcgTcgC11AY.50.000021
ORF1ab/nsp13392R392RcgTcgC11AY.750.000056
ORF1ab/nsp13392R392RcgTcgC11AY.9.20.000037
ORF1ab/nsp13392R392RcgTcgC11AY.98.10.000048
ORF1ab/nsp13392R392RcgTcgC11B.1.1.2220.000204
ORF1ab/nsp13392R392RcgTcgC11B.1.20.000009
ORF1ab/nsp13392R392RcgTcgC11B.1.2410.000812
ORF1ab/nsp13392R392RcgTcgC11D.20.000075
ORF1ab/nsp13392R392RcgTcgC11P.10.000016
ORF1ab/nsp13392R392RcgTcgC11P.1.140.000048